EBG00000313325 - n.1235C>A


Drug resistance types
92 Sensitive 10 RR-TB 10 HR-TB 21 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
lineage2.2.2 1
lineage4;lineage2.2.1 1
lineage2.2.1 31
lineage4.3.4.2.1 6
lineage4.4.1.1.1 2
lineage4.4.1.1 4
lineage4.7 1
lineage4.3.2.1 6
lineage4.8 15
lineage4.1.2 3
lineage4.1.1 4
lineage4.9 40
lineage4.3.3 11
6
lineage4.3.4.1 3
lineage5.1.1 2
lineage4.3.4.2 1
lineage4.6.2.2 3
lineage4.1.4 1
lineage4.1.2.1 5
lineage4.1.1.3 8
lineage1.1.3.2 2
lineage6.3.1 2
La1.3 1
lineage2.2.1.1 5
lineage4.2.1 2
lineage4.6.1.1 1
La1.2 1
lineage3.1.1 2
lineage4.2.2.2 3
La1.6 3
lineage1.2.2.1 3
La1.8.1 3
lineage4.6.1 3
lineage1.2.1.2.1 1
lineage4.9;lineage4.3.4.1 1
lineage1.1 1
lineage4.9.1 1
lineage3 2
lineage1.1.3 1
lineage1.2.2.2 1
lineage4 4
lineage4.6.4 1
lineage4.2.2 1
lineage1.1.1.1 1
lineage4.1.1.2 1
lineage2.2 1
lineage1 1
spoligotype Counts
spoligotype Count
None 203
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6982494 Other lineage2.2.2 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982362 Other lineage4.3.2.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6981966 Other lineage2.2.1 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
SRR6855917 Other lineage4.8 None
SRR6982014 Other lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6981981 Other lineage4.3.3 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6982405 Sensitive None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982064 Sensitive lineage4.1.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982058 HR-TB lineage2.2.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR7645834 Other lineage2.2.1 None
SRR6982558 Other lineage4.3.4.2 None
ERR1144989 Sensitive lineage4.8 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324354 Sensitive lineage4.8 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324355 HR-TB lineage4.1.1.3 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR3804142 Sensitive lineage6.3.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR473298 Sensitive lineage4.6.2.2 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR4769525 Sensitive lineage4.9 None
ERR4769505 Other lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
SRR1011489 Sensitive lineage2.2.1.1 None
ERR5866473 MDR-TB lineage4.2.1 None
ERR751569 MDR-TB lineage4.3.3 None
ERR9117681 Other lineage4.3.3 None
ERR9787167 Sensitive lineage6.3.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR2515460 Sensitive lineage4.8 za
ERR2515916 Sensitive lineage4.3.4.2.1 za
ERR5864323 MDR-TB lineage4.2.1 None
ERR5865119 MDR-TB lineage2.2.1 None
ERR5865343 MDR-TB lineage2.2.1 None
ERR6201802 Other La1.2 None
ERR1034765 HR-TB lineage4.3.3 None
ERR181864 Sensitive lineage3.1.1 None
SRR1049568 Sensitive lineage4.2.2.2 None
SRR1019130 Sensitive lineage4.3.2.1 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1049569 Sensitive lineage4.2.2.2 None
SRR1049031 HR-TB lineage4.9 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR10993936 Other La1.6 None
SRR1062863 Sensitive lineage1.2.2.1 None
SRR10993953 Other La1.6 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR10993956 Other La1.6 None
SRR11294512 Other La1.8.1 None
SRR1169167 Pre-XDR-TB lineage4.1.1.3 None
SRR1173025 Other lineage4.9 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR1172808 Other lineage4.9 None
SRR1172306 Pre-XDR-TB lineage4.1.1.3 None
SRR1173717 MDR-TB lineage4.6.1 None
SRR1173416 Other lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SRR1173190 Sensitive lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR1173421 RR-TB lineage4.9 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR1173720 Other lineage4.9 None
SRR1173766 Sensitive lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1180982 Other lineage2.2.1 None
SRR1196582 Other lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR13591410 Other lineage4.9;lineage4.3.4.1 None
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
SRR12882768 RR-TB lineage3.1.1 None
SRR11972311 Pre-XDR-TB None
SRR11972420 MDR-TB lineage2.2.1 None
SRR12199472 Sensitive lineage1.1 None
SRR13861519 Other lineage4.9 None
SRR13861589 RR-TB lineage4.9 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR13861720 Other lineage4.9 None
SRR18911000 Sensitive lineage2.2.1 None
SRR1791899 HR-TB La1.8.1 None
SRR2101643 Other lineage2.2.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR2101685 Sensitive lineage4.9 None
SRR2101691 Other lineage2.2.1 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101730 Sensitive lineage4.1.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR2101816 Other lineage4.8 None
SRR21676318 Sensitive lineage2.2.1 None
SRR21764246 Other lineage4.9 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21728339 Other lineage3 None
SRR21711124 Other lineage1.1.3 None
SRR21714038 Sensitive lineage4.3.3 None
SRR3105736 Other lineage1.2.2.2 None
ERR176771 Sensitive None
SRR22424905 RR-TB lineage4.9 None
ERR2179857 RR-TB lineage4 None
ERR1815548 Other La1.8.1 None
SAMN02567676 MDR-TB lineage4.6.1 None
ERR1679641 Other lineage4.6.4 None
ERR212047 Sensitive lineage4.8 mw
SAMN02380985 Sensitive lineage4.2.2.2 None
ERR2229033 Other lineage4.8 None
ERR2516375 MDR-TB lineage4.3.3 None
ERR027451 Pre-XDR-TB lineage2.2.1 ru
ERR2229358 Other lineage4.8 None
ERR2179816 Sensitive lineage4 None
ERR2228859 RR-TB lineage4 None
ERR2228888 Other lineage4.8 None
SAMN02350447 Sensitive lineage2.2.1.1 None
ERR2515484 Other lineage4.8 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5341375 Other lineage4.9 None
SRR5341417 Pre-XDR-TB lineage3 None
SAMN02350450 Sensitive lineage1.2.2.1 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR2101662 Sensitive lineage4.3.3 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
ERR2516270 Pre-XDR-TB lineage2.2.1 None
ERR702399 Sensitive lineage5.1.1 gh
ERR2851371 Other lineage4.9 None
ERR4822221 Sensitive lineage4.2.2 None
ERR2660524 HR-TB lineage1.1.3.2 None
SRR6485054 Sensitive lineage4.8 None
SRR6397406 Other lineage4.1.2.1 None
SRR6397441 Other lineage4 None
SRR6152986 Other lineage2.2.1 None
SRR6397642 RR-TB None
SRR6397771 Other lineage1.1.1.1 None
ERR502472 Other lineage4.6.2.2 None
SRR6982078 Sensitive None
ERR502483 Sensitive lineage4.9 None
ERR502482 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
SRR6982088 Other lineage4.1.1.2 None
ERR502486 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6856094 Other lineage2.2.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982174 Sensitive lineage4.3.3 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6982419 Other lineage4.8 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982140 Other lineage2.2 None
SRR6982139 Sensitive lineage4.9 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982194 Other lineage2.2.1 None
SRR6982196 Sensitive None
SRR6982198 HR-TB lineage1 None
SRR6982205 Sensitive lineage1.2.2.1 None