TB-Profiler result

Run: 9d36b96c-a5e3-4f37-b9c9-fd45ebed6ab1
Summary

Run ID: 9d36b96c-a5e3-4f37-b9c9-fd45ebed6ab1

Sample name:

Date: 01-11-2023 10:03:45

Number of reads: 26302

Percentage reads mapped: 31.92

Median coverage: 0

Strain:

Spoligotype:

Drug-resistance: Sensitive

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
moxifloxacin
levofloxacin
bedaquiline
delamanid
pretomanid
linezolid
streptomycin
amikacin
kanamycin
capreomycin
clofazimine
ethionamide
para-aminosalicylic_acid
cycloserine
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
rpoB 759896 c.90A>G synonymous_variant 0.94 rifampicin
rpoB 759902 c.96G>A synonymous_variant 0.98 rifampicin
rpoB 759905 c.99C>T synonymous_variant 0.98 rifampicin
rpoB 759908 c.102C>A synonymous_variant 0.98 rifampicin
rpoB 759911 c.105C>T synonymous_variant 0.9 rifampicin
rpoB 759914 c.108T>C synonymous_variant 1.0 rifampicin
rpoB 759920 c.114G>C synonymous_variant 0.98 rifampicin
rpoB 759923 c.117C>T synonymous_variant 0.97 rifampicin
rpoB 759929 c.123A>G synonymous_variant 0.99 rifampicin
rpoB 759944 c.138A>G synonymous_variant 0.94 rifampicin
rpoB 759947 c.141C>A synonymous_variant 0.89 rifampicin
rpoB 759950 c.144T>C synonymous_variant 0.92 rifampicin
rpoB 759956 c.150C>T synonymous_variant 0.97 rifampicin
rpoB 759968 c.162G>C synonymous_variant 1.0 rifampicin
rpoB 759974 p.Glu56Asp missense_variant 1.0 rifampicin
rpoB 759980 c.174G>C synonymous_variant 0.98 rifampicin
rpoB 759981 p.Ile59Val missense_variant 0.99 rifampicin
rpoB 759986 c.181_182delTC frameshift_variant 1.0 rifampicin
rpoB 759991 p.Pro62Arg missense_variant 0.97 rifampicin
rpoB 759995 c.189C>A synonymous_variant 0.98 rifampicin
rpoB 760012 p.Ala69Val missense_variant 0.98 rifampicin
rpoB 760016 p.Glu70Asp missense_variant 0.91 rifampicin
rpoB 760019 c.213G>C synonymous_variant 0.9 rifampicin
rpoB 760022 c.216T>C synonymous_variant 0.95 rifampicin
rpoB 760024 c.219delT frameshift_variant 1.0 rifampicin
rpoB 760027 p.Val74Asp missense_variant 0.98 rifampicin
rpoB 760040 c.234T>C synonymous_variant 0.98 rifampicin
rpoB 760046 c.240G>C synonymous_variant 0.98 rifampicin
rpoB 760059 p.Tyr85Glu missense_variant 0.99 rifampicin
rpoB 760067 c.261G>C synonymous_variant 0.98 rifampicin
rpoB 760070 c.264T>C synonymous_variant 0.95 rifampicin
rpoB 760082 c.276C>T synonymous_variant 0.98 rifampicin
rpoB 760088 c.282C>G synonymous_variant 0.92 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.98 rifampicin
rpoB 760101 c.295T>C synonymous_variant 0.98 rifampicin
rpoB 760104 c.298_300delTCGinsAGC synonymous_variant 0.95 rifampicin
rpoB 760112 c.306T>C synonymous_variant 0.97 rifampicin
rpoB 760118 c.312T>G synonymous_variant 0.99 rifampicin
rpoB 760121 c.315T>C synonymous_variant 0.99 rifampicin
rpoB 760130 p.Asp108Glu missense_variant 0.99 rifampicin Uncertain significance
rpoB 760136 c.330G>A synonymous_variant 0.96 rifampicin
rpoB 760139 c.333A>T synonymous_variant 0.98 rifampicin
rpoB 760142 c.336C>G synonymous_variant 0.94 rifampicin
rpoB 760178 c.372G>A synonymous_variant 0.99 rifampicin
rpoB 760181 c.375T>C synonymous_variant 1.0 rifampicin
rpoB 760184 c.378A>G synonymous_variant 1.0 rifampicin
rpoB 760196 c.390C>G synonymous_variant 0.99 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.98 rifampicin
rpoB 760244 c.438G>C synonymous_variant 0.98 rifampicin
rpoB 760283 c.477G>C synonymous_variant 0.99 rifampicin
rpoB 760298 c.492G>C synonymous_variant 0.99 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.97 rifampicin
rpoB 760316 c.510C>G synonymous_variant 0.96 rifampicin
rpoB 760325 c.519G>C synonymous_variant 0.95 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.98 rifampicin
rpoB 760334 c.528G>T synonymous_variant 0.99 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.97 rifampicin
rpoB 760357 p.Thr184Ser missense_variant 1.0 rifampicin
