EBG00000313325 - n.844C>T


Drug resistance types
75 Sensitive 11 RR-TB 15 HR-TB 31 MDR-TB 15 Pre-XDR-TB 2 XDR-TB 163 Other
lineage Counts
lineage Count
lineage4.6.2.2 2
lineage4.1.2.1 23
lineage4.5 4
lineage2.2.1 50
lineage4.3.3 13
lineage4.8.1 1
lineage4.9 26
lineage4.2 1
lineage4.1.2 4
lineage1.2.2.1 2
lineage1.1.3.1 1
lineage4.1.1.2 2
lineage4.6.1 1
lineage4.3.2.1 14
lineage4.3.4.2.1 6
lineage4.3.4.2 4
lineage4.7 3
lineage4.3.4.1 4
lineage3 17
La3 1
lineage1.1.3.2 4
lineage4.1.1 9
lineage4.6.1.2 1
lineage3.1.3 3
lineage2.1 2
lineage4.8 18
lineage4.4 2
lineage3.1.2.2 1
lineage4 5
lineage4.4.1.1 7
lineage1.1.1.1 1
lineage4.2.1 3
La1.3 1
lineage4.1.2.1;lineage2.2.1 1
lineage2.2.1.1 5
lineage4.1.1.3 6
lineage4;lineage2.2.1 1
lineage3.1.1 2
lineage4.1.2;lineage3.1 2
lineage2.2 1
lineage4.3 1
La1.8.1 15
La1.2 6
lineage4.1.4 1
lineage6 2
lineage6.3.1 2
lineage4.3.2 4
lineage4.9;La1.8 1
lineage6.3.2 1
lineage4.2.2.2 2
lineage4.6 1
lineage4.4.1.1.1 2
lineage2.2.2 1
La1.6 2
lineage4.6.3 1
4
lineage1.1 1
La1.4 1
lineage1.1.2 2
lineage2.2.2;lineage2.2.1 1
lineage4.4.2 2
La1.7.1 1
lineage1.2.1.2 1
lineage6.1.1 1
lineage1.2.1.2.1 1
lineage4.6.4 1
spoligotype Counts
spoligotype Count
None 312
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816703 Sensitive lineage4.5 None
ERR2510804 Other lineage2.2.1 None
ERR4816869 Other lineage4.3.3 None
ERR4817618 Other lineage4.8.1 None
ERR4817551 Other lineage4.9 None
SRR5067459 HR-TB lineage4.2 None
ERR4820369 Other lineage2.2.1 None
ERR4820711 HR-TB lineage4.1.2 None
ERR4820242 Other lineage1.2.2.1 None
ERR2513738 Other lineage1.1.3.1 None
ERR2513929 Other lineage4.1.1.2 None
SRR5153833 Other lineage2.2.1 None
ERR4818634 Other lineage4.6.1 None
ERR2513743 Other lineage4.1.2 None
ERR2514137 Pre-XDR-TB lineage2.2.1 None
ERR2515854 Sensitive lineage2.2.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR2514533 Other lineage4.9 None
ERR4819593 Other lineage4.5 None
ERR2514394 Other lineage4.3.4.2 None
SRR2101627 Other lineage4.1.2.1 None
SRR2101636 Other lineage4.3.2.1 None
ERR4819921 Other lineage4.7 None
ERR2514645 Other lineage4.3.4.1 None
ERR2514753 Other lineage3 None
ERR2515007 Other lineage3 None
ERR2514857 Other lineage2.2.1 None
ERR2660505 Other lineage1.2.2.1 None
ERR2515148 Sensitive lineage4.3.3 None
ERR4820192 Other La3 None
ERR4820130 Other lineage3 None
ERR4821109 Other lineage4.1.2.1 None
SRR6046096 Other lineage4.1.2.1 None
ERR2660524 HR-TB lineage1.1.3.2 None
ERR4821906 Other lineage4.1.1 None
ERR278516 MDR-TB lineage4.6.1.2 None
SRR6045613 Other lineage3.1.3 None
ERR4821572 Other lineage2.1 None
SRR6045614 Other lineage4.8 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6044787 Other lineage4.4 None
SRR5818670 Other lineage4.1.2.1 None
SRR6044774 Other lineage3 None
SRR6045992 Other lineage3 None
SRR6046197 Other lineage4.3.3 None
SRR6045135 Other lineage3 None
SRR6045158 Other lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6045222 Other lineage4.1.2.1 None
SRR6045175 Other lineage3.1.2.2 None
SRR6046208 Other lineage4 None
ERR4829337 Other lineage4.8 None
ERR3148213 Pre-XDR-TB lineage4.3.4.1 mx
SRR6511600 MDR-TB lineage4.3.4.2 None
ERR4829359 Other lineage4.7 None
SRR6046541 Other lineage4.9 None
SRR6046852 MDR-TB lineage3 None
SRR6046860 Other lineage4.4.1.1 None
ERR4828559 Other lineage1.1.1.1 None
ERR3077968 MDR-TB lineage4.1.2.1 None
ERR4872272 Pre-XDR-TB lineage4.2.1 None
ERR3077969 Other La1.3 None
SRR6982090 RR-TB lineage4.4.1.1 None
ERR4863405 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6982105 Sensitive lineage2.2.1.1 None
