EBG00000313325 - n.395G>C


Drug resistance types
190 Sensitive 9 RR-TB 59 HR-TB 29 MDR-TB 28 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage4.8 4
lineage4 5
lineage4.9 98
lineage2.2.1 60
lineage4.3.4.2;lineage4.9 1
lineage3 26
lineage1.1.2 16
lineage2.2.2 26
lineage2;lineage4.9 2
lineage4.4.2 3
lineage4.3.2 1
La1.2.BCG 9
lineage2.2.1;lineage2.2.2 4
lineage3.1;lineage4.6.1.1 1
lineage5.1.4 2
lineage4.6.1.1 5
lineage2.2.2;lineage4 7
lineage1.2.2.2 6
lineage2.2.1;lineage4 3
lineage4.1.2.1 4
lineage1.1.3.3 1
lineage4.1.2 4
lineage4.3.4.2.1 4
lineage4.3.4.2 1
lineage4.4.1.1 3
lineage4.5 5
lineage4.4.1.2 1
lineage6.2.1 3
lineage2.2;lineage4.9 2
lineage5.1.1 2
lineage4.3.3 6
lineage6.1.1 2
lineage2.2.1.2 3
lineage4.1.1.3 4
lineage4.4.1.1.1 1
lineage2.2.1.1 5
lineage3.1 2
lineage4.8.1 2
La1.7;lineage4.9 1
lineage4.2;lineage4.9 1
lineage4.6.1.2 1
lineage4.3.4.1 1
lineage3.1;lineage4 1
lineage1.1.3.2 2
lineage3.1.1 2
lineage2.2.1.1;lineage4 1
lineage4.1.1.1 1
lineage5.1.2 1
lineage4.6.5 1
lineage4.6.2.2 2
lineage1.1.3.1 1
lineage4.1.3 1
lineage4.2.1.1 4
lineage2.2;lineage4 2
lineage2.2;lineage3 1
lineage4.3.4.1;lineage4.9 1
lineage2.2.1;lineage3 1
lineage2.1 1
lineage5.1 1
lineage1.1.1.1 1
lineage6.2.3 1
lineage1.2.1.2 2
lineage4.1 1
lineage2 1
lineage4.1.2.1;lineage4.9 1
lineage4.6.3 1
spoligotype Counts
spoligotype Count
None 370
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7535080 Sensitive lineage4.8 None
SRR16100231 Other lineage4 None
SRR1173421 Other lineage4.9 None
ERR2124090 MDR-TB lineage2.2.1 None
SRR1174277 HR-TB lineage2.2.1 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
SRR1183325 Other lineage4.9 None
SRR1173105 MDR-TB lineage3 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1173508 Sensitive lineage4.9 None
SRR7444102 Sensitive lineage4.9 None
SRR7444101 Sensitive lineage4.9 None
SRR1172293 Sensitive lineage1.1.2 None
ERR4829238 Sensitive lineage3 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR560438 Other lineage4.9 None
SRR1172267 Sensitive lineage1.1.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR13591376 Sensitive lineage4.3.2 None
SAMN02599061 MDR-TB lineage3 None
SRR1915485 Other La1.2.BCG None
SRR7443738 Sensitive lineage4.9 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR8375619 Sensitive lineage1.1.2 None
SRR1173565 MDR-TB lineage3.1;lineage4.6.1.1 None
ERR4817817 Sensitive lineage3 None
SRR1173599 Sensitive lineage1.1.2 None
ERR1140797 Sensitive lineage5.1.4 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR7443760 Sensitive lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1172710 Sensitive lineage1.2.2.2 None
SRR1175096 Sensitive lineage1.2.2.2 None
SRR1173013 Sensitive lineage1.1.2 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR7443735 Sensitive lineage4.9 None
ERR1140771 Sensitive lineage2.2.1 None
SRR7443769 Sensitive lineage4 None
SRR7444084 Sensitive lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
ERR2027233 Sensitive lineage4.1.2.1 None
SRR7444098 Sensitive lineage4.9 None
SRR6045312 Other lineage1.1.3.3 None
SRR7443748 Sensitive lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
ERR970455 RR-TB lineage4.1.2 None
SRR1057937 Sensitive lineage4.9 None
SRR1173705 Other lineage4.9 None
SRR1173686 MDR-TB lineage3 None
ERR405190 Sensitive lineage4.9 None
ERR245790 Sensitive lineage4.3.4.2.1 None
SRR1013589 HR-TB lineage2.2.1 None
ERR10796635 Other lineage4.8 None
ERR473311 Sensitive lineage4.9 None
SRR7443749 Sensitive lineage4.9 None
SRR7444074 Sensitive lineage4.9 None
SRR7443757 Sensitive lineage4.9 None
ERR405191 Sensitive lineage4.9 None
ERR2124091 Pre-XDR-TB lineage4.3.4.2 None
