EBG00000313325 - n.1199C>G


Drug resistance types
121 Sensitive 6 RR-TB 6 HR-TB 15 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 45 Other
lineage Counts
lineage Count
lineage4.9 116
lineage3 8
lineage2.2.1 23
lineage4.1.2.1 4
lineage1.1.2 9
lineage4.3.4.2.1 3
lineage4.8 2
lineage4.1.2 3
lineage4.3.3 4
lineage4.3.4.1;lineage4.9 1
lineage4.6.1.1 1
lineage4.2.1 2
La1.7;lineage4.9 1
lineage3.1;lineage4 1
lineage3.1.1 1
La1.8.1 2
lineage5.1.2 1
La1.8.2 2
lineage4.4.1.1.1 3
lineage5.1.3 1
lineage2.2.2 1
lineage4.9.1 1
lineage6.2.1 1
lineage4.6.3 1
lineage4.1.1.3 2
lineage4.6 1
lineage4.3.4.1 1
lineage6.3.1 1
lineage5.1.1 1
lineage4.3.2.1 1
lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13861218 Sensitive lineage4.9 None
SRR13861605 Sensitive lineage4.9 None
SRR1173014 MDR-TB lineage3 None
ERR4829238 Sensitive lineage3 None
SRR13861492 Sensitive lineage4.9 None
ERR3468789 Sensitive lineage4.9 None
ERR1873557 Pre-XDR-TB lineage2.2.1 None
SRR13861508 Other lineage4.9 None
SRR14179701 Sensitive lineage4.1.2.1 None
SRR13861618 Sensitive lineage4.9 None
SRR6896576 Sensitive lineage2.2.1 None
SRR13861588 Other lineage4.9 None
ERR5979784 Other lineage4.9 None
SRR13861194 Sensitive lineage4.9 None
SRR13861615 Sensitive lineage4.9 None
ERR4596906 Sensitive lineage1.1.2 None
ERR323061 Sensitive lineage4.9 None
SRR13861284 RR-TB lineage4.9 None
SRR13861277 Sensitive lineage4.9 None
SRR13861484 Sensitive lineage4.9 None
SRR7131122 Other lineage2.2.1 None
ERR245790 Sensitive lineage4.3.4.2.1 None
ERR473311 Sensitive lineage4.9 None
SRR13861197 Sensitive lineage4.9 None
SRR6045162 Sensitive lineage4.9 None
SRR13861222 Sensitive lineage4.9 None
SRR13861713 Other lineage4.9 None
SRR13861469 Sensitive lineage4.9 None
SRR13861451 Sensitive lineage4.9 None
SRR13861458 MDR-TB lineage4.9 None
SRR13861177 Other lineage4.9 None
SRR13861620 Sensitive lineage4.9 None
SRR13861316 Sensitive lineage4.9 None
SRR13861603 Sensitive lineage4.9 None
SRR13861737 Other lineage4.9 None
SRR11342680 Other lineage4.8 None
SRR7131114 Other lineage4.1.2 None
SRR13861439 Sensitive lineage4.9 None
SRR13861560 Other lineage4.9 None
SRR13861548 Sensitive lineage4.9 None
ERR2510831 Other lineage4.3.3 None
ERR3797078 Sensitive lineage4.9 None
SRR13861424 Sensitive lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR13861409 HR-TB lineage4.9 None
SRR13861149 RR-TB lineage4.9 None
SRR13861321 Sensitive lineage4.9 None
SAMN02599089 MDR-TB lineage3 None
ERR4820650 Sensitive lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR15315833 Sensitive lineage4.9 None
ERR400350 Sensitive lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
ERR323067 Sensitive lineage4.3.4.2.1 None
ERR3078008 MDR-TB lineage4.6.1.1 None
SRR13861736 Sensitive lineage4.9 None
SRR12420294 MDR-TB lineage2.2.1 None
ERR4596937 Sensitive lineage1.1.2 None
SRR1166181 Sensitive lineage4.2.1 None
ERR3283034 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR10869015 Sensitive lineage4.8 None
SRR13861474 Sensitive lineage4.9 None
ERR405217 Sensitive lineage2.2.1 None
SRR10869138 Sensitive lineage2.2.1 None
SRR19303931 Other lineage2.2.1 None
SRR13861262 Other lineage4.9 None
ERR2747615 Sensitive lineage4.9 None
SRR13861346 Sensitive lineage4.9 None
SRR13861561 Sensitive lineage4.9 None
ERR4799636 Pre-XDR-TB lineage2.2.1 None
SRR13861169 Sensitive lineage4.9 None
ERR3283035 Sensitive lineage4.9 None
SRR11972450 MDR-TB lineage2.2.1 None
SRR1173621 MDR-TB lineage3 None
SRR11349135 XDR-TB lineage4.3.3 None
ERR405222 Sensitive lineage3.1;lineage4 None
SAMN02598978 Other lineage1.1.2 None
SRR13861140 HR-TB lineage4.9 None
SRR13861234 HR-TB lineage4.9 None
ERR405216 Sensitive lineage3.1.1 None
SRR13861170 Other lineage4.9 None
SRR13861580 Other lineage4.9 None
SRR13861276 Sensitive lineage4.9 None
SRR13861601 Sensitive lineage4.9 None
ERR867519 Other lineage4.3.3 None
SRR13861506 RR-TB lineage4.9 None
ERR3283053 Sensitive lineage4.9 None
SRR13861138 Sensitive lineage4.9 None
SRR13861178 Sensitive lineage4.9 None
SRR13861165 HR-TB lineage4.9 None
