TB-Profiler result

Run: 327ca635-38a4-440e-9cb4-9aed06fe4a9b

Summary

Run ID: 327ca635-38a4-440e-9cb4-9aed06fe4a9b

Sample name:

Date: 10-04-2023 14:15:29

Number of reads: 12557

Percentage reads mapped: 54.16

Median coverage: 0

Strain:

Spoligotype:

Drug-resistance: Sensitive


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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
moxifloxacin
levofloxacin
bedaquiline
delamanid
pretomanid
linezolid
streptomycin
amikacin
kanamycin
capreomycin
clofazimine
ethionamide
para-aminosalicylic_acid
cycloserine
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrA 8642 c.1341A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8672 c.1371A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8693 c.1392T>C synonymous_variant 0.98 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8696 c.1395G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8699 c.1398A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8711 c.1410A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8714 c.1413A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8729 c.1428T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8730 p.Gly477Arg missense_variant 0.98 fluoroquinolones
moxifloxacin
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 8740 p.Arg480His missense_variant 0.98 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8747 c.1446A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8750 c.1449C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8751 p.Ala484Ser missense_variant 0.97 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8756 c.1455A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8762 c.1461G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8767 p.Arg489Lys missense_variant 1.0 fluoroquinolones
moxifloxacin Uncertain significance
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 8780 p.Asp493Glu missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8786 c.1485T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8801 c.1500G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8807 c.1506C>T synonymous_variant 0.97 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8810 c.1509A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8816 c.1515C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8818 p.Ser506Asn missense_variant 1.0 fluoroquinolones
moxifloxacin Uncertain significance
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 8828 c.1527T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8837 c.1536C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8852 c.1551T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8858 c.1557T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8867 c.1566A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8870 c.1569G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8873 c.1572A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8891 c.1590G>A synonymous_variant 0.98 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8897 c.1596T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8903 c.1602T>C synonymous_variant 0.97 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
fgd1 491077 p.Asn99Glu missense_variant 1.0 delamanid
fgd1 491082 c.300T>C synonymous_variant 1.0 delamanid
fgd1 491083 p.Val101Ile missense_variant 1.0 delamanid
fgd1 491091 c.309T>C synonymous_variant 0.98 delamanid
fgd1 491094 c.312C>G synonymous_variant 1.0 delamanid
fgd1 491097 c.315G>C synonymous_variant 1.0 delamanid
fgd1 491106 c.324T>C synonymous_variant 1.0 delamanid
fgd1 491121 c.339A>G synonymous_variant 1.0 delamanid
fgd1 491130 c.348C>G synonymous_variant 0.92 delamanid
fgd1 491144 p.Ala121Asp missense_variant 0.98 delamanid
fgd1 491151 c.369G>A synonymous_variant 0.96 delamanid
fgd1 491173 c.391C>A synonymous_variant 1.0 delamanid
fgd1 491181 c.399T>C synonymous_variant 1.0 delamanid
fgd1 491184 c.402A>G synonymous_variant 1.0 delamanid
fgd1 491191 p.Gly137Arg missense_variant 0.96 delamanid