SRR6407487 Other lineage4.9 None
ERR10796625 Other lineage4.4.1.1 None
ERR2446544 Sensitive lineage3 nl
ERR971388 Sensitive lineage4.9 None
SAMN02598976 Sensitive lineage1.2.2.2 None
SRR7444072 Sensitive lineage4.9 None
SRR11972169 HR-TB lineage2.2.1 None
SRR7443785 Sensitive lineage4.9 None
SRR1013612 Sensitive lineage4.5 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR7443733 Sensitive lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
ERR1140776 Sensitive lineage6.2.1 None
ERR2515447 Sensitive lineage2.2.1 None
SRR1169591 Sensitive lineage1.1.2 None
SRR1013614 Sensitive lineage2.2.1 None
SRR1048852 HR-TB lineage2.2;lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
ERR1140774 Sensitive lineage5.1.1 None
SRR11342680 Other lineage4.8 None
ERR3275548 Sensitive lineage3 nl
SRR11342682 Other lineage4.1.2 None
SAMN02567670 Sensitive lineage4.6.1.1 None
ERR1140787 Sensitive lineage4.3.3 None
SRR15368973 Other lineage4.9 None
ERR1034791 MDR-TB lineage4.9 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
ERR2510831 Other lineage4.3.3 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR1140767 Sensitive lineage6.1.1 None
ERR2515999 Other lineage4.3.4.2.1 None
SRR7453032 Sensitive lineage2.2.1.2 None
ERR1140785 Sensitive lineage1.1.2 None
ERR970458 RR-TB lineage4.1.1.3 None
SRR7444103 Sensitive lineage4.9 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR7086711 Other La1.2.BCG None
SAMN02599089 MDR-TB lineage3 None
SAMN02598968 HR-TB lineage1.2.2.2 None
SRR7444073 Sensitive lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR1048982 HR-TB lineage2.2.1.1 None
SRR7443751 Sensitive lineage4.9 None
SRR7443752 Sensitive lineage4.9 None
SRR7443790 Sensitive lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR7443722 Sensitive lineage4.9 None
ERR1140762 Sensitive lineage3.1 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR11342646 HR-TB lineage3 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4831837 MDR-TB lineage2.2.1 None
SRR1168955 Sensitive lineage4.2;lineage4.9 None
SRR1172861 MDR-TB lineage3 None
ERR405217 Sensitive lineage2.2.1 None
SRR7443761 Sensitive lineage4.9 None
ERR1873445 MDR-TB lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR10869085 Sensitive lineage2.2.1 None
ERR2517457 Sensitive lineage3 None
SAMN02360577 HR-TB lineage3 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1173719 Other lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR6855896 Other lineage4.3.4.2.1 None
SRR1173566 Other lineage1.1.2 None
ERR1140786 Sensitive lineage6.1.1 None
ERR970453 RR-TB lineage4.1.2 None
SRR1173014 MDR-TB lineage3 None
SRR7443728 Sensitive lineage4.9 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
SRR7535077 Sensitive lineage4.6.1.2 None
SRR1173621 MDR-TB lineage3 None
ERR1193714 Sensitive lineage4.3.4.1 None
ERR405222 Sensitive lineage3.1;lineage4 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
ERR1873557 Pre-XDR-TB lineage2.2.1 None
SAMN02598961 Sensitive lineage1.1.2 None
SRR1181582 Other lineage4.9 None
SRR1169574 Sensitive lineage1.1.2 None
ERR4814573 Other lineage1.1.3.2 None
ERR972801 RR-TB lineage2.2.1.1 None
ERR736850 Sensitive lineage4.9 None
SRR7086718 Other La1.2.BCG None
SRR1173310 Other lineage3.1.1 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR7443756 Sensitive lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR7443730 Sensitive lineage4.9 None
SRR7443776 Sensitive lineage4.9 None
SRR6855957 Sensitive lineage2.2.1 None
SRR11972162 HR-TB lineage4.1.1.1 None
SRR7443743 Sensitive lineage4.9 None
SRR7443731 Sensitive lineage4.9 None
SRR1173833 Other lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SRR12080291 MDR-TB lineage2.2.1 None
