lineage | Count |
---|---|
La1.8.1 | 41 |
lineage4.9;La1.8.1 | 1 |
lineage4.4.1.1 | 17 |
lineage4.3.2.1 | 16 |
lineage4.3.3 | 28 |
lineage4;lineage2 | 1 |
lineage2.2.1 | 91 |
lineage4.3.4.2 | 6 |
lineage4.1.2.1 | 17 |
lineage4.4.1.1.1 | 9 |
lineage6.3.1 | 2 |
lineage2.2.2 | 13 |
lineage4.9 | 249 |
lineage1.1.1.1 | 1 |
lineage3.1.1 | 12 |
lineage4.3.4.2.1 | 18 |
lineage4.8 | 22 |
lineage5.1.1 | 1 |
16 | |
lineage4.6.2.2 | 3 |
lineage4.1.1.3 | 8 |
lineage4.3.4.1 | 8 |
lineage4.1 | 1 |
lineage4.1.4 | 1 |
lineage1.1.3.2 | 5 |
lineage4.1.1 | 16 |
lineage6.2.2 | 2 |
lineage4 | 8 |
lineage4;lineage3.1 | 1 |
lineage4;La1 | 1 |
La1.8 | 1 |
La1 | 1 |
lineage1.1.2 | 8 |
La1.3 | 6 |
La1.2 | 7 |
lineage3 | 13 |
lineage2.2.1.1 | 8 |
lineage4.7 | 4 |
lineage1.2.1.2.1 | 4 |
lineage4.2.2.2 | 3 |
lineage4.1.2.1.1 | 1 |
lineage4.4.1.2 | 2 |
lineage1.1.1 | 2 |
lineage5.1.3 | 1 |
lineage4.2.2.1 | 1 |
lineage4.8.1 | 3 |
lineage6.1.3 | 1 |
lineage6 | 2 |
lineage4.9;lineage2.2.1 | 1 |
lineage4.3.2 | 1 |
La1.6 | 4 |
lineage1.2.2.2 | 3 |
lineage4.6.1.2 | 2 |
lineage4.9;lineage4.4.2 | 1 |
lineage1.2.2 | 1 |
lineage1.1.3.1 | 2 |
La1.7.1 | 5 |
La1.4 | 1 |
lineage3.1.2 | 1 |
lineage4.4.2 | 3 |
lineage4.1.2 | 5 |
lineage4.5 | 3 |
lineage4.3.4 | 1 |
lineage4.6.4 | 1 |
lineage4.6.1.1 | 1 |
lineage4.2 | 1 |
lineage4.1.1.2 | 1 |
lineage4.3.2.1;lineage2.2.1 | 1 |
lineage1.1.3.3 | 1 |
lineage1.2.2.1 | 2 |
lineage4.2.1 | 1 |
lineage4.6.1 | 1 |
lineage2.2 | 2 |
lineage4;lineage2.2.1 | 1 |
lineage4.4 | 1 |
lineage4.4.1 | 1 |
lineage4.5;lineage4.4.2 | 1 |
lineage4.9;lineage4.3.4.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 735 |
ID | Drug resistance | Lineage | Country iso2 | ERR5087568 | Other | La1.8.1 | None | ERR5162108 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5087675 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5087719 | Other | La1.8.1 | None | SRR6982516 | Sensitive | lineage4.4.1.1 | None | ERR5311085 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR8217878 | Other | lineage2.2.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7131168 | Other | lineage4.1.2.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971090 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR3283028 | Other | None | ERR3273119 | MDR-TB | lineage2.2.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3445503 | HR-TB | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3439443 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3797043 | HR-TB | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405194 | Sensitive | lineage4.1.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR4178241 | Sensitive | lineage4.3.3 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187720 | Other | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187666 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4187819 | Other | La1.8 | None | ERR4188014 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4188273 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188369 | Other | La1.8.1 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188396 | Sensitive | La1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4769404 | Other | La1.3 | None | ERR4627392 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769462 | Other | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769561 | Other | La1.3 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4772230 | Other | La1.2 | None | ERR4772210 | Other | La1.2 | None | ERR4772219 | Other | La1.2 | None | ERR4772207 | Other | La1.3 | None | ERR4772218 | Other | La1.2 | None | ERR4799636 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4800483 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810941 | MDR-TB | lineage2.2.1 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR5979802 | Sensitive | lineage4.9 | None | ERR5979789 | Other | lineage4.9 | None | ERR5979787 | Other | lineage4.9 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR5979808 | Sensitive | lineage4.9 | None | ERR5979799 | Sensitive | lineage4.9 | None | ERR5979801 | Sensitive | lineage4.9 | None | ERR5979805 | Sensitive | lineage4.9 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR5979815 | Sensitive | lineage4.9 | None | ERR5979819 | Sensitive | lineage4.9 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR5979825 | Sensitive | lineage4.9 | None | ERR5979828 | Sensitive | lineage4.9 | None | ERR5979809 | Sensitive | lineage4.9 | None | ERR5979810 | Sensitive | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197025 | Other | lineage4.7 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | ERR6362473 | MDR-TB | lineage2.2.2 | None | ERR6326065 | MDR-TB | lineage4.3.4.2 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR6865390 | Sensitive | lineage4.3.3 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR751729 | Other | lineage1.1.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR8975455 | Sensitive | lineage4.8 | None | ERR8774091 | Sensitive | lineage4.1.1.3 | None | ERR7821222 | Sensitive | lineage4.8.1 | None | ERR9117799 | Sensitive | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR987719 | HR-TB | lineage3 | None | ERR9891984 | Sensitive | lineage6.3.1 | None | ERR9992612 | Pre-XDR-TB | lineage4.3.3 | None | ERR9787364 | Sensitive | lineage6 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9992790 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992817 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993028 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992810 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR9993167 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10315475 | MDR-TB | lineage4.8 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR10482948 | Other | La1.8.1 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR10869015 | Sensitive | lineage4.8 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869138 | Sensitive | lineage2.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR10808722 | Sensitive | lineage4.8 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR10993956 | Other | La1.6 | None | SRR10993936 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349176 | RR-TB | lineage3 | None | SRR11349141 | MDR-TB | lineage4.1.1.3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1180297 | Sensitive | lineage1.2.2.2 | None | SRR1140583 | RR-TB | lineage4.6.1.2 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR11871413 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199478 | Other | None | SRR1180451 | Sensitive | lineage1.2.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972311 | Pre-XDR-TB | None | SRR11972434 | Sensitive | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR13423553 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR12882709 | Sensitive | lineage3.1.1 | None | SRR13199734 | Other | La1.2 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861145 | Sensitive | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861148 | Sensitive | lineage4.9 | None | SRR13861155 | Sensitive | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861177 | Sensitive | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861171 | Sensitive | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861234 | HR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861278 | Other | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861309 | HR-TB | lineage4.9 | None | SRR13861311 | Other | lineage4.9 | None | SRR13861315 | Sensitive | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861360 | HR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861359 | Sensitive | lineage4.9 | None | SRR13861364 | Other | lineage4.9 | None | SRR13861365 | Other | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861409 | HR-TB | lineage4.9 | None | SRR13861425 | Sensitive | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861442 | Other | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861441 | Sensitive | lineage4.9 | None | SRR13861444 | Sensitive | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861469 | Sensitive | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861472 | Other | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861492 | Sensitive | lineage4.9 | None | SRR13861496 | Other | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861523 | Other | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861517 | RR-TB | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861576 | Other | lineage4.9 | None | SRR13861564 | Sensitive | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861615 | Sensitive | lineage4.9 | None | SRR13861605 | Sensitive | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861620 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861676 | Sensitive | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861719 | Sensitive | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR14802194 | Sensitive | lineage4.3.3 | None | SRR14179701 | Sensitive | lineage4.1.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR14801688 | Sensitive | lineage4.3.3 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR1791910 | Other | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18391683 | Other | La1.7.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR19576436 | Sensitive | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101436 | Sensitive | lineage4.1.1 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101662 | Sensitive | lineage4.3.3 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR3675463 | Sensitive | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21764250 | Other | lineage4.9 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR3148213 | Pre-XDR-TB | lineage4.3.4.1 | mx | ERR4814524 | Other | lineage4.1.1 | gb | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | SRR3675273 | Sensitive | lineage3 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4815830 | Sensitive | lineage6 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR4816561 | Sensitive | lineage3 | gb | ERR2027277 | Other | lineage4.8 | None | ERR216949 | Sensitive | lineage4 | None | ERR1034791 | RR-TB | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR4816303 | Other | lineage4.1.1.3 | gb | ERR2179850 | Sensitive | lineage4 | None | ERR4817248 | Other | lineage4.6.2.2 | gb | SRR4033203 | Sensitive | lineage4.9 | None | SRR5065556 | Sensitive | lineage2.2.1 | vn | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR2179737 | HR-TB | lineage4.2 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | ERR4818797 | Other | lineage4.5 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR4818288 | HR-TB | lineage3 | None | ERR4818270 | Sensitive | lineage3 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5073729 | Sensitive | lineage4.8 | vn | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR2512848 | Sensitive | lineage1.2.1.2.1 | gb | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2515484 | Other | lineage4.8 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | ERR4819125 | Other | lineage2.2.1 | gb | ERR2515364 | Sensitive | lineage4.1.2 | za | ERR2515460 | Sensitive | lineage4.8 | za | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR2514756 | Other | lineage3 | gb | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4820858 | Sensitive | lineage4.2.2.2 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR4821122 | Sensitive | lineage4.8 | gb | ERR2693240 | Other | La1.8.1 | None | ERR2652991 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR6045124 | Other | lineage4.9 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2747601 | Sensitive | lineage4.9 | None | ERR4821211 | Sensitive | lineage4.3.3 | gb | SRR6045920 | Other | lineage4.1.1 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | ERR4830493 | MDR-TB | lineage2.2.1 | None | SRR6046189 | Other | lineage4.8 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2843536 | Other | lineage2.2.1 | None | ERR4830501 | Sensitive | lineage2.2.1 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | ERR4830525 | MDR-TB | lineage4.4.1.1.1 | za | ERR4828747 | Sensitive | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6982078 | Sensitive | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | SRR6982410 | Other | lineage4.8.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR4831711 | HR-TB | lineage2.2.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982174 | Sensitive | lineage4.3.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6896448 | Sensitive | lineage4.1.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6824440 | Sensitive | lineage4.5;lineage4.4.2 | None | SRR6824398 | Sensitive | lineage2.2.1 | cn | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6824423 | Sensitive | lineage4.4.2 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981962 | Sensitive | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855917 | Other | lineage4.8 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982070 | RR-TB | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982405 | Sensitive | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR5311093 | Other | La1.8.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None |
---|