EBG00000313325 - n.1286G>T
Drug resistance types
109 Sensitive
3 RR-TB
7 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 10 |
| lineage4.9 | 105 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1 | 26 |
| La1.8.1 | 14 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 4 |
| lineage4.8 | 9 |
| lineage4.3.3 | 10 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2.1 | 11 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage4.1.1.1 | 3 |
| La1.2.BCG | 4 |
| lineage3 | 4 |
| 1 | |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| La1.7.1 | 2 |
| lineage4.5 | 1 |
| lineage4 | 1 |
| lineage4.6.2.2 | 2 |
| La1.8.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 4 |
| La1.2 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3.1;lineage4.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| La1.8.X-unk6 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1 | 1 |
| La1.6 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR1182882 | Other | lineage4.9 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR1182904 | Sensitive | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR10482944 | Other | La1.8.1 | None | ERR1034722 | Other | lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR1180131 | Sensitive | lineage4.9 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR1181223 | Other | lineage4.9 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR1183175 | Other | lineage4.9 | None | SRR1183327 | Other | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR1183315 | Other | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR6981981 | Sensitive | lineage4.3.3 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR1180623 | Sensitive | lineage4.9 | None | SRR1183050 | Other | lineage4.9 | None | SRR1183394 | Other | lineage4.9 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR1180750 | Other | lineage4.9 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6982484 | Other | lineage3.1.1 | None | SRR1181184 | Sensitive | lineage4.9 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR1181422 | Other | lineage4.9 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR1183681 | Other | lineage4.9 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR1180569 | Sensitive | lineage4.9 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR1183524 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1180669 | Other | lineage4.9 | None | SRR1183707 | Other | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | SRR1182923 | Other | lineage4.9 | None | SRR6981939 | Other | lineage4.3.4.2.1 | None | SRR1183682 | Other | lineage4.9 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1180048 | Other | lineage4.9 | None | ERR5162133 | Sensitive | La1.8.1 | None | ERR2513894 | Sensitive | lineage3 | gb | SRR6982405 | Sensitive | lineage4.4.1.1 | None | SRR6982196 | Sensitive | None | ERR11775914 | MDR-TB | lineage4.2.2.2 | None | SRR6982050 | Other | lineage4.3.4.1 | None | SRR7240324 | Other | La1.8.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR1183435 | Other | lineage4.9 | None | SRR18391683 | Other | La1.7.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1183187 | Sensitive | lineage4.9 | None | SRR1915486 | Other | La1.2.BCG | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101827 | Other | lineage4.3.4.2.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR1180597 | Other | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR2179857 | Sensitive | lineage4 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR2515484 | Sensitive | lineage4.8 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR1183617 | Other | lineage4.9 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR1183122 | Other | lineage4.9 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR1180111 | Other | lineage4.9 | None | SRR1180046 | Other | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR1182900 | Sensitive | lineage4.9 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | ERR4188253 | Other | La1.8.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR13199734 | Other | La1.2 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | SRR1182876 | Other | lineage4.9 | None | SRR6982328 | Other | lineage3.1.1 | None | SRR1183430 | Other | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR1915484 | Other | La1.2.BCG | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR1180094 | Other | lineage4.9 | None | SRR1180495 | Other | lineage4.9 | None | SRR1182885 | Other | lineage4.9 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR1181233 | Other | lineage4.9 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR1180024 | Other | lineage4.9 | None | SRR1180153 | Other | lineage4.9 | None | SRR2101625 | Other | lineage3.1;lineage4.1.2 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR7240537 | Other | La1.8.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR5341417 | HR-TB | lineage3 | None | SRR7240420 | Other | La1.8.X-unk6 | None | ERR5162118 | Other | La1.8.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR1181228 | Sensitive | lineage4.9 | None | SRR1180774 | Other | lineage4.9 | None | SRR1180066 | Sensitive | lineage4.9 | None | SRR1183360 | Other | lineage4.9 | None | SRR7236240 | Other | La1.8.1 | None | SRR1182929 | Other | lineage4.9 | None | SRR1182960 | Sensitive | lineage4.9 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | ERR4188010 | Other | La1.8.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR7236178 | Other | La1.8.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR1180738 | Other | lineage4.9 | None | SRR1180114 | Other | lineage4.9 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | SRR18391772 | Other | La1.7.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR1183678 | Other | lineage4.9 | None | SRR1183031 | Other | lineage4.9 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR1183214 | Other | lineage4.9 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6855718 | Other | lineage4.8 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR1183020 | Other | lineage4.9 | None | SRR1180025 | Other | lineage4.9 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2515460 | Other | lineage4.8 | za | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | SRR1180743 | Other | lineage4.9 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR1183349 | Other | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR1182908 | Other | lineage4.9 | None | SRR1182990 | Other | lineage4.9 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR1180745 | Other | lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None | SRR21764246 | Other | lineage4.9 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR1183548 | Other | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR1180019 | Other | lineage4.9 | None | SRR1183098 | Other | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR1183270 | Other | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR6982198 | HR-TB | lineage1 | None | SRR1183121 | Other | lineage4.9 | None | SRR6982419 | Other | lineage4.8 | None | SRR1183517 | Other | lineage4.9 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR1183400 | Sensitive | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR1183152 | Other | lineage4.9 | None | SRR1183354 | Other | lineage4.9 | None | SRR7240448 | Other | La1.8.1 | None | SRR1180834 | Other | lineage4.9 | None | SRR1183458 | Sensitive | lineage4.9 | None | SRR1183432 | Other | lineage4.9 | None | SRR1180692 | Sensitive | lineage4.9 | None | SRR10993953 | Other | La1.6 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR1181229 | Other | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR1183225 | Other | lineage4.9 | None | SRR1183472 | Other | lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR7236369 | Other | La1.8.1 | None | SRR1183383 | Other | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR1183483 | Sensitive | lineage4.9 | None |
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