SRR6982092 Other lineage4.3.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982102 Other lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6982414 Sensitive lineage4.9 None
SRR6896535 Other lineage4.1.1.3 None
SRR6982180 Sensitive lineage4.1.1.2 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982227 Other lineage4.1.1 None
SRR6785282 Other lineage4.3.3 None
SRR6982419 Other lineage4.8 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982195 RR-TB lineage4.4 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6896577 Sensitive lineage4.8 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6832644 Other lineage4.3.3 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6824324 Other lineage4.5 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR6855768 Other lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6855828 Other lineage4.3.2.1 None
SRR6981997 Sensitive lineage4.9 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982035 Sensitive lineage4.9 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982033 Sensitive lineage2.2.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982056 Sensitive lineage4.3.4.2.1 None
SRR6982075 Sensitive lineage3 None
SRR6982484 Sensitive lineage3.1.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR5162118 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR7131004 Other lineage4.6.2.2 None
ERR5162133 Other La1.8.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131195 Other lineage2.2.1 None
SRR7131201 Other lineage4.8 None
SRR7131198 Other lineage4.3.3 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR9971351 RR-TB lineage2.2.1 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR9971147 RR-TB lineage2.2.1 None
SRR8600099 Other La1.8.1 None
SRR8600217 Other La1.8.1 None
SRR8600222 Other La1.8.1 None
SRR9971017 HR-TB lineage2.2.1 None
SRR9971101 XDR-TB lineage4.1.2.1 None
SRR9971209 RR-TB lineage2.2.1 None
ERR1063855 Other lineage4 None
SRR9971223 Other lineage2.2.1 None
SRR7851312 Other La1.2 None
ERR3261389 Other lineage4.9 None
ERR3261351 Other lineage4.9 None
ERR3261359 Other lineage4.9 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324354 Sensitive lineage4.8 None
ERR3324355 HR-TB lineage4.1.1.3 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR4188010 Other La1.8.1 None
ERR3468585 Other La1.8.1 None
ERR3804115 Sensitive lineage6 None
ERR3804142 Sensitive lineage6.3.1 None
ERR3804166 Other lineage4.3.2 None
ERR4188253 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4627379 Other La1.8.1 None
ERR4407450 Other lineage4.3.2 None
ERR4769505 Other lineage4.9 None
ERR4627392 Other La1.8.1 None
ERR4769419 Other lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769503 Other La1.2 None
ERR4769525 Sensitive lineage4.9 None
ERR4769548 Other lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR2516042 Other lineage4.1.1.3 za
ERR4772230 Other La1.2 None
ERR2515818 Other lineage4.3.2.1 za
ERR5336160 Other lineage6.3.2 None
ERR5864322 MDR-TB lineage4.2.1 None
ERR6197024 RR-TB lineage4.9 None
ERR5865118 MDR-TB lineage2.2.1 None
ERR5987345 Pre-XDR-TB lineage2.2.1 None
ERR6197030 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6338358 Other La1.2 None
ERR6197036 Other lineage4 None
ERR6338273 Other La1.2 None
SRR11662417 Pre-XDR-TB lineage2.1 None
ERR6866186 Sensitive lineage4.8 None
ERR6866714 Sensitive lineage2.2.1 None
ERR6866872 Other lineage4.1.1 None
ERR8025347 Sensitive lineage4.9 None
ERR7821182 Other lineage1.1.3.2 None
ERR7801321 Sensitive lineage4.3.4.2.1 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117725 Other lineage4.1.1 None
ERR9117690 Other lineage4.8 None
ERR9117704 Other lineage4.6 None
