EBG00000313325 - n.1108_1109insA
Drug resistance types
108 Sensitive
5 RR-TB
14 HR-TB
10 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 5 |
| lineage4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| 6 | |
| lineage4.4.1.1 | 9 |
| lineage2.2.1 | 22 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 15 |
| lineage4.3.2.1 | 10 |
| lineage4.1.2.1 | 5 |
| lineage4.9 | 13 |
| lineage4.8 | 9 |
| lineage4.3.3 | 8 |
| lineage1.1.3.2 | 3 |
| lineage4.4 | 1 |
| lineage4.1.1 | 7 |
| lineage4.4.1.1.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage3.1.1 | 4 |
| lineage4.7 | 2 |
| lineage4.1.2 | 7 |
| lineage4.4.2 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.3 | 1 |
| lineage3 | 2 |
| lineage4.9;La1.8.1 | 1 |
| La1.8.1 | 12 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.4 | 1 |
| La1.3 | 3 |
| lineage4.1.1.3 | 2 |
| La1.2 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.2 | 1 |
| La1.6 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.4 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 182 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831711 | HR-TB | lineage2.2.1.1 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6982078 | Sensitive | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982405 | Sensitive | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5087675 | Other | La1.8.1 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR036191 | Sensitive | lineage4.9.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3445503 | HR-TB | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3439443 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR4188160 | Other | La1.8.1 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769471 | Other | La1.3 | None | ERR4772230 | Other | La1.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769561 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR6362473 | MDR-TB | lineage2.2.2 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | SRR10482948 | Other | La1.8.1 | None | ERR8975455 | Sensitive | lineage4.8 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR13199734 | Other | La1.2 | None | SRR10993956 | Other | La1.6 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR19576436 | Sensitive | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | ERR161022 | Sensitive | lineage4.3.4.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21764250 | Other | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR4819125 | Other | lineage2.2.1 | gb | ERR2515364 | Sensitive | lineage4.1.2 | za | ERR2515460 | Sensitive | lineage4.8 | za | ERR2515484 | Other | lineage4.8 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212162 | Sensitive | lineage4.3.4.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SRR5341430 | Other | lineage3 | None | ERR2693240 | Other | La1.8.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None |
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