EBG00000313339 - n.2951C>A
Drug resistance types
81 Sensitive
8 RR-TB
13 HR-TB
17 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.1.2.1 | 6 |
| lineage4 | 5 |
| lineage1.2.2.2 | 2 |
| lineage4.9 | 20 |
| lineage2.2.1 | 16 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 4 |
| lineage2.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1 | 1 |
| 11 | |
| lineage5.1.4 | 1 |
| lineage4;lineage2 | 1 |
| La1.8.1 | 26 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.4.2.1 | 13 |
| lineage4.9.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1 | 1 |
| lineage4;La1 | 1 |
| La1 | 2 |
| lineage4.8 | 6 |
| La1.3 | 2 |
| La1.2 | 1 |
| lineage1.1.3.2 | 3 |
| lineage6.1.3 | 1 |
| lineage1.1.1 | 1 |
| La1.6 | 2 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2 | 1 |
| lineage3.1.1 | 2 |
| La1.7.1 | 2 |
| La1.4 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.4 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4;lineage1.2.2.1 | 2 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR5818394 | Other | lineage4.9 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | None | SRR6982070 | RR-TB | None | SRR6855939 | Sensitive | lineage2.2.1 | None | ERR502507 | Sensitive | lineage5.1.4 | None | ERR323036 | HR-TB | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR5162108 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311085 | Other | La1.8.1 | None | SRR8600071 | Other | La1.8.1 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR323041 | HR-TB | None | ERR323061 | Sensitive | lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR036191 | Sensitive | lineage4.9.1 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR144568 | Pre-XDR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283009 | Other | La1.8.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797007 | Other | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4188080 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188369 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188396 | Sensitive | La1 | None | ERR473279 | Other | lineage4.9 | None | ERR4407529 | Sensitive | lineage4.8 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4769478 | Other | La1.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR736867 | HR-TB | None | ERR751317 | Sensitive | lineage4.9 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR8774092 | Sensitive | lineage4.1.1.3 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR8774091 | Sensitive | lineage4.1.1.3 | None | SRR10993953 | Other | La1.6 | None | SRR10993944 | Other | La1.6 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR1188341 | Sensitive | lineage4.1.2 | ca | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR124451 | HR-TB | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR16278273 | Other | La1.4 | None | SRR18149443 | Sensitive | lineage3 | None | SRR1792378 | Other | La1.8.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR19428595 | Sensitive | lineage3.1.1 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161113 | Other | lineage4.8 | mw | ERR161047 | Sensitive | lineage4.4.1.1 | None | ERR1679639 | Other | lineage4.6.4 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR176740 | HR-TB | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR5341460 | Other | lineage3 | None | ERR4820478 | Other | lineage3.1.3 | None |
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