rpoB 760361 c.555T>C synonymous_variant 0.99 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.99 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.98 rifampicin
rpoB 760407 p.Ser201Gly missense_variant 0.99 rifampicin
rpoB 760415 c.609C>T synonymous_variant 0.98 rifampicin
rpoB 760424 c.618C>G synonymous_variant 0.98 rifampicin
rpoB 760430 c.624T>C synonymous_variant 0.97 rifampicin
rpoB 760457 c.651C>T synonymous_variant 0.98 rifampicin
rpoB 760463 c.657C>T synonymous_variant 0.98 rifampicin
rpoB 760475 c.669A>G synonymous_variant 0.99 rifampicin
rpoB 760478 c.672C>T synonymous_variant 0.98 rifampicin
rpoB 760481 c.675G>T synonymous_variant 0.98 rifampicin
rpoB 760484 c.678A>G synonymous_variant 0.99 rifampicin
rpoB 760502 c.696C>G synonymous_variant 0.97 rifampicin
rpoB 760522 p.Ser239Asn missense_variant 0.99 rifampicin
rpoB 760532 c.726T>C synonymous_variant 0.99 rifampicin
rpoB 760533 p.Val243Thr missense_variant 0.98 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.99 rifampicin
rpoB 760547 c.741G>C synonymous_variant 0.99 rifampicin
rpoB 760561 c.757_758delCG frameshift_variant 1.0 rifampicin
rpoB 760567 p.Ser254Trp missense_variant 0.95 rifampicin
rpoB 760568 c.762_763insGC frameshift_variant 0.99 rifampicin
rpoB 760571 c.765G>C synonymous_variant 0.99 rifampicin
rpoB 760585 p.Asn260Ser missense_variant 0.98 rifampicin
rpoB 760591 p.Val262Ala missense_variant 0.99 rifampicin Uncertain significance
rpoB 760595 c.789C>T synonymous_variant 0.95 rifampicin
rpoB 760596 p.Thr264Pro missense_variant 0.99 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.99 rifampicin
rpoB 760646 c.840C>G synonymous_variant 0.98 rifampicin
rpoB 760655 c.849A>G synonymous_variant 0.98 rifampicin
rpoB 760661 c.855A>C synonymous_variant 0.99 rifampicin
rpoB 760670 c.864G>C synonymous_variant 1.0 rifampicin
rpoB 760674 c.868T>C synonymous_variant 0.99 rifampicin
rpoB 760679 c.873A>G synonymous_variant 0.99 rifampicin
rpoB 760683 c.877T>C synonymous_variant 1.0 rifampicin
rpoB 760721 c.915C>G synonymous_variant 0.97 rifampicin
rpoB 760724 c.918T>C synonymous_variant 0.99 rifampicin
rpoB 760730 c.924T>C synonymous_variant 0.99 rifampicin
rpoB 760748 c.942C>G synonymous_variant 0.98 rifampicin
rpoB 760751 c.945G>C synonymous_variant 0.98 rifampicin
rpoB 760755 p.His317Asn missense_variant 0.99 rifampicin
rpoB 760759 p.Val318Ala missense_variant 1.0 rifampicin
rpoB 760764 p.Glu320Gln missense_variant 0.99 rifampicin
rpoB 760769 c.963C>G synonymous_variant 0.98 rifampicin
rpoB 760784 c.978G>T synonymous_variant 0.99 rifampicin
rpoB 760793 c.987A>G synonymous_variant 0.98 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.99 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 0.99 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 1.0 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 0.99 rifampicin
rpoB 760830 c.1024T>C synonymous_variant 0.99 rifampicin
rpoB 760841 c.1035T>C synonymous_variant 1.0 rifampicin
rpoB 760859 c.1053T>C synonymous_variant 0.95 rifampicin
rpoB 760862 c.1056G>C synonymous_variant 0.98 rifampicin
rpoB 760877 c.1071G>C synonymous_variant 0.99 rifampicin
rpoB 760883 c.1077G>C synonymous_variant 0.98 rifampicin
rpoB 760886 c.1080A>G synonymous_variant 0.99 rifampicin
rpoB 760887 p.Thr361Val missense_variant 0.99 rifampicin
rpoB 760910 c.1104C>T synonymous_variant 0.99 rifampicin
rpoB 760916 c.1110C>T synonymous_variant 0.98 rifampicin
rpoB 760919 c.1113C>T synonymous_variant 0.99 rifampicin
rpoB 760925 c.1119T>C synonymous_variant 0.99 rifampicin
rpoB 760928 c.1122G>C synonymous_variant 0.99 rifampicin
rpoB 760931 c.1125C>G synonymous_variant 0.98 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.97 rifampicin
rpoB 760958 c.1152G>C synonymous_variant 0.99 rifampicin
rpoB 760965 p.Met387Leu missense_variant 1.0 rifampicin
rpoB 760970 c.1164G>C synonymous_variant 0.98 rifampicin
rpoB 760973 c.1167G>C synonymous_variant 0.99 rifampicin
rpoB 760982 c.1176G>C synonymous_variant 0.99 rifampicin
