TB-Profiler result

Run: 3d09a27c-81ce-48a2-95b8-de6614f23be1
Summary

Run ID: 3d09a27c-81ce-48a2-95b8-de6614f23be1

Sample name:

Date: 01-11-2023 09:06:44

Number of reads: 12461

Percentage reads mapped: 33.81

Median coverage: 0

Strain:

Spoligotype:

Drug-resistance: Sensitive

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
moxifloxacin
levofloxacin
bedaquiline
delamanid
pretomanid
linezolid
streptomycin
amikacin
kanamycin
capreomycin
clofazimine
ethionamide
para-aminosalicylic_acid
cycloserine
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
rpoB 759887 c.81C>T synonymous_variant 0.8 rifampicin
rpoB 759890 c.84A>G synonymous_variant 0.81 rifampicin
rpoB 759893 c.87G>C synonymous_variant 0.88 rifampicin
rpoB 759896 c.90A>T synonymous_variant 0.92 rifampicin
rpoB 759898 p.Asn31Ser missense_variant 0.88 rifampicin
rpoB 759902 c.96G>A synonymous_variant 0.95 rifampicin
rpoB 759903 p.Val33Leu missense_variant 0.91 rifampicin Uncertain significance
rpoB 759914 c.108T>C synonymous_variant 0.99 rifampicin
rpoB 759923 c.117C>T synonymous_variant 0.91 rifampicin
rpoB 759929 c.123A>G synonymous_variant 0.99 rifampicin
rpoB 759934 p.Glu43Ala missense_variant 0.93 rifampicin
rpoB 759941 c.135G>C synonymous_variant 0.89 rifampicin
rpoB 759944 c.138A>C synonymous_variant 1.0 rifampicin
rpoB 759947 c.141C>G synonymous_variant 0.97 rifampicin
rpoB 759950 c.144T>C synonymous_variant 0.89 rifampicin
rpoB 759953 c.147C>T synonymous_variant 0.94 rifampicin
rpoB 759956 c.150C>G synonymous_variant 1.0 rifampicin
rpoB 759962 c.156C>G synonymous_variant 0.9 rifampicin
rpoB 759965 p.Asp53Glu missense_variant 0.98 rifampicin
rpoB 759968 c.162G>C synonymous_variant 0.96 rifampicin
rpoB 759971 c.165C>T synonymous_variant 0.93 rifampicin
rpoB 759974 c.168G>A synonymous_variant 0.94 rifampicin
rpoB 759981 p.Ile59Val missense_variant 0.95 rifampicin
rpoB 759986 c.180T>A synonymous_variant 0.96 rifampicin
rpoB 760001 c.195C>T synonymous_variant 0.96 rifampicin
rpoB 760006 p.Ser67Cys missense_variant 0.94 rifampicin
rpoB 760019 c.213G>C synonymous_variant 0.96 rifampicin
rpoB 760025 p.Asp73Glu missense_variant 1.0 rifampicin
rpoB 760028 c.222C>G synonymous_variant 0.95 rifampicin
rpoB 760034 c.228A>G synonymous_variant 0.95 rifampicin
rpoB 760035 p.Val77Thr missense_variant 0.95 rifampicin
rpoB 760040 c.234T>C synonymous_variant 0.94 rifampicin
rpoB 760046 c.240G>T synonymous_variant 0.93 rifampicin
rpoB 760049 c.243A>G synonymous_variant 0.92 rifampicin
rpoB 760053 p.Val83Ile missense_variant 0.92 rifampicin
rpoB 760058 c.253delT frameshift_variant 1.0 rifampicin
rpoB 760061 c.256dupG frameshift_variant 0.95 rifampicin
rpoB 760067 c.261G>T synonymous_variant 0.96 rifampicin
rpoB 760070 c.264T>G synonymous_variant 0.98 rifampicin
rpoB 760079 c.273G>A synonymous_variant 0.92 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.96 rifampicin
rpoB 760101 c.295T>C synonymous_variant 0.98 rifampicin
rpoB 760110 c.304_306delTCTinsAGC synonymous_variant 0.89 rifampicin
rpoB 760118 c.312T>G synonymous_variant 0.98 rifampicin
rpoB 760121 c.315T>C synonymous_variant 0.97 rifampicin
rpoB 760130 p.Asp108Glu missense_variant 0.98 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.97 rifampicin
rpoB 760181 c.375T>C synonymous_variant 0.99 rifampicin
rpoB 760184 c.378A>G synonymous_variant 1.0 rifampicin
rpoB 760193 c.387C>G synonymous_variant 0.94 rifampicin
rpoB 760196 c.390C>G synonymous_variant 0.99 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.98 rifampicin
rpoB 760244 c.438G>C synonymous_variant 0.93 rifampicin
rpoB 760256 c.450C>T synonymous_variant 0.94 rifampicin
rpoB 760274 p.Glu156Asp missense_variant 0.92 rifampicin Uncertain significance
rpoB 760276 p.Lys157Met missense_variant 0.92 rifampicin
rpoB 760283 c.477G>C synonymous_variant 0.96 rifampicin
