EBG00000313339 - n.2813C>T


Drug resistance types
181 Sensitive 8 RR-TB 61 HR-TB 61 MDR-TB 33 Pre-XDR-TB 2 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.6.1.1 19
lineage4.9 37
lineage1.2.1.2.1 6
lineage2.2.1 64
lineage4.5 6
lineage4.1.1.1 6
lineage4.4.1.1 13
lineage4.3.2 4
lineage1.1.2 24
lineage4.3.4.2 3
lineage4.3.3 10
lineage4.4.2 5
lineage2.2.2 24
lineage4.8 8
lineage1.2.2.1 1
lineage3 14
lineage6.1.1 2
lineage4.3.4.2.1 19
lineage3.1.1 4
lineage4.6.1.2 6
lineage5.1.2 1
lineage6.3.1 1
lineage5.1.1 6
lineage6.2.1 1
lineage2.2.1.1 5
lineage4.8.1 3
lineage4.4.1.1.1 1
lineage1.2.2.2 6
lineage2.2.1;lineage2.2.2 5
lineage6.1.3 1
lineage2.2.1;lineage4 5
lineage4.1.2.1 13
lineage4 2
lineage4.1 2
lineage3.1.1;lineage4.6.1.1 2
lineage4.3.4.1 2
lineage4.1.2.1;lineage4.9 1
lineage3.1;lineage4.6.1.1 1
lineage2.2.2;lineage4 9
lineage4.3.2.1;lineage4.9 1
lineage2.2;lineage4 1
La1.7;lineage4.9 1
lineage4.6 1
La1.8.1 4
lineage4.1.2 2
lineage4.3.2;lineage4.9 1
lineage4.9.1 4
lineage4.6.5 1
lineage4.3.4.1;lineage4.9 1
lineage4.4 1
lineage2.2;lineage4.9 1
lineage2.2;lineage4.2.2;lineage4.4 1
lineage4.3.2.1 2
lineage2;lineage4.9 2
lineage2.1;lineage4.9 1
lineage1.1.1.1 1
lineage4.6.2.2 1
lineage2.2.1.1;lineage4 1
M.canetti;lineage2.1 1
lineage4.4.1.2 1
lineage4.2.1 1
lineage4.6.4 1
lineage1.2.2.1;lineage4 1
lineage2 1
La1.6 1
lineage1.1.3.3 1
lineage2.2.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 379
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140627 Sensitive lineage4.6.1.1 None
ERR405191 Sensitive lineage4.9 None
SRR1140677 MDR-TB lineage4.6.1.1 None
SRR16156291 Sensitive lineage4.9 None
DRR188753 Sensitive lineage1.2.1.2.1 None
SRR11662284 MDR-TB lineage2.2.1 None
SRR1013612 Sensitive lineage4.5 None
SRR1172177 HR-TB lineage4.1.1.1 None
SRR1169145 MDR-TB lineage4.1.1.1 None
ERR3797084 Sensitive lineage4.9 None
SRR1169150 MDR-TB lineage4.4.1.1 None
ERR4178291 Sensitive lineage4.3.2 None
ERR751317 Sensitive lineage4.9 None
SRR1169576 Sensitive lineage1.1.2 None
ERR987734 HR-TB lineage4.3.4.2 None
ERR126603 Sensitive lineage4.3.3 None
ERR176619 Sensitive lineage4.9 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR1048995 HR-TB lineage4.5 None
ERR212015 Sensitive lineage4.8 None
ERR212084 Sensitive lineage1.2.2.1 None
ERR192070 Sensitive lineage4.9 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR7131160 Sensitive lineage3 None
ERR3799543 Sensitive lineage6.1.1 None
ERR400443 Sensitive lineage1.2.1.2.1 None
ERR405186 Sensitive lineage4.3.4.2.1 None
ERR4799636 Pre-XDR-TB lineage2.2.1 None
ERR405216 Sensitive lineage3.1.1 None
ERR405217 Sensitive lineage2.2.1 None
ERR405218 Sensitive lineage3.1.1 None
ERR405223 Sensitive lineage4.6.1.2 None
ERR4596937 Sensitive lineage1.1.2 None
SRR1140751 MDR-TB lineage4.4.1.1 None
ERR751339 Sensitive lineage5.1.2 None
ERR751331 Sensitive lineage6.3.1 None
ERR751337 Sensitive lineage5.1.1 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR751327 Sensitive lineage5.1.1 None
ERR736818 Sensitive lineage4.3.3 None
ERR751329 Sensitive lineage5.1.1 None
ERR751338 Other lineage5.1.1 None
ERR751336 Sensitive lineage5.1.1 None
ERR751332 Sensitive lineage6.2.1 None
SRR1048982 HR-TB lineage2.2.1.1 None
ERR405202 Sensitive lineage4.3.4.2 None
ERR405192 Sensitive lineage3 None
ERR485006 HR-TB lineage4.9 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SRR1013608 Sensitive lineage2.2.2 None
SRR1141261 Sensitive lineage4.9 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
SAMN02599075 Sensitive lineage1.1.2 None
SAMN02598976 Sensitive lineage1.2.2.2 None
SAMN02599090 MDR-TB lineage3 None
SAMN02598961 Sensitive lineage1.1.2 None