rpoB 760985 c.1179G>C synonymous_variant 0.98 rifampicin
rpoB 760988 c.1182C>G synonymous_variant 0.99 rifampicin
rpoB 760991 c.1185G>T synonymous_variant 0.98 rifampicin
rpoB 760997 c.1191G>C synonymous_variant 0.99 rifampicin
rpoB 761015 c.1209G>C synonymous_variant 0.99 rifampicin
rpoB 761027 c.1221A>C synonymous_variant 0.99 rifampicin
rpoB 761036 c.1230G>C synonymous_variant 0.99 rifampicin
rpoB 761037 c.1231T>C synonymous_variant 0.99 rifampicin
rpoB 761051 c.1245G>T synonymous_variant 0.99 rifampicin
rpoB 761054 c.1248G>C synonymous_variant 0.99 rifampicin
rpoB 761057 c.1251G>C synonymous_variant 0.98 rifampicin
rpoB 761060 c.1254C>G synonymous_variant 0.99 rifampicin
rpoB 761063 c.1257C>G synonymous_variant 0.99 rifampicin
rpoB 761084 c.1278C>A synonymous_variant 0.97 rifampicin
rpoB 761087 c.1281C>G synonymous_variant 0.93 rifampicin
rpoB 761088 c.1282_1284delAGCinsTCG synonymous_variant 0.97 rifampicin
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.98 rifampicin
rpoB 761102 c.1296A>G synonymous_variant 0.98 rifampicin
rpoB 761111 c.1305C>T synonymous_variant 0.98 rifampicin
rpoB 761132 c.1326G>T synonymous_variant 0.94 rifampicin
rpoB 761133 c.1327T>C synonymous_variant 0.96 rifampicin
rpoB 761147 c.1341C>T synonymous_variant 0.98 rifampicin
rpoB 761150 c.1344A>T synonymous_variant 0.99 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.93 rifampicin
rpoB 761180 c.1374A>C synonymous_variant 0.99 rifampicin
rpoB 761189 c.1383T>C synonymous_variant 0.98 rifampicin
rpoB 761195 c.1389G>C synonymous_variant 0.99 rifampicin
rpoB 761198 c.1392G>T synonymous_variant 0.99 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 0.99 rifampicin
rpoB 761217 p.Pro471Ser missense_variant 0.98 rifampicin
rpoB 761234 c.1428G>C synonymous_variant 0.98 rifampicin
rpoB 761249 c.1443A>G synonymous_variant 0.97 rifampicin
rpoB 761261 c.1455G>T synonymous_variant 0.96 rifampicin
rpoB 761264 c.1458C>G synonymous_variant 0.97 rifampicin
rpoB 761282 c.1476C>T synonymous_variant 0.98 rifampicin
rpoB 761288 c.1482G>T synonymous_variant 0.99 rifampicin
rpoB 761318 c.1512G>T synonymous_variant 0.96 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.97 rifampicin
rpoB 761330 c.1524G>C synonymous_variant 0.99 rifampicin
rpoB 761345 c.1539G>C synonymous_variant 0.99 rifampicin
rpoB 761354 c.1548C>T synonymous_variant 0.98 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.99 rifampicin
rpoB 761362 p.Ser519Thr missense_variant 0.99 rifampicin
rpoB 761367 p.Glu521Gln missense_variant 0.98 rifampicin
rpoB 761374 p.Val523Asp missense_variant 0.99 rifampicin
rpoB 761408 c.1602G>C synonymous_variant 0.98 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 0.99 rifampicin
rpoB 761423 c.1617T>C synonymous_variant 0.99 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.99 rifampicin
rpoB 761436 p.Ala544Pro missense_variant 0.98 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 0.99 rifampicin
rpoB 761447 c.1641C>G synonymous_variant 0.99 rifampicin
rpoB 761451 p.Val549Thr missense_variant 0.97 rifampicin
rpoB 761457 p.Pro551Asp missense_variant 0.95 rifampicin
rpoB 761466 p.Leu554Met missense_variant 0.98 rifampicin
rpoB 761471 c.1665C>T synonymous_variant 0.98 rifampicin
rpoB 761474 c.1668C>T synonymous_variant 0.98 rifampicin
rpoB 761477 c.1671C>T synonymous_variant 0.98 rifampicin
rpoB 761482 p.Ala559Gly missense_variant 0.97 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.97 rifampicin
rpoB 761496 p.Tyr564Asn missense_variant 0.99 rifampicin
rpoB 761502 p.Pro566Ala missense_variant 0.94 rifampicin
rpoB 761505 p.Ser567Pro missense_variant 0.98 rifampicin Uncertain significance
rpoB 761510 c.1704T>C synonymous_variant 0.98 rifampicin
rpoB 761513 p.Glu569Asp missense_variant 0.99 rifampicin
rpoB 761516 c.1710G>C synonymous_variant 0.98 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.98 rifampicin
rpoB 761552 c.1746G>C synonymous_variant 0.98 rifampicin