rpoB 760298 c.492G>C synonymous_variant 0.98 rifampicin
rpoB 760307 c.501T>C synonymous_variant 0.95 rifampicin
rpoB 760325 c.519G>C synonymous_variant 0.93 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.97 rifampicin
rpoB 760331 c.525G>T synonymous_variant 0.97 rifampicin
rpoB 760337 c.531C>G synonymous_variant 0.9 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.89 rifampicin
rpoB 760343 c.537G>C synonymous_variant 0.91 rifampicin
rpoB 760357 p.Thr184Ser missense_variant 0.93 rifampicin
rpoB 760361 c.555T>C synonymous_variant 0.98 rifampicin
rpoB 760370 c.564C>G synonymous_variant 0.93 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.95 rifampicin
rpoB 760382 c.576G>C synonymous_variant 0.93 rifampicin
rpoB 760388 c.582C>T synonymous_variant 0.92 rifampicin
rpoB 760400 c.594G>C synonymous_variant 0.94 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.97 rifampicin
rpoB 760407 p.Ser201Gly missense_variant 0.91 rifampicin
rpoB 760415 c.609C>T synonymous_variant 0.91 rifampicin
rpoB 760418 c.612G>C synonymous_variant 0.96 rifampicin
rpoB 760430 c.624T>C synonymous_variant 0.95 rifampicin
rpoB 760460 c.654G>C synonymous_variant 0.94 rifampicin
rpoB 760475 c.669A>G synonymous_variant 0.99 rifampicin
rpoB 760481 c.675G>C synonymous_variant 0.92 rifampicin
rpoB 760484 c.678A>G synonymous_variant 0.99 rifampicin
rpoB 760502 c.696C>G synonymous_variant 0.92 rifampicin
rpoB 760522 p.Ser239Asn missense_variant 0.94 rifampicin
rpoB 760532 c.726T>C synonymous_variant 0.97 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.96 rifampicin
rpoB 760561 c.757_758delCG frameshift_variant 0.99 rifampicin
rpoB 760567 p.Ser254Trp missense_variant 0.88 rifampicin
rpoB 760568 c.762_763insGC frameshift_variant 0.92 rifampicin
rpoB 760571 c.765G>C synonymous_variant 0.92 rifampicin
rpoB 760588 p.Thr261Ile missense_variant 0.93 rifampicin
rpoB 760591 p.Val262Ala missense_variant 0.97 rifampicin Uncertain significance
rpoB 760595 c.789C>T synonymous_variant 0.9 rifampicin
rpoB 760596 p.Thr264Pro missense_variant 0.92 rifampicin
rpoB 760608 c.802C>T synonymous_variant 0.94 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.99 rifampicin
rpoB 760634 c.828T>C synonymous_variant 0.96 rifampicin
rpoB 760646 c.840C>G synonymous_variant 0.98 rifampicin
rpoB 760655 c.849A>G synonymous_variant 0.96 rifampicin
rpoB 760661 c.855A>G synonymous_variant 0.98 rifampicin
rpoB 760668 p.Thr288Ala missense_variant 0.93 rifampicin
rpoB 760674 c.868T>C synonymous_variant 0.98 rifampicin
rpoB 760679 c.873A>G synonymous_variant 0.98 rifampicin
rpoB 760683 c.877T>C synonymous_variant 1.0 rifampicin
rpoB 760703 c.897C>T synonymous_variant 0.92 rifampicin
rpoB 760721 c.915C>G synonymous_variant 0.95 rifampicin
rpoB 760727 c.921C>G synonymous_variant 0.94 rifampicin
rpoB 760730 c.924T>C synonymous_variant 0.99 rifampicin
rpoB 760736 c.930C>G synonymous_variant 0.93 rifampicin
rpoB 760748 c.942C>G synonymous_variant 0.88 rifampicin
rpoB 760751 c.945G>C synonymous_variant 0.85 rifampicin
rpoB 760754 c.949_951delCAT conservative_inframe_deletion 1.0 rifampicin
rpoB 760759 p.Val318Gly missense_variant 0.91 rifampicin
rpoB 760763 c.958delG frameshift_variant 0.93 rifampicin
rpoB 760769 c.963C>A synonymous_variant 0.8 rifampicin
rpoB 760772 c.967delA frameshift_variant 0.93 rifampicin
rpoB 760784 c.978G>C synonymous_variant 0.93 rifampicin
rpoB 760787 c.981G>C synonymous_variant 0.93 rifampicin
rpoB 760793 c.987A>G synonymous_variant 0.95 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.98 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 0.99 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 0.97 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 0.96 rifampicin
rpoB 760830 c.1024T>C synonymous_variant 1.0 rifampicin