fgd1 491194 c.412_414delCTAinsTTG synonymous_variant 0.98 delamanid
fgd1 491202 c.420G>C synonymous_variant 0.92 delamanid
fgd1 491203 p.Gln141Glu missense_variant 1.0 delamanid
fgd1 491212 p.Ser144Arg missense_variant 1.0 delamanid
fgd1 491217 c.435T>C synonymous_variant 1.0 delamanid
fgd1 491232 c.450T>C synonymous_variant 1.0 delamanid
fgd1 491241 p.Asp153Glu missense_variant 1.0 delamanid
fgd1 491244 c.462T>C synonymous_variant 1.0 delamanid
fgd1 491259 c.477T>C synonymous_variant 1.0 delamanid
fgd1 491283 p.Asp167Glu missense_variant 1.0 delamanid
fgd1 491286 c.504G>C synonymous_variant 0.94 delamanid
fgd1 491289 c.507C>G synonymous_variant 0.94 delamanid
fgd1 491291 c.510delG frameshift_variant 0.96 delamanid
fgd1 491296 c.514_515insA frameshift_variant 1.0 delamanid
fgd1 491302 p.Ile174Val missense_variant 1.0 delamanid
fgd1 491307 c.525C>G synonymous_variant 0.98 delamanid
fgd1 491313 c.531C>G synonymous_variant 0.98 delamanid
fgd1 491319 c.537G>C synonymous_variant 0.96 delamanid
fgd1 491325 c.543G>C synonymous_variant 0.98 delamanid
fgd1 491337 c.555C>G synonymous_variant 1.0 delamanid
fgd1 491340 c.558C>G synonymous_variant 1.0 delamanid
fgd1 491349 c.567T>C synonymous_variant 1.0 delamanid
fgd1 491364 c.582T>C synonymous_variant 0.98 delamanid
fgd1 491367 c.585G>C synonymous_variant 1.0 delamanid
fgd1 491393 p.Thr204Lys missense_variant 1.0 delamanid
fgd1 491397 p.Glu205Asp missense_variant 0.94 delamanid
fgd1 491406 p.Met208Ile missense_variant 1.0 delamanid
fgd1 491409 c.627G>C synonymous_variant 0.96 delamanid
fgd1 491412 c.630G>C synonymous_variant 0.96 delamanid
fgd1 491417 c.636delA frameshift_variant 0.94 delamanid
fgd1 491421 c.639A>G synonymous_variant 0.92 delamanid
fgd1 491430 c.648T>G synonymous_variant 0.96 delamanid
fgd1 491431 p.Ala217Ile missense_variant 0.98 delamanid
fgd1 491434 p.Ala218Asn missense_variant 0.98 delamanid
fgd1 491442 c.660A>C synonymous_variant 1.0 delamanid
fgd1 491443 p.Ser221Asn missense_variant 1.0 delamanid
fgd1 491453 p.Gly224Asp missense_variant 1.0 delamanid
fgd1 491472 c.690A>G synonymous_variant 1.0 delamanid
rpoB 759896 c.90A>C synonymous_variant 0.94 rifampicin
rpoB 759902 c.96G>A synonymous_variant 0.97 rifampicin
rpoB 759905 c.99C>T synonymous_variant 0.98 rifampicin
rpoB 759914 c.108T>C synonymous_variant 1.0 rifampicin
rpoB 759920 c.114G>C synonymous_variant 0.99 rifampicin
rpoB 759926 c.120A>G synonymous_variant 0.98 rifampicin
rpoB 759929 c.123A>C synonymous_variant 1.0 rifampicin
rpoB 759932 c.126T>C synonymous_variant 0.97 rifampicin
rpoB 759944 c.138A>C synonymous_variant 1.0 rifampicin
rpoB 759947 c.141C>G synonymous_variant 0.98 rifampicin
rpoB 759956 c.150C>G synonymous_variant 0.98 rifampicin
rpoB 759961 p.Thr52Ile missense_variant 0.98 rifampicin
rpoB 759965 c.159T>C synonymous_variant 0.98 rifampicin
rpoB 759968 c.162G>C synonymous_variant 1.0 rifampicin
rpoB 759978 c.172C>T synonymous_variant 0.98 rifampicin
rpoB 759986 c.180T>C synonymous_variant 0.99 rifampicin
rpoB 759987 p.Ser61Ala missense_variant 1.0 rifampicin
rpoB 759995 c.189C>G synonymous_variant 0.98 rifampicin
rpoB 760004 c.198A>G synonymous_variant 0.99 rifampicin
rpoB 760005 p.Ser67Ala missense_variant 0.99 rifampicin
rpoB 760015 p.Glu70Ala missense_variant 0.97 rifampicin
rpoB 760019 c.213G>C synonymous_variant 0.95 rifampicin
rpoB 760022 c.216T>C synonymous_variant 0.99 rifampicin
rpoB 760030 p.Asn75Thr missense_variant 0.93 rifampicin Uncertain significance
rpoB 760034 c.228A>G synonymous_variant 0.98 rifampicin
rpoB 760040 c.234T>C synonymous_variant 0.98 rifampicin
rpoB 760046 c.240G>C synonymous_variant 0.97 rifampicin
rpoB 760060 p.Tyr85Leu missense_variant 0.99 rifampicin
rpoB 760067 c.261G>C synonymous_variant 0.98 rifampicin
rpoB 760070 c.264T>G synonymous_variant 0.97 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.99 rifampicin
rpoB 760101 c.295T>C synonymous_variant 0.99 rifampicin
rpoB 760112 c.306T>C synonymous_variant 0.97 rifampicin
