EBG00000313339 - n.1173A>C
Drug resistance types
37 Sensitive
8 RR-TB
5 HR-TB
18 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 20 |
| lineage4.1.2.1 | 7 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4 | 8 |
| lineage3 | 3 |
| lineage4.1.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.7 | 2 |
| 8 | |
| lineage4.8.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 7 |
| lineage4.9 | 10 |
| lineage4.1.1.3 | 2 |
| lineage2.2 | 4 |
| lineage4.3.2.1 | 4 |
| lineage4.3.4.2 | 1 |
| lineage5.1.1 | 1 |
| La1.8.1 | 7 |
| lineage4;lineage2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4;La1 | 1 |
| lineage2.2.1.1 | 2 |
| La1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 6 |
| lineage1.1.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage6 | 1 |
| lineage4.1.4;lineage2.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 126 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397642 | RR-TB | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397770 | Other | lineage4.7 | None | SRR6153036 | Other | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6981912 | Sensitive | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982070 | RR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR5087486 | Other | La1.8.1 | None | ERR5162108 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1023527 | RR-TB | lineage4 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR4187641 | Other | lineage4;La1 | None | ERR144568 | Pre-XDR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4187921 | Other | None | ERR4798470 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4188372 | RR-TB | La1.8.1 | None | ERR4769479 | Other | La1.3 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769423 | Other | La1.3 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786828 | MDR-TB | lineage4.1.4;lineage2.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11871413 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR20970047 | Sensitive | lineage4.5 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR176771 | Sensitive | None | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR2179785 | Sensitive | lineage4.5 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR2229197 | Sensitive | lineage4 | None | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR216929 | Sensitive | lineage4.3.4.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | SRR5341460 | Other | lineage3 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5341288 | Pre-XDR-TB | lineage3 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None |
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