rpoB 760841 c.1035T>C synonymous_variant 0.99 rifampicin
rpoB 760858 p.Val351Ala missense_variant 0.93 rifampicin
rpoB 760862 c.1056G>C synonymous_variant 0.92 rifampicin
rpoB 760865 c.1059C>T synonymous_variant 0.88 rifampicin
rpoB 760886 p.Glu360Asp missense_variant 0.97 rifampicin
rpoB 760887 p.Thr361Val missense_variant 0.91 rifampicin
rpoB 760910 c.1104C>T synonymous_variant 0.95 rifampicin
rpoB 760916 c.1110C>T synonymous_variant 0.94 rifampicin
rpoB 760928 c.1122G>C synonymous_variant 1.0 rifampicin
rpoB 760943 c.1137C>T synonymous_variant 0.91 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.97 rifampicin
rpoB 760965 p.Met387Leu missense_variant 0.93 rifampicin
rpoB 760970 c.1164G>C synonymous_variant 0.96 rifampicin
rpoB 760973 c.1167G>T synonymous_variant 0.91 rifampicin
rpoB 760982 c.1176G>C synonymous_variant 0.96 rifampicin
rpoB 760985 c.1179G>C synonymous_variant 0.95 rifampicin
rpoB 760988 c.1182C>G synonymous_variant 0.94 rifampicin
rpoB 760991 c.1185G>T synonymous_variant 0.95 rifampicin
rpoB 760997 c.1191G>C synonymous_variant 0.94 rifampicin
rpoB 761006 c.1200C>G synonymous_variant 0.99 rifampicin
rpoB 761015 c.1209G>C synonymous_variant 0.98 rifampicin
rpoB 761027 c.1221A>C synonymous_variant 1.0 rifampicin
rpoB 761036 c.1230G>C synonymous_variant 1.0 rifampicin
rpoB 761037 c.1231T>C synonymous_variant 1.0 rifampicin
rpoB 761051 c.1245G>T synonymous_variant 0.97 rifampicin
rpoB 761054 c.1248G>C synonymous_variant 0.95 rifampicin
rpoB 761060 c.1254C>G synonymous_variant 0.95 rifampicin
rpoB 761063 c.1257C>G synonymous_variant 0.95 rifampicin
rpoB 761084 c.1278C>A synonymous_variant 0.93 rifampicin
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.97 rifampicin
rpoB 761102 c.1296A>G synonymous_variant 0.98 rifampicin
rpoB 761105 c.1299C>T synonymous_variant 0.91 rifampicin
rpoB 761132 c.1326G>C synonymous_variant 0.97 rifampicin
rpoB 761133 c.1327T>C synonymous_variant 0.98 rifampicin
rpoB 761147 c.1341C>T synonymous_variant 0.94 rifampicin
rpoB 761150 c.1344A>T synonymous_variant 0.98 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.87 rifampicin
rpoB 761171 c.1365C>T synonymous_variant 0.9 rifampicin
rpoB 761178 p.Ser458Thr missense_variant 0.92 rifampicin
rpoB 761186 p.Glu460Asp missense_variant 0.92 rifampicin
rpoB 761189 c.1383T>C synonymous_variant 0.97 rifampicin
rpoB 761195 c.1389G>C synonymous_variant 0.96 rifampicin
rpoB 761198 c.1392G>C synonymous_variant 0.93 rifampicin
rpoB 761219 c.1413G>C synonymous_variant 0.95 rifampicin
rpoB 761234 c.1428G>C synonymous_variant 0.94 rifampicin
rpoB 761249 c.1443A>G synonymous_variant 0.91 rifampicin
rpoB 761255 c.1449T>G synonymous_variant 1.0 rifampicin
rpoB 761258 c.1452G>A synonymous_variant 0.92 rifampicin
rpoB 761261 c.1455G>C synonymous_variant 0.88 rifampicin
rpoB 761264 c.1458C>G synonymous_variant 0.89 rifampicin
rpoB 761273 c.1467T>C synonymous_variant 0.98 rifampicin
rpoB 761303 c.1497G>C synonymous_variant 0.93 rifampicin
rpoB 761318 c.1512G>T synonymous_variant 0.94 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.98 rifampicin
rpoB 761333 c.1527G>T synonymous_variant 0.94 rifampicin
rpoB 761339 c.1533C>G synonymous_variant 0.93 rifampicin
rpoB 761354 c.1548C>A synonymous_variant 0.97 rifampicin
rpoB 761357 c.1551G>T synonymous_variant 0.95 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.96 rifampicin
rpoB 761362 p.Ser519Thr missense_variant 1.0 rifampicin
rpoB 761373 p.Val523His missense_variant 0.99 rifampicin
rpoB 761384 c.1578C>G synonymous_variant 0.95 rifampicin
rpoB 761393 c.1587G>A synonymous_variant 0.92 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 0.95 rifampicin
rpoB 761423 c.1617T>C synonymous_variant 0.99 rifampicin
rpoB 761429 c.1623G>C synonymous_variant 0.85 rifampicin