SAMN02598978 Other lineage1.1.2 None
SAMN02598974 Sensitive lineage1.1.2 None
SAMN02599170 Sensitive lineage1.1.2 None
SAMN02598977 Other lineage1.1.2 None
ERR323061 Sensitive lineage4.9 None
SRR12420692 MDR-TB lineage2.2.1 None
ERR5987249 MDR-TB lineage4.3.2 None
ERR773795 Sensitive lineage4.3.4.2 None
SRR7070274 Sensitive lineage1.2.1.2.1 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
ERR1334032 Other lineage6.1.3 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR15368751 Sensitive lineage2.2.1 None
SRR15368784 Sensitive lineage2.2.1.1 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013595 Sensitive lineage3 None
SRR19304064 MDR-TB lineage2.2.1 None
SRR19303931 Other lineage2.2.1 None
SRR18003011 Other lineage2.2.1 None
SRR18003000 Sensitive lineage2.2.1 None
SRR19303788 Sensitive lineage4.8 None
SRR19303774 Sensitive lineage4.1.2.1 None
SRR18002877 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR18002911 Sensitive lineage2.2.1;lineage4 None
SRR18002888 RR-TB lineage2.2.1 None
SRR18002971 Other lineage2.2.1 None
SRR18003040 MDR-TB lineage2.2.1 None
SRR18003048 XDR-TB lineage2.2.1 None
SRR19303933 Other lineage4.8 None
SRR1013610 Sensitive lineage4 None
SRR19303792 Sensitive lineage4.1.2.1 None
SRR1013531 Sensitive lineage4.9 None
SRR7898215 HR-TB lineage4.1.2.1 None
SRR7535044 Pre-XDR-TB lineage4.6.1.2 None
SRR7535073 Sensitive lineage4.6.1.1 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR7069638 Pre-XDR-TB lineage2.2.1 None
SRR3105762 Sensitive lineage4.1 None
SRR1173799 Sensitive lineage3.1.1;lineage4.6.1.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR14802194 Sensitive lineage4.3.3 None
SRR1062865 Sensitive lineage2.2.2 None
SRR1169568 Sensitive lineage1.1.2 None
SRR7898217 MDR-TB lineage1.1.2 None
SRR7535053 Sensitive lineage3 None
SRR1062898 MDR-TB lineage4.3.4.2.1 None
SRR6280286 Sensitive lineage2.2.1 None
SRR1106670 Sensitive lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
ERR176740 Other lineage4.9 None
SRR1173565 MDR-TB lineage3.1;lineage4.6.1.1 None
SRR5153258 Sensitive lineage4.8 None
SRR1172300 Sensitive lineage1.1.2 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR1062868 Sensitive lineage4.3.2.1;lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR1049023 HR-TB lineage4.9 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2;lineage4 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6046609 Sensitive lineage4.9 None
SRR6785301 Sensitive lineage2.2.1 None
ERR3132197 Sensitive lineage4.1.2.1 None
ERR2184217 Sensitive lineage4.1.2.1 pe
SRR1048965 HR-TB lineage2.2.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR1199087 Sensitive lineage4.6.1.1 None
ERR216953 Sensitive lineage4.3.4.2.1 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1173597 Sensitive lineage1.2.2.2 None
ERR6865895 Sensitive lineage4.3.2 None
SRR1062897 MDR-TB lineage4.4.1.1 None
SRR6044936 Other lineage4.6 None
SRR3742667 Sensitive lineage4.9 None
ERR216949 Sensitive lineage4.3.4.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1173416 Sensitive lineage4.9 None
ERR13248825 Sensitive lineage1.2.1.2.1 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR1172722 Sensitive lineage1.1.2 None
SRR1173566 Other lineage1.1.2 None
ERR5311084 Other La1.8.1 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR6046834 Sensitive lineage4.9 None
ERR5865379 Pre-XDR-TB lineage2.2.1 None
ERR036200 Sensitive lineage4.1.2 None
ERR037513 Sensitive lineage4.3.4.2.1 None
ERR176780 Sensitive lineage4.9 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR176489 Sensitive lineage4.3.4.2.1 None