SRR7443739 Sensitive lineage4.9 None
SRR7443768 Sensitive lineage4.9 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR7443791 Sensitive lineage4.9 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
ERR4816718 Other lineage4.1.2.1 gb
SRR1013607 HR-TB lineage2.2.2 None
SRR7444071 Sensitive lineage4.9 None
SRR1915482 Other La1.2.BCG None
SRR7443740 Sensitive lineage4.9 None
SRR1013602 HR-TB lineage2.2.1 None
SRR15368751 Sensitive lineage2.2.1 None
SRR1013611 Sensitive lineage4.5 None
SRR1013634 MDR-TB lineage2.2.2 None
ERR2124092 HR-TB lineage1.2.2.2 None
SAMN02599177 Sensitive lineage3 None
ERR4815985 Other lineage5.1.2 None
SRR1013604 HR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR1915486 Other La1.2.BCG None
ERR1140784 Sensitive lineage3 None
SRR1048965 HR-TB lineage2.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1013613 Sensitive lineage2.2.1 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
ERR1140790 Sensitive lineage2.2.1 None
ERR751414 MDR-TB lineage4 None
ERR323057 Sensitive lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
SRR7443753 Sensitive lineage4.9 None
ERR3283015 Sensitive lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
SAMN02599073 Sensitive lineage2.2.1 None
SRR7086717 Other La1.2.BCG None
SRR7535074 Sensitive lineage3 None
SRR7443734 Sensitive lineage4.9 None
SRR7443763 Sensitive lineage4.9 None
SRR1173190 Sensitive lineage4.9 None
ERR4818444 Other lineage4.6.5 None
SRR7535053 Sensitive lineage3 None
SRR1238559 Other lineage4.9 None
ERR751317 Sensitive lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR7535054 Sensitive lineage4.6.1.1 None
ERR1140777 Sensitive lineage4.6.2.2 None
SRR1172706 Sensitive lineage2.2.1 None
SRR6785282 Other lineage4.3.3 None
SRR11972166 Sensitive lineage1.1.3.1 None
ERR4831798 HR-TB lineage2.2.1 vn
SRR11342671 RR-TB lineage4.1.3 None
SRR11972164 HR-TB lineage2.2.1.1 None
ERR473308 HR-TB lineage4.3.4.2.1 None
SRR1048995 HR-TB lineage4.5 None
SRR7443750 Sensitive lineage4.9 None
ERR192070 Sensitive lineage4.9 None
SRR7443724 Sensitive lineage4.9 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
ERR773804 Sensitive lineage4.9 None
SRR1013603 HR-TB lineage2.2.1 None
ERR1140780 Sensitive lineage4.2.1.1 None
SRR7535081 Sensitive lineage4.6.1.1 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR1173768 Sensitive lineage4.9 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR7443754 Sensitive lineage4.9 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR7453031 Sensitive lineage2.2.1.2 None
ERR10796619 Sensitive lineage4.3.3 None
ERR2987807 Sensitive lineage4.2.1.1 None
ERR1140766 Sensitive lineage1.1.2 None
SRR7443736 Sensitive lineage4.9 None
SRR1173380 Pre-XDR-TB lineage2.2;lineage3 None
SRR1174291 Other lineage1.1.2 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR10869260 Pre-XDR-TB lineage2.2.2 None
SRR671871 Sensitive lineage2.2.1 cn
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1173800 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR1172874 Sensitive lineage2.2.1 None
SAMN02599072 Sensitive lineage2.2.1 None
SRR1172322 Sensitive lineage1.1.2 None
ERR1140795 Sensitive lineage6.2.1 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR1173764 Sensitive lineage4.9 None
ERR4188218 Sensitive lineage4.9 None
ERR4815278 Other lineage4.8 None
ERR751332 Sensitive lineage6.2.1 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR7443727 Sensitive lineage4.9 None
ERR4816429 Other lineage1.1.2 None
SRR1175165 Sensitive lineage2.2.1 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR7131053 Other lineage2.2.1 None