rpoB 760118 c.312T>G synonymous_variant 1.0 rifampicin
rpoB 760121 c.315T>C synonymous_variant 0.99 rifampicin
rpoB 760130 p.Asp108Glu missense_variant 1.0 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 1.0 rifampicin
rpoB 760142 c.336C>G synonymous_variant 0.98 rifampicin
rpoB 760181 c.375T>C synonymous_variant 1.0 rifampicin
rpoB 760184 c.378A>G synonymous_variant 1.0 rifampicin
rpoB 760196 c.390C>G synonymous_variant 0.99 rifampicin
rpoB 760223 c.417T>C synonymous_variant 0.99 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.99 rifampicin
rpoB 760283 c.477G>C synonymous_variant 1.0 rifampicin
rpoB 760298 c.492G>C synonymous_variant 0.99 rifampicin
rpoB 760307 c.501T>C synonymous_variant 0.99 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.99 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.98 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.99 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.97 rifampicin
rpoB 760361 c.555T>C synonymous_variant 0.99 rifampicin
rpoB 760370 c.564C>G synonymous_variant 0.96 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.99 rifampicin
rpoB 760380 p.Thr192Leu missense_variant 0.98 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.98 rifampicin
rpoB 760412 c.606C>G synonymous_variant 0.98 rifampicin
rpoB 760424 c.618C>G synonymous_variant 0.98 rifampicin
rpoB 760430 c.624T>C synonymous_variant 0.98 rifampicin
rpoB 760475 c.669A>G synonymous_variant 0.98 rifampicin
rpoB 760481 c.675G>T synonymous_variant 0.98 rifampicin
rpoB 760484 c.678A>G synonymous_variant 0.99 rifampicin
rpoB 760522 p.Ser239Asn missense_variant 0.99 rifampicin
rpoB 760532 c.726T>C synonymous_variant 0.99 rifampicin
rpoB 760533 p.Val243Thr missense_variant 0.98 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.99 rifampicin
rpoB 760547 c.741G>C synonymous_variant 0.99 rifampicin
rpoB 760563 p.Arg253Met missense_variant 0.95 rifampicin
rpoB 760591 p.Val262Ala missense_variant 1.0 rifampicin Uncertain significance
rpoB 760611 c.805T>C synonymous_variant 0.99 rifampicin
rpoB 760646 c.840C>G synonymous_variant 0.98 rifampicin
rpoB 760655 c.849A>G synonymous_variant 0.98 rifampicin
rpoB 760661 c.855A>C synonymous_variant 1.0 rifampicin
rpoB 760670 c.864G>C synonymous_variant 1.0 rifampicin
rpoB 760674 c.868T>C synonymous_variant 0.99 rifampicin
rpoB 760679 c.873A>G synonymous_variant 0.99 rifampicin
rpoB 760683 c.877T>C synonymous_variant 0.99 rifampicin
rpoB 760715 c.909C>G synonymous_variant 0.98 rifampicin
rpoB 760718 c.912C>T synonymous_variant 0.98 rifampicin
rpoB 760724 c.918T>C synonymous_variant 0.99 rifampicin
rpoB 760730 c.924T>C synonymous_variant 0.99 rifampicin
rpoB 760751 c.945G>C synonymous_variant 0.99 rifampicin
rpoB 760757 c.951T>C synonymous_variant 0.99 rifampicin
rpoB 760759 p.Val318Ala missense_variant 0.99 rifampicin
rpoB 760769 c.963C>G synonymous_variant 0.98 rifampicin
rpoB 760775 c.969G>C synonymous_variant 0.96 rifampicin
rpoB 760776 c.970_972delTCGinsAGC synonymous_variant 0.99 rifampicin
rpoB 760793 c.987A>G synonymous_variant 0.98 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.99 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 0.99 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 1.0 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 0.99 rifampicin
rpoB 760830 c.1024T>C synonymous_variant 1.0 rifampicin
rpoB 760841 c.1035T>C synonymous_variant 1.0 rifampicin
rpoB 760845 p.Thr347Pro missense_variant 0.99 rifampicin
rpoB 760859 c.1053T>C synonymous_variant 0.95 rifampicin
rpoB 760862 c.1056G>C synonymous_variant 0.98 rifampicin
rpoB 760869 p.Val355Ile missense_variant 0.99 rifampicin Uncertain significance
rpoB 760886 c.1080A>G synonymous_variant 0.96 rifampicin
rpoB 760925 c.1119T>C synonymous_variant 1.0 rifampicin
rpoB 760928 c.1122G>C synonymous_variant 0.98 rifampicin
rpoB 760931 c.1125C>G synonymous_variant 0.99 rifampicin
rpoB 760934 c.1128C>T synonymous_variant 0.97 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.98 rifampicin