rpoB 761430 p.Ile542Val missense_variant 0.92 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.97 rifampicin
rpoB 761438 c.1632G>C synonymous_variant 0.94 rifampicin
rpoB 761439 p.Asp545Asn missense_variant 0.91 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 1.0 rifampicin
rpoB 761451 p.Val549Thr missense_variant 0.87 rifampicin
rpoB 761457 p.Pro551Glu missense_variant 0.9 rifampicin
rpoB 761460 p.Arg552Lys missense_variant 0.91 rifampicin
rpoB 761463 p.Val553Ile missense_variant 0.88 rifampicin
rpoB 761471 c.1665C>T synonymous_variant 0.96 rifampicin
rpoB 761482 p.Ala559Gly missense_variant 0.9 rifampicin
rpoB 761497 p.Tyr564Phe missense_variant 0.9 rifampicin
rpoB 761502 p.Pro566Ser missense_variant 0.92 rifampicin
rpoB 761505 p.Ser567Ala missense_variant 0.87 rifampicin
rpoB 761508 p.Ser568Thr missense_variant 0.87 rifampicin
rpoB 761516 c.1710G>C synonymous_variant 0.89 rifampicin
rpoB 761528 c.1722C>T synonymous_variant 0.88 rifampicin
rpoB 761531 c.1725C>T synonymous_variant 0.92 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 1.0 rifampicin
rpoB 761555 c.1749G>C synonymous_variant 0.89 rifampicin
rpoB 761558 c.1752C>G synonymous_variant 0.89 rifampicin
rpoB 761564 c.1758G>C synonymous_variant 0.95 rifampicin
rpoB 761570 c.1764T>C synonymous_variant 0.83 rifampicin
rpoB 761573 c.1767C>G synonymous_variant 0.97 rifampicin
rpoB 761579 c.1773G>C synonymous_variant 0.98 rifampicin
rpoB 761612 c.1806G>T synonymous_variant 0.95 rifampicin
rpoB 761615 c.1809A>C synonymous_variant 0.97 rifampicin
rpoB 761636 c.1830G>T synonymous_variant 0.98 rifampicin
rpoB 761645 c.1839C>G synonymous_variant 0.97 rifampicin
rpoB 761657 c.1851C>T synonymous_variant 0.98 rifampicin
rpoB 761666 c.1860G>C synonymous_variant 0.89 rifampicin
rpoB 761669 c.1863C>T synonymous_variant 0.9 rifampicin
rpoB 761675 c.1869G>T synonymous_variant 0.97 rifampicin
rpoB 761681 c.1875G>A synonymous_variant 0.89 rifampicin
rpoB 761682 c.1876C>T synonymous_variant 0.94 rifampicin
rpoB 761687 c.1881C>T synonymous_variant 0.87 rifampicin
rpoB 761690 c.1884G>C synonymous_variant 0.92 rifampicin
rpoB 761693 c.1887G>C synonymous_variant 0.92 rifampicin
rpoB 761705 c.1899C>A synonymous_variant 0.9 rifampicin
rpoB 761727 p.Ser641Gly missense_variant 0.98 rifampicin
rpoB 761728 c.1923dupC frameshift_variant 0.99 rifampicin
rpoB 761732 c.1926C>T synonymous_variant 0.94 rifampicin
rpoB 761741 c.1935G>A synonymous_variant 0.91 rifampicin
rpoB 761750 c.1944G>T synonymous_variant 0.96 rifampicin
rpoB 761760 p.Ile652Val missense_variant 0.91 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.97 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.98 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.97 rifampicin
rpoB 761791 p.Arg662Gln missense_variant 0.94 rifampicin
rpoB 761794 p.Thr663Ser missense_variant 0.9 rifampicin
rpoB 761802 p.Met666Leu missense_variant 0.89 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.92 rifampicin
rpoB 761819 c.2013G>C synonymous_variant 0.95 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 1.0 rifampicin
rpoB 761847 p.Cys681Lys missense_variant 0.93 rifampicin
rpoB 761863 p.Ala686Glu missense_variant 0.91 rifampicin
rpoB 761867 c.2061C>G synonymous_variant 0.88 rifampicin
rpoB 761868 p.Asp688Gln missense_variant 0.85 rifampicin
rpoB 761873 c.2067A>G synonymous_variant 0.99 rifampicin
rpoB 761891 c.2085G>C synonymous_variant 0.95 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.96 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.99 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.99 rifampicin Uncertain significance
rpoB 761916 p.Asp704Asn missense_variant 0.96 rifampicin
rpoB 761924 c.2118G>A synonymous_variant 0.89 rifampicin
rpoB 761930 c.2124G>C synonymous_variant 0.93 rifampicin