ERR176565 Sensitive lineage4.3.4.2.1 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1013532 Sensitive lineage4.3.2;lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1048983 HR-TB lineage2.2.1.1 None
ERR181771 Sensitive lineage3.1.1 None
ERR10796623 Other lineage4.1.1.1 None
ERR3283049 Sensitive lineage4.9 None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR1023494 Sensitive lineage3 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR1063888 HR-TB lineage1.1.2 None
SRR1140576 Sensitive lineage4.6.1.1 None
SRR1049743 Sensitive lineage4.6.1.1 None
DRR213597 MDR-TB lineage2.2.2 None
ERR245810 Sensitive lineage4.9.1 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR216910 Sensitive lineage4.3.4.2.1 None
ERR4818444 Other lineage4.6.5 None
ERR736808 Sensitive lineage2.2.1 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR1049724 MDR-TB lineage4.6.1.1 None
SRR1173721 Sensitive lineage1.1.2 None
SRR1062869 Sensitive lineage4.9.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR9786817 Sensitive lineage4.1.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR1013614 Sensitive lineage2.2.1 None
SRR1062933 Sensitive lineage4.9 None
SAMN02403610 MDR-TB lineage4.1.1.1 None
SRR12080291 MDR-TB lineage2.2.1 None
SRR12882374 Sensitive lineage3.1.1 None
SAMN02599068 Sensitive lineage1.2.2.2 None
SRR1172713 MDR-TB lineage4.4 None
SAMN02599179 MDR-TB lineage1.1.2 None
SRR12420668 MDR-TB lineage2.2.1 None
ERR9787099 Sensitive lineage6.1.1 None
SRR1048852 HR-TB lineage2.2;lineage4.9 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
SRR5382721 Other La1.8.1 None
SRR18003018 Sensitive lineage2.2.1 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SRR21240197 Sensitive lineage4.3.3 None
SRR14802191 Sensitive lineage2.2.1 None
SRR6152910 Sensitive lineage1.2.1.2.1 None
SRR21736381 Sensitive lineage4.3.2 None
SRR18002873 Pre-XDR-TB lineage2.2;lineage4.2.2;lineage4.4 None
SRR1167369 MDR-TB lineage4.1.1.1 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR1047993 HR-TB lineage2.2.1 None
SRR6785282 Other lineage4.3.3 None
SRR16156814 Sensitive lineage4.9 None
SRR4033544 Sensitive lineage4.3.2.1 None
SRR4033434 Sensitive lineage4.3.2.1 None
SRR1174291 Other lineage1.1.2 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1144759 HR-TB lineage2.2.2;lineage4 None
ERR3559612 Sensitive lineage2.2.1 None
SRR15315871 Sensitive lineage4.9 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
DRR099689 Sensitive lineage1.1.1.1 None
SRR1062895 Sensitive lineage4.6.1.1 None
SRR1169581 Sensitive lineage1.1.2 None
SRR19303773 Other lineage4.6.2.2 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
ERR867519 Other lineage4.3.3 None
SRR1175096 Sensitive lineage1.2.2.2 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR1048966 MDR-TB lineage2.2.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1172267 Sensitive lineage1.1.2 None
ERR323035 Sensitive lineage4.9 None
ERR6359064 Sensitive lineage4.9 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1172710 Sensitive lineage1.2.2.2 None
SRR1173293 Other lineage3.1.1;lineage4.6.1.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR19303779 Sensitive lineage4.8 None
SRR1049744 Sensitive lineage4.6.1.1 None
SRR12199409 Other lineage1.2.2.2 None
ERR4596906 Sensitive lineage1.1.2 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR1048980 HR-TB lineage3 None
SRR1140736 Other lineage4.1.2.1 None
ERR8773691 HR-TB lineage4.2.1 None
SRR1013609 Sensitive lineage4 None
SRR1013611 Sensitive lineage4.5 None
SRR10214507 Other lineage1.2.1.2.1 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049629 MDR-TB lineage4.4.1.1 None
ERR1213938 Sensitive lineage4.1.2.1 pe
