EBG00000313325 - n.1125_1126delCG
Drug resistance types
93 Sensitive
14 RR-TB
13 HR-TB
19 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 8 |
| lineage4.4.1.1 | 13 |
| lineage2.2.1 | 25 |
| lineage4.1.2.1 | 7 |
| lineage1.1.3.2 | 2 |
| lineage2.2 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.1.1 | 9 |
| lineage4.4 | 1 |
| 8 | |
| lineage4.9 | 16 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage3.1.1 | 6 |
| lineage4.7 | 2 |
| lineage4.3.2.1 | 10 |
| lineage4.4.1 | 1 |
| lineage4.3.3 | 13 |
| lineage4.5;lineage4.4.2 | 1 |
| lineage4.1.2 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.3 | 1 |
| lineage3 | 6 |
| La1.8.1 | 14 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4;La1 | 1 |
| La1 | 1 |
| La1.2 | 3 |
| lineage2.2.2 | 9 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| La1.6 | 2 |
| La1.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.7.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.4 | 1 |
| lineage4.5 | 2 |
| lineage4.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage1.1.2 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 3 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 208 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982419 | Other | lineage4.8 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6824440 | Sensitive | lineage4.5;lineage4.4.2 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981962 | Sensitive | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982070 | RR-TB | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982405 | Sensitive | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR5162108 | Other | La1.8.1 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4187720 | Other | La1.8.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187666 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187921 | Other | None | ERR4188369 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4188396 | Sensitive | La1 | None | ERR4769503 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR4772230 | Other | La1.2 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9117799 | Sensitive | lineage4.8 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR9992612 | Pre-XDR-TB | lineage4.3.3 | None | ERR9787364 | Sensitive | lineage6 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR9992810 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992790 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9992817 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993167 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR9993028 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10993956 | Other | La1.6 | None | SRR10993953 | Other | La1.6 | None | SRR16278292 | Other | La1.4 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR18391683 | Other | La1.7.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR3675463 | Sensitive | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2179737 | HR-TB | lineage4.2 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | ERR4818797 | Other | lineage4.5 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4816303 | Other | lineage4.1.1.3 | gb | ERR4817248 | Other | lineage4.6.2.2 | gb | ERR4818288 | HR-TB | lineage3 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2514756 | Other | lineage3 | gb | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045992 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982078 | Sensitive | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None |
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