rpoB 761555 c.1749G>C synonymous_variant 0.99 rifampicin
rpoB 761558 c.1752C>G synonymous_variant 0.99 rifampicin
rpoB 761570 c.1764T>C synonymous_variant 0.94 rifampicin
rpoB 761573 c.1767C>G synonymous_variant 0.97 rifampicin
rpoB 761579 c.1773G>C synonymous_variant 0.99 rifampicin
rpoB 761600 c.1794T>C synonymous_variant 0.99 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.99 rifampicin
rpoB 761612 c.1806G>T synonymous_variant 0.96 rifampicin
rpoB 761615 c.1809A>C synonymous_variant 0.98 rifampicin
rpoB 761636 c.1830G>T synonymous_variant 0.99 rifampicin
rpoB 761645 c.1839C>G synonymous_variant 0.98 rifampicin
rpoB 761648 c.1842T>C synonymous_variant 1.0 rifampicin
rpoB 761666 c.1860G>C synonymous_variant 0.97 rifampicin
rpoB 761669 c.1863C>T synonymous_variant 0.99 rifampicin
rpoB 761675 c.1869G>T synonymous_variant 0.98 rifampicin
rpoB 761690 c.1884G>C synonymous_variant 0.99 rifampicin
rpoB 761708 c.1902C>T synonymous_variant 0.98 rifampicin
rpoB 761712 p.Val636Ile missense_variant 0.98 rifampicin
rpoB 761722 p.Glu639Gly missense_variant 0.98 rifampicin Uncertain significance
rpoB 761727 p.Ser641Gly missense_variant 0.99 rifampicin
rpoB 761736 p.Ile644Val missense_variant 0.96 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.96 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.99 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.98 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.98 rifampicin
rpoB 761785 p.Thr660Ser missense_variant 0.98 rifampicin
rpoB 761791 p.Arg662His missense_variant 0.98 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.97 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.99 rifampicin
rpoB 761847 p.Cys681Arg missense_variant 0.98 rifampicin Uncertain significance
rpoB 761852 c.2046C>G synonymous_variant 0.98 rifampicin
rpoB 761862 c.2057dupC frameshift_variant 0.99 rifampicin
rpoB 761867 c.2062delG frameshift_variant 1.0 rifampicin
rpoB 761870 p.Asp688Glu missense_variant 0.99 rifampicin
rpoB 761873 c.2067A>T synonymous_variant 0.99 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 1.0 rifampicin
rpoB 761891 c.2085G>C synonymous_variant 0.99 rifampicin
rpoB 761892 p.Ile696Val missense_variant 0.99 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.98 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.99 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.99 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.98 rifampicin Uncertain significance
rpoB 761916 p.Asp704Asn missense_variant 0.97 rifampicin
rpoB 761921 c.2115C>T synonymous_variant 0.98 rifampicin
rpoB 761930 c.2124G>C synonymous_variant 0.99 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.98 rifampicin
rpoB 761954 c.2148C>G synonymous_variant 0.99 rifampicin
rpoB 762008 c.2202C>T synonymous_variant 0.98 rifampicin
rpoB 762014 c.2208C>T synonymous_variant 0.95 rifampicin
rpoB 762047 c.2241G>A synonymous_variant 0.98 rifampicin
rpoB 762053 c.2247T>C synonymous_variant 0.99 rifampicin
rpoB 762062 c.2256T>C synonymous_variant 0.99 rifampicin
rpoB 762065 c.2259T>C synonymous_variant 1.0 rifampicin
rpoB 762083 c.2277T>C synonymous_variant 0.99 rifampicin
rpoB 762086 c.2280G>C synonymous_variant 0.98 rifampicin
rpoB 762101 c.2295C>G synonymous_variant 0.99 rifampicin
rpoB 762114 p.Ile770Val missense_variant 0.99 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.98 rifampicin
rpoB 762137 c.2331C>T synonymous_variant 0.98 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.99 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.99 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.99 rifampicin
rpoB 762158 c.2352G>C synonymous_variant 0.99 rifampicin
rpoB 762167 c.2361T>C synonymous_variant 0.99 rifampicin
rpoB 762176 c.2370T>C synonymous_variant 0.98 rifampicin
rpoB 762185 c.2379G>C synonymous_variant 0.99 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.99 rifampicin
rpoB 762245 c.2439G>C synonymous_variant 0.99 rifampicin
