EBG00000313325 - n.1199C>G
Drug resistance types
121 Sensitive
7 RR-TB
6 HR-TB
14 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage5.1.2 | 1 |
| lineage4.9 | 116 |
| La1.8.1 | 2 |
| La1.8.2 | 2 |
| lineage1.1.2 | 9 |
| lineage5.1.3 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1 | 23 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3 | 8 |
| lineage4.9.1 | 1 |
| lineage6.2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.2.1 | 2 |
| lineage3.1;lineage4 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.6 | 1 |
| lineage3.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815985 | Other | lineage5.1.2 | None | SRR13861320 | Sensitive | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR13861548 | Sensitive | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR5311095 | Other | La1.8.1 | None | SRR13861218 | Sensitive | lineage4.9 | None | SRR13861408 | Sensitive | lineage4.9 | None | SRR13861561 | Sensitive | lineage4.9 | None | SRR13861197 | Sensitive | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR13861713 | Other | lineage4.9 | None | SRR13861368 | Sensitive | lineage4.9 | None | ERR5979791 | Sensitive | lineage4.9 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR13861439 | Sensitive | lineage4.9 | None | SRR13861451 | Sensitive | lineage4.9 | None | ERR4188072 | Sensitive | lineage4.9 | None | SRR13861316 | Sensitive | lineage4.9 | None | SRR13861469 | Sensitive | lineage4.9 | None | SRR638895 | Sensitive | lineage4.9 | None | SRR13861365 | Sensitive | lineage4.9 | None | SRR19303791 | Sensitive | lineage5.1.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR13861409 | HR-TB | lineage4.9 | None | SRR13861729 | Sensitive | lineage4.9 | None | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR5341346 | Sensitive | lineage3 | None | SRR15315833 | Sensitive | lineage4.9 | None | ERR126611 | Sensitive | lineage4.9.1 | None | ERR400350 | Sensitive | lineage4.9 | None | SRR13861203 | Sensitive | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR12420294 | MDR-TB | lineage2.2.1 | None | ERR1140795 | Sensitive | lineage6.2.1 | None | SRR10869015 | Sensitive | lineage4.8 | None | SRR13861346 | Sensitive | lineage4.9 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | ERR6866046 | Sensitive | lineage4.1.1.3 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR14781861 | MDR-TB | lineage4.2.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | SRR6045162 | Sensitive | lineage4.9 | None | ERR4828772 | HR-TB | lineage2.2.1 | None | SRR14179701 | Sensitive | lineage4.1.2.1 | None | ERR5979817 | Sensitive | lineage4.9 | None | SRR13861276 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | SRR13861475 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11348198 | Sensitive | lineage1.1.2 | None | ERR9786392 | Sensitive | lineage4.3.4.1 | None | SRR1168955 | Sensitive | lineage4.2;lineage4.9 | None | SRR1173014 | MDR-TB | lineage3 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR13861222 | Sensitive | lineage4.9 | None | SRR13861588 | Other | lineage4.9 | None | SRR12420692 | MDR-TB | lineage2.2.1 | None | SRR13861292 | Sensitive | lineage4.9 | None | ERR3283034 | Sensitive | lineage4.9 | None | SRR13861484 | Sensitive | lineage4.9 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR6896576 | Sensitive | lineage2.2.1 | None | SRR13861585 | Other | lineage4.9 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861177 | Other | lineage4.9 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR4815898 | Other | lineage3 | None | SRR13861737 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861722 | Sensitive | lineage4.9 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR560439 | Other | lineage4.9 | None | SRR13861199 | Sensitive | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861590 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR6149874 | Other | La1.8.2 | None | ERR3797078 | Sensitive | lineage4.9 | None | SRR13861148 | Other | lineage4.9 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR2510807 | Sensitive | lineage4.6 | None | ERR4829202 | Sensitive | lineage3 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861170 | Other | lineage4.9 | None | SRR13861178 | Sensitive | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | SRR13861234 | HR-TB | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | ERR867519 | Other | lineage4.3.3 | None | SRR13861618 | Sensitive | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | ERR9891984 | Other | lineage6.3.1 | None | SRR13861138 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR13861165 | HR-TB | lineage4.9 | None | ERR1140771 | Sensitive | lineage2.2.1 | None | SRR10869138 | Sensitive | lineage2.2.1 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | SRR13861216 | Sensitive | lineage4.9 | None | SRR13861233 | Sensitive | lineage4.9 | None | SRR13861501 | Sensitive | lineage4.9 | None | SRR13861425 | Other | lineage4.9 | None | ERR5979784 | Other | lineage4.9 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | SAMN02598978 | Other | lineage1.1.2 | None | SRR1166181 | Sensitive | lineage4.2.1 | None | SRR13861520 | Other | lineage4.9 | None | SRR13861151 | Sensitive | lineage4.9 | None | SRR13861277 | Sensitive | lineage4.9 | None | SRR13861508 | Other | lineage4.9 | None | SRR13861599 | Other | lineage4.9 | None | SRR13861443 | Other | lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4799636 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861460 | Sensitive | lineage4.9 | None | SRR13861275 | Other | lineage4.9 | None | SRR13861321 | Sensitive | lineage4.9 | None | SRR13861488 | Sensitive | lineage4.9 | None | SRR13861605 | Sensitive | lineage4.9 | None | SRR13861140 | HR-TB | lineage4.9 | None | SRR13861472 | Other | lineage4.9 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | SRR13861169 | Sensitive | lineage4.9 | None | SRR13861563 | Sensitive | lineage4.9 | None | SRR13861603 | Sensitive | lineage4.9 | None | SRR13861549 | Other | lineage4.9 | None | SRR13861736 | Sensitive | lineage4.9 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR13861498 | Other | lineage4.9 | None | ERR2510831 | Other | lineage4.3.3 | None | SRR13861437 | Sensitive | lineage4.9 | None | SRR7131160 | Sensitive | lineage3 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR10305656 | Other | lineage2.2.1 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR6359073 | Sensitive | lineage4.9 | None | SRR13861287 | Sensitive | lineage4.9 | None | ERR4828764 | Sensitive | lineage2.2.1 | None | ERR4024562 | Sensitive | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR13861194 | Sensitive | lineage4.9 | None | SRR13861543 | Sensitive | lineage4.9 | None | SRR13861547 | Sensitive | lineage4.9 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861560 | Other | lineage4.9 | None | SRR13861620 | Sensitive | lineage4.9 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR13861262 | Other | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | SRR7069638 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861424 | Sensitive | lineage4.9 | None | SRR13861571 | Sensitive | lineage4.9 | None | SRR13861629 | Sensitive | lineage4.9 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR13861615 | Sensitive | lineage4.9 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR13861492 | Sensitive | lineage4.9 | None | ERR3283053 | Sensitive | lineage4.9 | None | SRR11348155 | Sensitive | lineage1.1.2 | None | SRR13861524 | Sensitive | lineage4.9 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172267 | Sensitive | lineage1.1.2 | None | ERR4596906 | Sensitive | lineage1.1.2 | None |
|---|