ERR1140771 Sensitive lineage2.2.1 None
ERR3439235 Sensitive lineage4.9 None
ERR4828749 Sensitive lineage2.2.1 None
SRR13861446 Other lineage4.9 None
SRR13861203 Sensitive lineage4.9 None
SRR13861443 Other lineage4.9 None
ERR5311095 Other La1.8.1 None
ERR4815985 Other lineage5.1.2 None
SRR7444074 Sensitive lineage4.9 None
SRR14781861 MDR-TB lineage4.2.1 None
SRR13861460 Sensitive lineage4.9 None
ERR6149870 Other La1.8.2 None
ERR502942 Sensitive lineage4.9 None
SRR13861722 Sensitive lineage4.9 None
ERR323057 Sensitive lineage4.9 None
SRR13861543 Sensitive lineage4.9 None
SRR13861501 Sensitive lineage4.9 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
ERR3797060 Other La1.8.1 None
ERR4828764 Sensitive lineage2.2.1 None
SRR7069638 Pre-XDR-TB lineage2.2.1 None
SRR13861365 Sensitive lineage4.9 None
SRR13861152 Sensitive lineage4.9 None
SRR19303791 Sensitive lineage5.1.3 None
ERR5979817 Sensitive lineage4.9 None
SRR11348198 Sensitive lineage1.1.2 None
SRR13861729 Sensitive lineage4.9 None
SRR5341346 Sensitive lineage3 None
SRR13861151 Sensitive lineage4.9 None
SRR13861338 Sensitive lineage4.9 None
SRR10305656 Other lineage2.2.1 None
DRR213597 MDR-TB lineage2.2.2 None
SRR13861488 Sensitive lineage4.9 None
SRR13861549 Other lineage4.9 None
ERR126611 Sensitive lineage4.9.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR4188072 Sensitive lineage4.9 None
SRR13861292 Sensitive lineage4.9 None
ERR1140795 Sensitive lineage6.2.1 None
ERR2446413 Sensitive lineage4.6.3 None
ERR6866046 Sensitive lineage4.1.1.3 None
SRR7131121 Other lineage4.3.3 None
SRR13861520 Other lineage4.9 None
SRR13861563 Sensitive lineage4.9 None
SRR13861148 Other lineage4.9 None
ERR1873445 MDR-TB lineage2.2.1 None
SRR7131053 Other lineage2.2.1 None
SRR10869085 Sensitive lineage2.2.1 None
ERR2510807 Sensitive lineage4.6 None
SRR13861408 Sensitive lineage4.9 None
ERR9786392 Sensitive lineage4.3.4.1 None
ERR473340 Sensitive lineage1.1.2 None
SRR13861547 Sensitive lineage4.9 None
SRR1173566 Other lineage1.1.2 None
ERR5162127 Sensitive lineage4.9 None
SRR13861275 Other lineage4.9 None
SRR13861163 Sensitive lineage4.9 None
SRR16295765 Other lineage2.2.1 None
SRR7131134 Sensitive lineage4.1.2.1 None
SRR13861320 Sensitive lineage4.9 None
SRR1172267 Sensitive lineage1.1.2 None
SRR13861571 Sensitive lineage4.9 None
ERR9891984 Other lineage6.3.1 None
ERR5979791 Sensitive lineage4.9 None
SRR11348155 Sensitive lineage1.1.2 None
ERR2027233 Sensitive lineage4.1.2.1 None
SRR16156814 Sensitive lineage4.9 None
SRR13861475 Sensitive lineage4.9 None
SRR13861524 Sensitive lineage4.9 None
ERR4828772 HR-TB lineage2.2.1 None
SRR13861599 Other lineage4.9 None
ERR4828810 Pre-XDR-TB lineage2.2.1 None
SRR13861456 Sensitive lineage4.9 None
ERR4829202 Sensitive lineage3 None
SRR13861629 Sensitive lineage4.9 None
SRR12420692 MDR-TB lineage2.2.1 None
ERR4829196 Other lineage4.1.2 None
ERR6149874 Other La1.8.2 None
SRR13861233 Sensitive lineage4.9 None
SRR13861368 Sensitive lineage4.9 None
SRR13861585 Other lineage4.9 None
SRR13861472 Other lineage4.9 None
ERR6359073 Sensitive lineage4.9 None
ERR3283043 Other lineage4.9 None
SRR13861199 Sensitive lineage4.9 None
SRR638895 Sensitive lineage4.9 None
ERR1140774 Sensitive lineage5.1.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR11342682 Other lineage4.1.2 None
SRR13861498 Other lineage4.9 None
SRR7131160 Sensitive lineage3 None
ERR1034791 MDR-TB lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861437 Sensitive lineage4.9 None
ERR405201 Sensitive lineage4.3.4.2.1 None
SRR13861287 Sensitive lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR560439 Other lineage4.9 None
ERR4024562 Sensitive lineage4.1.1.3 None
SRR13861425 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR13861216 Sensitive lineage4.9 None
SRR13861590 Sensitive lineage4.9 None
SRR7898217 MDR-TB lineage1.1.2 None
ERR4188218 Sensitive lineage4.9 None
SRR1168955 Sensitive lineage4.2;lineage4.9 None
ERR4830495 MDR-TB lineage4.4.1.1.1 None
ERR5162126 Sensitive lineage4.9 None
ERR4815898 Other lineage3 None