rpoB 761933 c.2127G>C synonymous_variant 0.87 rifampicin
rpoB 761936 c.2130C>T synonymous_variant 0.91 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.9 rifampicin
rpoB 761954 c.2148C>A synonymous_variant 0.98 rifampicin
rpoB 761955 p.Ile717Val missense_variant 0.88 rifampicin
rpoB 761969 c.2163G>A synonymous_variant 0.88 rifampicin
rpoB 761990 c.2184G>C synonymous_variant 0.96 rifampicin
rpoB 762008 c.2202C>T synonymous_variant 0.98 rifampicin
rpoB 762014 c.2208C>G synonymous_variant 0.93 rifampicin
rpoB 762038 c.2232C>T synonymous_variant 0.9 rifampicin
rpoB 762047 c.2241G>A synonymous_variant 0.89 rifampicin
rpoB 762053 c.2247T>C synonymous_variant 0.99 rifampicin
rpoB 762056 c.2250G>A synonymous_variant 0.92 rifampicin
rpoB 762065 c.2259T>G synonymous_variant 1.0 rifampicin
rpoB 762083 c.2277T>C synonymous_variant 0.99 rifampicin
rpoB 762086 c.2280G>C synonymous_variant 0.98 rifampicin
rpoB 762101 c.2295C>G synonymous_variant 0.97 rifampicin
rpoB 762114 p.Ile770Val missense_variant 0.99 rifampicin
rpoB 762122 c.2316C>T synonymous_variant 0.89 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.99 rifampicin
rpoB 762134 c.2328C>A synonymous_variant 0.95 rifampicin
rpoB 762137 c.2331C>T synonymous_variant 0.89 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.94 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.96 rifampicin
rpoB 762149 c.2343G>T synonymous_variant 0.93 rifampicin
rpoB 762158 c.2352G>C synonymous_variant 0.92 rifampicin
rpoB 762167 c.2361T>C synonymous_variant 0.99 rifampicin
rpoB 762176 c.2370T>C synonymous_variant 0.94 rifampicin
rpoB 762185 c.2379G>C synonymous_variant 0.99 rifampicin
rpoB 762194 c.2388G>C synonymous_variant 0.91 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.92 rifampicin
rpoB 762245 c.2439G>C synonymous_variant 1.0 rifampicin
rpoB 762275 c.2469C>T synonymous_variant 0.96 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.99 rifampicin
rpoB 762293 c.2487T>C synonymous_variant 0.99 rifampicin
rpoB 762296 c.2490G>C synonymous_variant 0.99 rifampicin
rpoB 762317 c.2511A>G synonymous_variant 0.99 rifampicin
rpoB 762323 c.2517C>A synonymous_variant 0.99 rifampicin
rpoB 762329 c.2523G>C synonymous_variant 0.99 rifampicin
rpoB 762338 c.2532T>C synonymous_variant 0.99 rifampicin
rpoB 762341 c.2535G>C synonymous_variant 0.99 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.98 rifampicin
rpoB 762350 c.2544C>G synonymous_variant 0.99 rifampicin
rpoB 762353 c.2547C>T synonymous_variant 0.91 rifampicin
rpoB 762356 p.Glu850Asp missense_variant 0.99 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.99 rifampicin
rpoB 762368 p.Glu854Asp missense_variant 0.98 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.98 rifampicin
rpoC 762374 c.-996G>T upstream_gene_variant 0.99 rifampicin
rpoC 762380 c.-990T>C upstream_gene_variant 0.98 rifampicin
rpoC 762383 c.-987C>G upstream_gene_variant 0.98 rifampicin
rpoC 762386 c.-984C>T upstream_gene_variant 0.96 rifampicin
rpoC 762392 c.-978G>C upstream_gene_variant 0.98 rifampicin
rpoC 762395 c.-975G>T upstream_gene_variant 0.98 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.98 rifampicin
rpoC 762404 c.-966T>C upstream_gene_variant 1.0 rifampicin
rpoC 762410 c.-960T>G upstream_gene_variant 1.0 rifampicin
rrs 1471878 n.33C>T non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin Uncertain significance