ERR9117728 Other lineage3 None
ERR9787173 Sensitive lineage6 None
ERR9117826 Other lineage3.1.3 None
ERR9786452 Other lineage4.3.2 None
ERR9786543 Sensitive lineage4.1.2.1 None
ERR9787167 Sensitive lineage6.3.1 None
SRR10315476 MDR-TB lineage4.8 None
SRR10315462 RR-TB lineage4.3.2.1 None
SRR10315610 RR-TB lineage4.2.2.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
SRR10808496 Sensitive lineage4.3.2 None
SRR10482944 Other La1.8.1 None
SRR10851620 Other lineage4.1.2 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
SRR10851730 Other lineage4.3.3 None
SRR10869268 Pre-XDR-TB lineage2.2.1.1 None
SRR11349151 MDR-TB lineage2.2.1 None
SRR10993956 Other La1.6 None
SRR10993936 Other La1.6 None
SRR11342679 Other lineage4.6.3 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR13423641 MDR-TB lineage2.2.1 None
SRR13199734 Other La1.2 None
SRR12199455 Other None
SRR12199472 Sensitive lineage1.1 None
SRR15316084 Other lineage2.2.1 None
SRR14782113 Pre-XDR-TB lineage4.2.1 None
SRR14802219 Other lineage4.8 None
SRR15368914 MDR-TB lineage2.2.1 None
SRR15316102 Other lineage2.2.1.1 None
SRR16627757 Sensitive lineage3 None
SRR15723110 Sensitive lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR1735591 Other lineage4.1.2.1 None
SRR17406743 HR-TB lineage1.1.2 None
SRR17856664 Sensitive lineage3 None
SRR17832798 Other lineage3 None
SRR1791899 HR-TB La1.8.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR1792267 Other La1.8.1 None
SRR1792359 Other La1.8.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18149443 Sensitive lineage3 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18213675 Other lineage4.8 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR18213721 Other lineage4.8 None
SRR18391772 Other La1.7.1 None
SRR18213780 Other lineage4.1.1.3 None
SRR18911000 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR19304035 Other lineage4.1.2.1 None
SRR19304109 Other lineage4.8 None
SRR18912998 Sensitive lineage3 None
SRR19303907 Other lineage4.8 None
SRR19576436 Sensitive None
SRR20969951 Other lineage4.4.2 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969923 Other lineage2.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR21001883 XDR-TB lineage2.2.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101647 Sensitive lineage4.9 None
SRR2101666 Sensitive lineage4.8 None
SRR2101816 Other lineage4.8 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR21239878 HR-TB lineage4.4.1.1 None
SRR21240202 HR-TB lineage4.4.1.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21714038 Sensitive lineage4.3.3 None
SRR21658552 Other lineage6.1.1 None
SRR21676318 Sensitive lineage2.2.1 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR21031736 Sensitive lineage2.2.1 None
SRR21798279 MDR-TB lineage2.2.1 None
SRR22048373 Sensitive lineage4.1.2.1 None
SRR21764250 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
ERR4815104 Other lineage4.8 None
SRR8692842 Other lineage4.9 None
SRR6045261 Other lineage1.1.2 gb
ERR4815704 Other lineage4.1.2.1 None
ERR4814512 Other lineage2.2.1 None
ERR1665403 MDR-TB lineage2.2.1 None
ERR4814643 Other lineage4.1.2.1 None
SRR5485590 MDR-TB None
ERR1679641 Other lineage4.6.4 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR4815075 MDR-TB lineage3 None
SRR6824519 MDR-TB lineage2.2.1 cn
ERR4814714 Other lineage3 None
SRR3675234 Other None
ERR4815528 Other lineage4.8 None
ERR4815577 Other lineage3.1.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816231 Other lineage4 None
ERR4816243 Sensitive lineage3 None
ERR4816293 Other lineage4.1.2.1 None
ERR4815903 Other lineage4.1.2.1 None
ERR4816184 Other lineage4.1.2.1 None