rpoB 760982 c.1176G>C synonymous_variant 0.98 rifampicin
rpoB 760985 c.1179G>C synonymous_variant 0.97 rifampicin
rpoB 760991 c.1185G>C synonymous_variant 0.99 rifampicin
rpoB 761006 c.1200C>G synonymous_variant 0.98 rifampicin
rpoB 761015 c.1209G>C synonymous_variant 0.99 rifampicin
rpoB 761021 c.1215G>C synonymous_variant 0.99 rifampicin
rpoB 761027 c.1221A>G synonymous_variant 1.0 rifampicin
rpoB 761036 c.1230G>C synonymous_variant 0.99 rifampicin
rpoB 761037 c.1231T>C synonymous_variant 0.99 rifampicin
rpoB 761057 c.1251G>C synonymous_variant 0.98 rifampicin
rpoB 761102 c.1296A>G synonymous_variant 0.99 rifampicin
rpoB 761129 c.1323G>C synonymous_variant 0.98 rifampicin
rpoB 761132 c.1326G>T synonymous_variant 0.94 rifampicin
rpoB 761133 c.1327T>C synonymous_variant 0.95 rifampicin
rpoB 761150 c.1344A>C synonymous_variant 1.0 rifampicin
rpoB 761153 c.1347G>C synonymous_variant 1.0 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.92 rifampicin
rpoB 761180 c.1374A>C synonymous_variant 0.99 rifampicin
rpoB 761189 c.1383T>C synonymous_variant 0.99 rifampicin
rpoB 761195 c.1389G>C synonymous_variant 0.98 rifampicin
rpoB 761207 c.1401C>T synonymous_variant 0.96 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 0.99 rifampicin
rpoB 761219 c.1413G>C synonymous_variant 1.0 rifampicin
rpoB 761249 c.1443A>G synonymous_variant 0.96 rifampicin
rpoB 761255 c.1449T>G synonymous_variant 0.99 rifampicin
rpoB 761261 c.1455G>T synonymous_variant 0.95 rifampicin
rpoB 761306 c.1500C>G synonymous_variant 0.96 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.97 rifampicin
rpoB 761330 c.1524G>C synonymous_variant 0.99 rifampicin
rpoB 761354 c.1548C>T synonymous_variant 0.98 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.99 rifampicin
rpoB 761362 p.Ser519Thr missense_variant 1.0 rifampicin
rpoB 761373 p.Val523His missense_variant 0.98 rifampicin
rpoB 761408 c.1602G>C synonymous_variant 0.98 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 1.0 rifampicin
rpoB 761423 c.1617T>C synonymous_variant 0.99 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.99 rifampicin
rpoB 761438 c.1632G>C synonymous_variant 0.96 rifampicin
rpoB 761439 p.Asp545Lys missense_variant 0.94 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 0.99 rifampicin
rpoB 761447 c.1641C>G synonymous_variant 0.99 rifampicin
rpoB 761452 p.Val549Glu missense_variant 0.99 rifampicin
rpoB 761457 p.Pro551Ser missense_variant 0.98 rifampicin
rpoB 761477 c.1671C>G synonymous_variant 0.98 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.96 rifampicin
rpoB 761510 c.1704T>C synonymous_variant 0.99 rifampicin
rpoB 761531 c.1725C>G synonymous_variant 0.98 rifampicin
rpoB 761534 c.1728G>A synonymous_variant 0.96 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.98 rifampicin
rpoB 761570 c.1764T>C synonymous_variant 0.94 rifampicin
rpoB 761573 c.1767C>G synonymous_variant 0.97 rifampicin
rpoB 761579 c.1773G>C synonymous_variant 0.98 rifampicin
rpoB 761588 c.1782C>T synonymous_variant 0.96 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.98 rifampicin
rpoB 761612 c.1806G>C synonymous_variant 0.97 rifampicin
rpoB 761615 c.1809A>C synonymous_variant 0.99 rifampicin
rpoB 761636 c.1830G>T synonymous_variant 0.99 rifampicin
rpoB 761645 c.1839C>G synonymous_variant 0.98 rifampicin
rpoB 761648 c.1842T>C synonymous_variant 1.0 rifampicin
rpoB 761657 c.1851C>G synonymous_variant 0.99 rifampicin
rpoB 761675 c.1869G>C synonymous_variant 0.99 rifampicin
rpoB 761724 p.Glu640Gln missense_variant 0.97 rifampicin
rpoB 761727 p.Ser641Gly missense_variant 0.98 rifampicin
rpoB 761728 c.1923dupC frameshift_variant 0.99 rifampicin
rpoB 761732 c.1926C>G synonymous_variant 0.98 rifampicin
rpoB 761735 c.1929C>G synonymous_variant 0.99 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.96 rifampicin