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1471962 n.117A>G non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.97 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 0.97 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471985 n.140T>G non_coding_transcript_exon_variant 0.88 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1471986 n.141C>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472019 n.174G>C non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472023 n.178G>A non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.97 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472083 n.238G>T non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472086 n.241T>G non_coding_transcript_exon_variant 0.87 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472089 n.244C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.76 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472127 n.282C>T non_coding_transcript_exon_variant 0.8 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472128 n.283G>C non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.74 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.93 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.88 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472256 n.411T>A non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.96 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472389 n.544G>A non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472405 n.560C>T non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472412 n.567A>G non_coding_transcript_exon_variant 0.81 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472415 n.570T>G non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472451 n.606C>G non_coding_transcript_exon_variant 0.88 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472477 n.632T>A non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472480 n.635G>T non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.94 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472655 n.810G>A non_coding_transcript_exon_variant 0.94 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472658 n.813G>A non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472716 n.871C>T non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472719 n.874G>A non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 0.87 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.84 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472870 n.1025T>G non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472959 n.1114T>A non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473004 n.1159T>A non_coding_transcript_exon_variant 0.81 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.85 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473062 n.1217T>A non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473068 n.1223A>G non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473094 n.1249T>A non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473148 n.1303G>A non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1473163 n.1318C>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.92 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473173 n.1328C>T non_coding_transcript_exon_variant 0.71 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473192 n.1347A>G non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473202 n.1357C>T non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473205 n.1360T>C non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1473249 n.1404T>C non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473254 n.1409A>G non_coding_transcript_exon_variant 0.82 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1473274 n.1429C>T non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473290 n.1445C>A non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473319 n.1474C>T non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473322 n.1477T>C non_coding_transcript_exon_variant 0.81 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473327 n.1482A>G non_coding_transcript_exon_variant 0.91 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473328 n.1483C>T non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin