Rv0668 - c.3651C>G
Drug resistance types
54 Sensitive
4 RR-TB
48 HR-TB
11 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 49 |
| lineage2.2.1 | 15 |
| lineage4.6.2.2 | 1 |
| 40 | |
| lineage1.1.2 | 3 |
| lineage4.8 | 6 |
| lineage4.9 | 14 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 2 |
| La1 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.2.1 | 1 |
| La1.4 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 168 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR5341469 | Other | lineage4 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | SRR6046617 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR036207 | Other | lineage4.9 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769452 | HR-TB | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR245758 | Other | lineage4.9.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR9634265 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1181161 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR176778 | HR-TB | None | SRR16278274 | Other | La1.4 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR176651 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | ERR181887 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816656 | HR-TB | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818655 | Other | lineage4.3.3 | None | SRR5341453 | Sensitive | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818929 | HR-TB | None | SRR5341375 | Other | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4817569 | Other | lineage4.3.4.1 | None | SRR5341387 | Other | lineage4 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4820397 | Other | lineage4.9 | None |
|---|