rpoB 762284 c.2478G>T synonymous_variant 0.98 rifampicin
rpoB 762287 c.2481C>T synonymous_variant 0.95 rifampicin
rpoB 762293 c.2487T>C synonymous_variant 0.99 rifampicin
rpoB 762308 c.2502G>C synonymous_variant 0.98 rifampicin
rpoB 762317 c.2511A>G synonymous_variant 0.99 rifampicin
rpoB 762329 c.2523G>C synonymous_variant 0.99 rifampicin
rpoB 762338 c.2532T>C synonymous_variant 0.98 rifampicin
rpoB 762341 c.2535G>C synonymous_variant 0.99 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.92 rifampicin
rpoB 762350 c.2544C>T synonymous_variant 0.94 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.99 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.99 rifampicin
rpoC 762374 c.-996G>C upstream_gene_variant 0.99 rifampicin
rpoC 762395 c.-975G>C upstream_gene_variant 0.97 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.97 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.99 rifampicin
rpoC 762404 c.-966T>C upstream_gene_variant 0.99 rifampicin
rpoC 762410 c.-960T>C upstream_gene_variant 1.0 rifampicin
rrs 1471878 n.33C>T non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin Uncertain significance
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1471962 n.117A>G non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.96 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471986 n.141C>G non_coding_transcript_exon_variant 0.88 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472019 n.174G>C non_coding_transcript_exon_variant 0.81 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472023 n.178G>A non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472083 n.238G>T non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472086 n.241T>G non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472089 n.244C>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.79 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472127 n.282C>T non_coding_transcript_exon_variant 0.91 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.88 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472259 n.414C>A non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.94 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472412 n.567A>G non_coding_transcript_exon_variant 0.84 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472415 n.570T>G non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472456 n.611T>C non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472473 n.628G>T non_coding_transcript_exon_variant 0.76 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472477 n.632T>A non_coding_transcript_exon_variant 0.77 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472480 n.635G>T non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472507 n.662C>G non_coding_transcript_exon_variant 0.9 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.83 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.8 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 0.89 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472655 n.810G>A non_coding_transcript_exon_variant 0.96 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472658 n.813G>A non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 0.89 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.79 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472870 n.1025T>G non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.82 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.8 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473062 n.1217T>A non_coding_transcript_exon_variant 0.98 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473068 n.1223A>G non_coding_transcript_exon_variant 0.87 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.86 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.85 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473148 n.1303G>A non_coding_transcript_exon_variant 0.78 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1473163 