SRR1173686 MDR-TB lineage3 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR7645936 Sensitive lineage2.2.1 None
SRR1013527 Other lineage2.2.1 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1173620 Sensitive lineage1.1.2 None
SRR1049736 Sensitive lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR1048993 HR-TB lineage4.9 None
SRR1165277 MDR-TB lineage4.3.3 None
ERR3283015 Sensitive lineage4.9 None
SRR1048994 HR-TB lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR1049622 MDR-TB lineage4.4.1.1 None
ERR473279 Other lineage4.9 None
SRR1173772 Sensitive lineage1.1.2 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SRR1013528 Pre-XDR-TB lineage2.2.2;lineage4 None
ERR867567 RR-TB lineage3 None
ERR1679639 Other lineage4.6.4 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
ERR212112 Sensitive lineage1.2.2.1;lineage4 None
ERR2179695 Sensitive lineage4.5 None
SRR1165656 MDR-TB lineage4.1.1.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
ERR2517457 Sensitive lineage3 None
SRR7535081 Sensitive lineage4.6.1.1 None
SRR6831994 Sensitive lineage4.1 None
ERR176811 Sensitive lineage4.9.1 None
ERR405194 Sensitive lineage4.1.2.1 None
SRR1049040 HR-TB lineage2 None
SRR1013607 HR-TB lineage2.2.2 None
SRR1013613 Sensitive lineage2.2.1 None
ERR4872269 XDR-TB lineage2.2.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR1049624 MDR-TB lineage4.3.4.2.1 None
SRR1062937 Sensitive lineage4.6.1.1 None
SAMN02360585 HR-TB lineage4.5 None
ERR400350 Sensitive lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360580 HR-TB lineage2.2.1 None
SAMN02360577 HR-TB lineage3 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SAMN02381009 MDR-TB lineage4.4.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR3468578 Sensitive La1.8.1 None
SAMN02381047 Sensitive lineage4.6.1.1 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SAMN02381010 MDR-TB lineage4.3.4.2.1 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR10993944 Other La1.6 None
ERR751330 MDR-TB lineage5.1.1 None
SRR1062867 Sensitive lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
ERR983241 MDR-TB lineage2.2.1 None
SRR19303813 Sensitive lineage4.8 None
SRR8758881 Pre-XDR-TB lineage2.2.1 None
SRR1013530 Other lineage4.9.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR18003051 Other lineage2.2.1 None
SRR18511647 Sensitive lineage2.2.1 None
ERR987766 HR-TB lineage4.3.3 None
SRR2101532 Sensitive lineage4.4.1.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2.1 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SRR6855939 Sensitive lineage2.2.1 None
SRR1062864 Sensitive lineage4.9 None
SRR6982516 Sensitive lineage4.4.1.1 None
SRR1173820 MDR-TB lineage4.1.2 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR7535074 Sensitive lineage3 None
SRR7535080 Sensitive lineage4.8 None
SRR7535054 Sensitive lineage4.6.1.1 None
SRR6480571 MDR-TB lineage2.2.2 None
SRR16157045 Sensitive lineage4.9 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR1049723 MDR-TB lineage4.6.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1049625 MDR-TB lineage4.3.4.2.1 None
SRR10808430 Sensitive lineage4.1.2.1 None
SRR1172347 Sensitive lineage1.1.2 None
ERR4188208 Sensitive La1.8.1 None
SRR1048981 HR-TB lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1049735 Sensitive lineage4.9 None
SRR11972175 Sensitive lineage2.2.1 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SRR1048996 Sensitive lineage4.5 None
SRR1140586 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR405190 Sensitive lineage4.9 None
SAMN02381005 Sensitive lineage4.6.1.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
SRR1140750 MDR-TB lineage4.3.4.2.1 None