EBG00000313325 - n.1235C>A
Drug resistance types
94 Sensitive
10 RR-TB
11 HR-TB
21 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 32 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 5 |
| lineage4.1.4 | 1 |
| lineage4.1.1.3 | 8 |
| lineage4.8 | 15 |
| lineage1.1.3.2 | 2 |
| lineage6.3.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.9 | 40 |
| La1.3 | 1 |
| lineage4.3.3 | 11 |
| La1.2 | 1 |
| lineage5.1.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 6 |
| lineage4.2.2.2 | 3 |
| La1.6 | 3 |
| lineage1.2.2.1 | 3 |
| La1.8.1 | 3 |
| lineage4.6.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| 6 | |
| lineage1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.1.1 | 4 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1 | 4 |
| lineage3 | 2 |
| lineage1.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.6.4 | 1 |
| lineage4 | 4 |
| lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1 | 1 |
| lineage4.7 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 206 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR6201802 | Other | La1.2 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR5866473 | MDR-TB | lineage4.2.1 | None | ERR751569 | MDR-TB | lineage4.3.3 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR10993953 | Other | La1.6 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR10993936 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR10993956 | Other | La1.6 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1169167 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1169203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172808 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1173720 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972311 | Pre-XDR-TB | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR13861519 | Other | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101662 | Sensitive | lineage4.3.3 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21764246 | Other | lineage4.9 | None | SRR21728339 | Other | lineage3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | ERR176771 | Sensitive | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR1815548 | Other | La1.8.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SAMN02567676 | MDR-TB | lineage4.6.1 | None | ERR181864 | Sensitive | lineage3.1.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2179857 | RR-TB | lineage4 | None | ERR2516375 | MDR-TB | lineage4.3.3 | None | ERR212047 | Sensitive | lineage4.8 | mw | ERR2229033 | Other | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | ERR2179816 | Sensitive | lineage4 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228888 | Other | lineage4.8 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR5341375 | Other | lineage4.9 | None | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR2515364 | Sensitive | lineage4.1.2 | za | ERR2515460 | Sensitive | lineage4.8 | za | ERR2515484 | Other | lineage4.8 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR2516270 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822221 | Sensitive | lineage4.2.2 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR6397406 | Other | lineage4.1.2.1 | None | ERR2851371 | Other | lineage4.9 | None | SRR6397441 | Other | lineage4 | None | SRR6485054 | Sensitive | lineage4.8 | None | SRR6982078 | Sensitive | None | SRR6397642 | RR-TB | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982174 | Sensitive | lineage4.3.3 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR502513 | Sensitive | lineage5.1.4 | gh | SRR6982064 | Sensitive | lineage4.1.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1144989 | Sensitive | lineage4.8 | None |
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