n.1318C>T non_coding_transcript_exon_variant 0.79 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.83 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473192 n.1347A>G non_coding_transcript_exon_variant 0.73 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473202 n.1357C>T non_coding_transcript_exon_variant 0.79 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473205 n.1360T>C non_coding_transcript_exon_variant 0.72 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1473249 n.1404T>C non_coding_transcript_exon_variant 0.97 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473319 n.1474C>T non_coding_transcript_exon_variant 0.95 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473327 n.1482A>G non_coding_transcript_exon_variant 0.95 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473328 n.1483C>T non_coding_transcript_exon_variant 0.86 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
clpC1 4038602 c.2103G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038623 c.2082A>G synonymous_variant 1.0 pyrazinamide
clpC1 4038640 p.Asp689Asn missense_variant 0.9 pyrazinamide
clpC1 4038647 c.2058T>G synonymous_variant 1.0 pyrazinamide
clpC1 4038658 p.Lys683Gln missense_variant 0.89 pyrazinamide
clpC1 4038661 p.Ser682Thr missense_variant 1.0 pyrazinamide
clpC1 4038662 c.2043T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038671 c.2034T>G synonymous_variant 1.0 pyrazinamide
clpC1 4038679 p.Pro676Ala missense_variant 1.0 pyrazinamide
clpC1 4038683 c.2022T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038695 c.2010C>G synonymous_variant 1.0 pyrazinamide
clpC1 4038704 c.2001T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038710 c.1995G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038713 c.1992T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038725 c.1980C>G synonymous_variant 1.0 pyrazinamide
clpC1 4038740 c.1965G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038755 c.1950G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038767 c.1938G>T synonymous_variant 1.0 pyrazinamide
clpC1 4038770 c.1935C>T synonymous_variant 1.0 pyrazinamide
clpC1 4038773 c.1932T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038776 c.1929G>A synonymous_variant 1.0 pyrazinamide
clpC1 4038779 c.1926C>G synonymous_variant 1.0 pyrazinamide
clpC1 4038782 c.1923G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038790 c.1915C>T synonymous_variant 1.0 pyrazinamide
clpC1 4038812 c.1893T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038815 c.1890G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038842 c.1863G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038878 c.1827A>G synonymous_variant 1.0 pyrazinamide
clpC1 4038890 c.1815G>A synonymous_variant 1.0 pyrazinamide
clpC1 4038905 c.1800A>G synonymous_variant 0.9 pyrazinamide
clpC1 4038908 c.1797C>G synonymous_variant 0.82 pyrazinamide
clpC1 4038911 c.1794G>T synonymous_variant 1.0 pyrazinamide
clpC1 4038914 c.1791G>C synonymous_variant 0.9 pyrazinamide
clpC1 4038917 c.1788C>T synonymous_variant 0.8 pyrazinamide
clpC1 4038923 c.1782A>G synonymous_variant 0.91 pyrazinamide
clpC1 4038941 c.1764G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038953 c.1752A>G synonymous_variant 1.0 pyrazinamide
clpC1 4038956 c.1749T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038965 c.1740T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038971 c.1734T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038974 c.1731T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038989 c.1716T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038997 c.1708T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039022 c.1683A>G synonymous_variant 0.9 pyrazinamide
clpC1 4039046 c.1659C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039064 c.1641C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039067 c.1638G>C synonymous_variant 1.0 pyrazinamide