rpoB 761750 c.1944G>C synonymous_variant 0.99 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.99 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.98 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.98 rifampicin
rpoB 761791 p.Arg662His missense_variant 0.99 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.98 rifampicin
rpoB 761815 p.Ala670Glu missense_variant 0.98 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.99 rifampicin
rpoB 761848 p.Cys681Ser missense_variant 0.97 rifampicin
rpoB 761852 c.2046C>G synonymous_variant 0.93 rifampicin
rpoB 761858 c.2052G>C synonymous_variant 0.99 rifampicin
rpoB 761873 c.2067A>C synonymous_variant 1.0 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 1.0 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.98 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.99 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 1.0 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.99 rifampicin Uncertain significance
rpoB 761916 p.Asp704Asn missense_variant 0.98 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.98 rifampicin
rpoB 761954 c.2148C>G synonymous_variant 0.99 rifampicin
rpoB 762008 c.2202C>T synonymous_variant 0.98 rifampicin
rpoB 762014 c.2208C>T synonymous_variant 0.93 rifampicin
rpoB 762017 c.2211A>G synonymous_variant 0.99 rifampicin
rpoB 762053 c.2247T>C synonymous_variant 0.99 rifampicin
rpoB 762062 c.2256T>C synonymous_variant 0.99 rifampicin
rpoB 762065 c.2259T>C synonymous_variant 1.0 rifampicin
rpoB 762083 c.2277T>C synonymous_variant 0.99 rifampicin
rpoB 762086 c.2280G>C synonymous_variant 0.98 rifampicin
rpoB 762101 c.2295C>G synonymous_variant 1.0 rifampicin
rpoB 762114 p.Ile770Val missense_variant 0.99 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.98 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.99 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.99 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.99 rifampicin
rpoB 762167 c.2361T>C synonymous_variant 0.99 rifampicin
rpoB 762176 c.2370T>C synonymous_variant 0.99 rifampicin
rpoB 762185 c.2379G>C synonymous_variant 0.99 rifampicin
rpoB 762206 c.2400C>G synonymous_variant 0.98 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.99 rifampicin
rpoB 762246 c.2440C>T synonymous_variant 0.97 rifampicin
rpoB 762254 c.2448T>G synonymous_variant 0.98 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.99 rifampicin
rpoB 762266 c.2460T>C synonymous_variant 0.99 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.99 rifampicin
rpoB 762293 c.2487T>C synonymous_variant 0.99 rifampicin
rpoB 762314 c.2508C>T synonymous_variant 0.84 rifampicin
rpoB 762317 c.2511A>G synonymous_variant 0.99 rifampicin
rpoB 762329 c.2523G>C synonymous_variant 0.99 rifampicin
rpoB 762338 c.2532T>C synonymous_variant 0.95 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.97 rifampicin
rpoB 762359 c.2553C>T synonymous_variant 0.97 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.99 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.99 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.98 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.98 rifampicin
rpoC 762404 c.-966T>C upstream_gene_variant 0.99 rifampicin
rpoC 762410 c.-960T>C upstream_gene_variant 1.0 rifampicin
rrs 1471948 n.103A>G non_coding_transcript_exon_variant 0.75 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471985 n.140T>G non_coding_transcript_exon_variant 0.91 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1471986 n.141C>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471994 n.149G>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471995 n.150C>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471998 n.153G>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472019 n.174G>C non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472023 n.178G>A non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472083 n.238G>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472086 n.241T>G non_coding_transcript_exon_variant 0.88 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472089 n.244C>T non_coding_transcript_exon_variant 0.89 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.78 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472127 n.282C>T non_coding_transcript_exon_variant 0.86 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472128 n.283G>C non_coding_transcript_exon_variant 0.79 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.88 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.71 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472223 n.378C>G non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472228 n.383G>C non_coding_transcript_exon_variant 0.75 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472259 n.414C>A non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.94 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472405 n.560C>T non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472412 n.567A>G non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472415 n.570T>G non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472431 n.586G>A non_coding_transcript_exon_variant 0.71 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472432 n.587C>A non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472477 n.632T>A non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472507 n.662C>G non_coding_transcript_exon_variant 0.79 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472557 n.712G>A non_coding_transcript_exon_variant 0.79 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472599 n.754G>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472616 n.771G>A non_coding_transcript_exon_variant 0.87 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472655 n.810G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472658 n.813G>A non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472719 n.874G>A non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472781 n.936C>T non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.91 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472870 n.1025T>G non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472959 n.1114T>A non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472982 n.1137G>C non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473004 n.1159T>A non_coding_transcript_exon_variant 0.83 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.92 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473062 n.1217T>A non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473068 n.1223A>G non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473093 n.1248C>A non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473094 n.1249T>A non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.74 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473115 n.1270G>A non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.85 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473148 n.1303G>A non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1473163 n.1318C>T non_coding_transcript_exon_variant 0.88 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473177 n.1332G>A non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473192 n.1347A>G non_coding_transcript_exon_variant 0.72 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473202 n.1357C>T non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473248 n.1403G>A non_coding_transcript_exon_variant 0.75 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473249 n.1404T>C non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473255 n.1410A>G non_coding_transcript_exon_variant 0.89 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473274 n.1429C>T non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473303 n.1458T>C non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473319 n.1474C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473327 n.1482A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473328 n.1483C>T non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin