EBG00000313339 - n.2056C>G
Drug resistance types
93 Sensitive
11 RR-TB
16 HR-TB
16 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 1 |
| lineage3 | 13 |
| lineage2.2.1 | 27 |
| lineage4.9 | 47 |
| lineage4.3.1.1 | 3 |
| lineage1.2.2.2 | 3 |
| lineage1.1.2 | 2 |
| lineage4.6.3 | 1 |
| lineage4.1.2.1 | 8 |
| lineage3.1.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3.1 | 2 |
| lineage4.4.1.1 | 7 |
| lineage4.8 | 19 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage3.1.1 | 7 |
| lineage4.8;lineage3 | 1 |
| lineage4 | 8 |
| 13 | |
| lineage4.1.1 | 8 |
| lineage4.6.2.2 | 2 |
| lineage4.8.1 | 2 |
| lineage2.2 | 4 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.3.2.1 | 8 |
| lineage4.3.3 | 10 |
| lineage4.1.2 | 1 |
| lineage4.3 | 2 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 6 |
| lineage4;lineage2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage6.3.1 | 2 |
| La2 | 1 |
| lineage4.8;lineage4.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| La1.3 | 1 |
| La1.2 | 3 |
| La1.8.2 | 2 |
| lineage4.6 | 1 |
| lineage4.6.1.2;lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 5 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3 | 2 |
| lineage4.5 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 262 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2179797 | Other | lineage4.2.1.1 | cn | ERR4820746 | RR-TB | lineage3 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR2515129 | Sensitive | lineage2.2.1 | None | ERR2693237 | Other | lineage4.9 | None | SRR6045432 | Other | lineage3 | gb | SRR6045445 | Other | lineage4.3.1.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045572 | Sensitive | lineage4.6.3 | gb | ERR4822154 | Other | lineage4.1.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045846 | Other | lineage4.4.1.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6044937 | HR-TB | lineage4.3.4.2.1 | gb | SRR6045986 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046015 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6045178 | Other | lineage3 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045289 | Other | None | SRR6045332 | Other | lineage4.9 | None | SRR6046767 | RR-TB | lineage2.2.1 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046434 | Sensitive | lineage4.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046761 | Other | lineage3 | gb | ERR502472 | Other | lineage4.6.2.2 | None | SRR6982078 | Sensitive | None | SRR6856042 | Sensitive | lineage2.2.1 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6981912 | Sensitive | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981962 | Sensitive | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982070 | RR-TB | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR5162133 | Other | La1.8.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131068 | Other | lineage4.8 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131257 | Other | lineage6.3.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | DRR120409 | HR-TB | La2 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR7645808 | HR-TB | lineage4.8;lineage4.2.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR4187921 | Other | None | ERR144568 | Pre-XDR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3797043 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769505 | Other | lineage4.9 | None | ERR6198389 | Other | La1.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | ERR6197034 | Other | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR6149870 | Other | La1.8.2 | None | ERR6201802 | Other | La1.2 | None | ERR736816 | Other | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117759 | Other | lineage3 | None | SRR1181161 | Other | lineage4.9 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1175345 | Other | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR13628039 | Sensitive | lineage4.9 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR1791940 | Other | La1.8.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR19576436 | Sensitive | None | SRR19304029 | Other | lineage4.8 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21661642 | HR-TB | lineage4.3.4.2 | None | SRR21686601 | Other | lineage1.2.1.2.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21728339 | Other | lineage3 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR22048374 | Sensitive | lineage4.8 | None | ERR1815548 | Other | La1.8.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR176771 | Sensitive | None | ERR2228941 | Other | lineage4.8 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SRR3675273 | Sensitive | lineage3 | None | ERR192070 | Other | None | ERR2229033 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR3675557 | Other | lineage4.9 | None | ERR2229336 | Other | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | ERR2228873 | Other | lineage4.8 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228822 | Other | lineage4.9 | None | ERR2228874 | Other | lineage4 | None | ERR2513430 | Other | lineage4.1.2.1 | gb | ERR2228888 | Other | lineage4.8 | None | SRR4034769 | Other | lineage4.1.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2513433 | Other | La1.8.1 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None |
|---|
