EBG00000313325 - n.844C>T
Drug resistance types
75 Sensitive
11 RR-TB
15 HR-TB
31 MDR-TB
15 Pre-XDR-TB
2 XDR-TB
163 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 4 |
| lineage4.3.3 | 13 |
| lineage1.1 | 1 |
| La1.6 | 2 |
| lineage4.6.3 | 1 |
| lineage2.2.1 | 50 |
| 4 | |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.8 | 18 |
| La1.2 | 6 |
| lineage4.2.1 | 3 |
| lineage3 | 17 |
| La1.4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1 | 23 |
| La1.8.1 | 15 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.5 | 4 |
| lineage4.1.1.3 | 6 |
| La1.7.1 | 1 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2.1 | 14 |
| lineage4.1.1 | 9 |
| lineage4.9 | 26 |
| lineage4.4.1.1 | 7 |
| lineage1.1.3.2 | 4 |
| lineage4.3.4.2.1 | 6 |
| lineage6.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.4 | 1 |
| lineage3.1.3 | 3 |
| lineage4.8.1 | 1 |
| lineage4 | 5 |
| lineage4.6.2.2 | 2 |
| lineage4.2 | 1 |
| lineage4.6.1 | 1 |
| lineage1.2.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.3.4.2 | 4 |
| lineage4.3.4.1 | 4 |
| lineage4.7 | 3 |
| La3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.1 | 2 |
| lineage4.4 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| La1.3 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.2 | 4 |
| lineage6 | 2 |
| lineage6.3.1 | 2 |
| lineage4.9;La1.8 | 1 |
| lineage6.3.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.6 | 1 |
| lineage4.4.1.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 312 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10851620 | Other | lineage4.1.2 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR10993936 | Other | La1.6 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199455 | Other | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10993956 | Other | La1.6 | None | SRR14802219 | Other | lineage4.8 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR17832798 | Other | lineage3 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792267 | Other | La1.8.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1792359 | Other | La1.8.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18213675 | Other | lineage4.8 | None | SRR18149443 | Sensitive | lineage3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213780 | Other | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR18912998 | Sensitive | lineage3 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR19304109 | Other | lineage4.8 | None | SRR19576436 | Sensitive | None | SRR20969923 | Other | lineage2.2.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21764250 | Other | lineage4.9 | None | SRR22048373 | Sensitive | lineage4.1.2.1 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR22048536 | Other | lineage4.3.3 | None | SRR21031736 | Sensitive | lineage2.2.1 | None | SRR8692842 | Other | lineage4.9 | None | ERR4815104 | Other | lineage4.8 | None | ERR4814512 | Other | lineage2.2.1 | None | SRR5485590 | MDR-TB | None | ERR4814643 | Other | lineage4.1.2.1 | None | ERR4815704 | Other | lineage4.1.2.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815075 | MDR-TB | lineage3 | None | SRR6824519 | MDR-TB | lineage2.2.1 | cn | ERR4815528 | Other | lineage4.8 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4814714 | Other | lineage3 | None | SRR3675234 | Other | None | ERR4815903 | Other | lineage4.1.2.1 | None | ERR4817618 | Other | lineage4.8.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816231 | Other | lineage4 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816293 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816703 | Sensitive | lineage4.5 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816869 | Other | lineage4.3.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR5067459 | HR-TB | lineage4.2 | None | ERR4817551 | Other | lineage4.9 | None | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR4820242 | Other | lineage1.2.2.1 | None | ERR2513738 | Other | lineage1.1.3.1 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513929 | Other | lineage4.1.1.2 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819593 | Other | lineage4.5 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR2514394 | Other | lineage4.3.4.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR2101627 | Other | lineage4.1.2.1 | None | ERR2514857 | Other | lineage2.2.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514753 | Other | lineage3 | None | ERR4819921 | Other | lineage4.7 | None | ERR2515007 | Other | lineage3 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR4821109 | Other | lineage4.1.2.1 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4820130 | Other | lineage3 | None | ERR4820192 | Other | La3 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR278516 | MDR-TB | lineage4.6.1.2 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821906 | Other | lineage4.1.1 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044774 | Other | lineage3 | None | SRR5818670 | Other | lineage4.1.2.1 | None | SRR6045992 | Other | lineage3 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045175 | Other | lineage3.1.2.2 | None | SRR6045135 | Other | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR3148213 | Pre-XDR-TB | lineage4.3.4.1 | mx | SRR6046208 | Other | lineage4 | None | SRR6046197 | Other | lineage4.3.3 | None | SRR6045222 | Other | lineage4.1.2.1 | None | ERR4828559 | Other | lineage1.1.1.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR4829359 | Other | lineage4.7 | None | SRR6046541 | Other | lineage4.9 | None | ERR3077968 | MDR-TB | lineage4.1.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR4872272 | Pre-XDR-TB | lineage4.2.1 | None | ERR3077969 | Other | La1.3 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4863405 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6896577 | Sensitive | lineage4.8 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6824324 | Other | lineage4.5 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6855768 | Other | lineage4.3.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR5311080 | Other | La1.8.1 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131201 | Other | lineage4.8 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR8600099 | Other | La1.8.1 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | ERR3261389 | Other | lineage4.9 | None | SRR8600222 | Other | La1.8.1 | None | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR3261359 | Other | lineage4.9 | None | SRR8600217 | Other | La1.8.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971147 | RR-TB | lineage2.2.1 | None | SRR9971209 | RR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3261351 | Other | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR3804166 | Other | lineage4.3.2 | None | ERR3468585 | Other | La1.8.1 | None | ERR3804115 | Sensitive | lineage6 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4407450 | Other | lineage4.3.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188253 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR2516042 | Other | lineage4.1.1.3 | za | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR4772230 | Other | La1.2 | None | ERR2515818 | Other | lineage4.3.2.1 | za | ERR5336160 | Other | lineage6.3.2 | None | ERR6197036 | Other | lineage4 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6338273 | Other | La1.2 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR6338358 | Other | La1.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR6866714 | Sensitive | lineage2.2.1 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | ERR6866872 | Other | lineage4.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | ERR9117728 | Other | lineage3 | None | ERR9117690 | Other | lineage4.8 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9786452 | Other | lineage4.3.2 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | ERR9787173 | Sensitive | lineage6 | None | SRR10315610 | RR-TB | lineage4.2.2.2 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR10482944 | Other | La1.8.1 | None | SRR10808496 | Sensitive | lineage4.3.2 | None |
|---|