ERR1140782 Sensitive lineage2.1 None
SRR1183239 Other lineage4.9 None
SRR7443747 Sensitive lineage4.9 None
ERR1140792 HR-TB lineage5.1 None
SRR1915484 Other La1.2.BCG None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR10614047 Sensitive lineage4.9 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR7443737 Sensitive lineage4.9 None
ERR1140789 Sensitive lineage1.1.1.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02599071 Sensitive lineage3 None
ERR1140793 Sensitive lineage5.1.1 None
SAMN02598978 Other lineage1.1.2 None
ERR405216 Sensitive lineage3.1.1 None
ERR1140799 Sensitive lineage4.2.1.1 None
ERR972802 RR-TB lineage4.1.1.3 None
SAMN02599075 Sensitive lineage1.1.2 None
ERR736825 Sensitive lineage4.9 None
SRR1172798 Sensitive lineage2.2.1 None
SAMN02599068 Sensitive lineage1.2.2.2 None
SRR7443732 Sensitive lineage4.9 None
SRR1173766 Sensitive lineage4.9 None
ERR1140768 Sensitive lineage4.3.3 None
SRR1183601 Other lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SAMN02599090 MDR-TB lineage3 None
SRR1175025 Sensitive lineage2.2.1 None
SRR1173727 MDR-TB lineage3 None
SRR7443794 Sensitive lineage4.9 None
ERR10796630 Other lineage6.2.3 None
ERR1140778 Sensitive lineage5.1.4 None
SRR7443741 Sensitive lineage4.9 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
SRR7086713 Other La1.2.BCG None
ERR1140791 Sensitive lineage1.2.1.2 None
SRR7443762 Sensitive lineage4.9 None
SRR7443725 Sensitive lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR11972160 MDR-TB lineage2.2.1 None
ERR2124088 Other lineage4.4.1.1 None
SRR7453034 Sensitive lineage2.2.1.2 None
ERR970457 RR-TB lineage4.1.1.3 None
SRR7443767 Sensitive lineage4.9 None
SRR1048994 HR-TB lineage4.9 None
SRR3105762 Sensitive lineage4.1 None
SRR7535082 Other lineage4.9 None
SRR1181542 Other lineage4.9 None
ERR473279 Other lineage4.9 None
SRR1180174 Other lineage4.9 None
SRR13591377 Sensitive lineage4.1.1.3 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR7086716 Other La1.2.BCG None
SAMN02599067 Sensitive lineage2.2.1 None
SRR7131114 Other lineage4.1.2 None
SRR1172832 Sensitive lineage2.2.1 None
SRR1048996 Sensitive lineage4.5 None
SRR1180764 Sensitive lineage4.9 None
SRR7131160 Sensitive lineage3 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
SRR1013609 Sensitive lineage4 None
ERR1140796 Sensitive lineage4.6.2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SAMN02599052 Sensitive lineage2.2.1 None
ERR176781 Sensitive lineage1.1.3.2 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR7443723 Sensitive lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR1175151 MDR-TB lineage3 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR1140781 Sensitive lineage3.1 None
ERR3283049 Sensitive lineage4.9 None
SRR1049040 HR-TB lineage2 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR7443742 Sensitive lineage4.9 None
ERR4815777 Other lineage4.9 None
SRR6046152 Other lineage4.9 None
SRR11972171 RR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1173139 Sensitive lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
ERR1140772 Sensitive lineage1.2.1.2 None
ERR1140783 Sensitive lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
ERR164004 Sensitive lineage4.9 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1173269 Sensitive lineage4.9 None
SRR1013608 Sensitive lineage2.2.2 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
ERR2446413 Sensitive lineage4.6.3 None
SAMN02599130 MDR-TB lineage3 None
ERR1193644 HR-TB lineage4.3.3 None
SRR7646056 Other lineage4.2.1.1 None
SRR7443726 Sensitive lineage4.9 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SAMN02599017 Sensitive lineage2.2.1 None