EBG00000313325 - n.534T>G


Drug resistance types
152 Sensitive 15 RR-TB 23 HR-TB 40 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 129 Other
lineage Counts
lineage Count
lineage4.1.1 6
lineage4.6.1 9
lineage4.6.1.2 6
lineage2.2.1 38
16
lineage4.9 76
lineage4.6.1.1 10
lineage4 14
lineage4.8 11
lineage4.1.2.1 9
lineage4.1.1.3 3
lineage2.2.2 4
lineage4.1.2 7
lineage4.3.2.1;lineage3.1.1 1
lineage4.9.1 5
lineage4.3.4.1 5
lineage3 13
lineage3.1.2.1 1
lineage1.1.2 2
lineage4.3.4.2.1 18
lineage4.4 2
La1.8.1 21
lineage4.4.1.1 10
lineage4.3.2.1 8
lineage3.1.2 1
lineage4;lineage3 1
lineage1.2.1.2.1 2
lineage4.6.5 1
lineage2.2.1;lineage1.1.1 1
lineage7 1
lineage4.7 3
lineage4.2.1.1 1
lineage4.6.2.2 2
lineage4.4.1.2 3
lineage5.1.1 1
lineage1.1.3.2 2
lineage2.2 6
lineage4.3.3 12
lineage4;lineage2.2.1 1
lineage4;lineage2 1
lineage4.9;lineage4.3.4.1 2
lineage4.3.4.2 3
lineage2.2.1.1 3
La1.1 1
lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 1
lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 1
lineage4.3.4.2.1;lineage1.1.3 1
lineage4.3.4.1;lineage1.1.2 1
lineage3.1.2.2 1
lineage4.3.4 1
lineage4.1.4 1
La1.8 1
La1.2 7
La1.3 1
La1.8.2 3
lineage4.2.2.2 2
lineage1.2.2.1 1
lineage4.8.1 1
lineage4.4.1.1.1 2
lineage3.1.1 1
La1.6 1
lineage2 1
lineage4.9;lineage1.1 1
lineage1.2.2.2 2
lineage4.9;lineage4.4.2 1
La1.7.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 377
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816238 Sensitive lineage4.1.1 None
ERR1199039 Sensitive lineage4.6.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR027451 Pre-XDR-TB lineage2.2.1 ru
ERR4817131 Pre-XDR-TB None
SRR3742667 Sensitive lineage4.9 None
ERR1199021 Other lineage4.6.1.1 None
ERR019572 HR-TB lineage2.2.1 ru
ERR2179850 Sensitive lineage4 None
ERR2229358 Other lineage4.8 None
ERR2229780 Other lineage4.9 None
ERR2229336 Other lineage4.8 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR4033203 Sensitive lineage4.9 None
ERR4816755 Other lineage4.1.1.3 None
ERR2228859 RR-TB lineage4 None
ERR2228822 Other lineage4.9 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR2229511 Sensitive lineage4.8 None
ERR2228874 Other lineage4 None
ERR2228888 Other lineage4.8 None
ERR245716 Sensitive lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR4818726 Other lineage4.1.2.1 None
ERR1199007 Sensitive lineage4.6.1.1 None
ERR1199009 Sensitive lineage4.6.1.1 None
ERR245740 Sensitive lineage4.1.2 None
SRR5153236 MDR-TB lineage2.2.1 None
ERR245795 Sensitive lineage4.3.2.1;lineage3.1.1 None
ERR245810 Sensitive lineage4.9.1 None
ERR245809 Sensitive lineage4.3.4.1 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR2446433 Other lineage4.1.2.1 None
SRR5341375 Other lineage4.9 None
SRR5341460 Other lineage3 None
SRR5341300 Other lineage4 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5341417 Pre-XDR-TB lineage3 None
SRR5341429 HR-TB lineage3.1.2.1 None
SRR5341430 Other lineage3 None
SRR5341467 Other lineage4 None
SRR5341310 Other lineage1.1.2 None
ERR036231 Sensitive lineage4.3.4.2.1 mw
SAMN02585942 Sensitive lineage4.1.2 None
SRR5341306 Pre-XDR-TB lineage4.4 None
SRR5341317 Pre-XDR-TB lineage3 None
ERR2693238 HR-TB lineage4.9 None
SRR5382721 Other La1.8.1 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SAMN02381047 Sensitive lineage4.6.1 None
SRR6044925 Sensitive lineage4.9 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR6045599 Other lineage4.8 None
SRR6045683 Other lineage3.1.2 None
SRR6044830 Other lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
SRR6046015 Other lineage4.9 None
SRR6045036 Other lineage4;lineage3 None
SRR6045205 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4 None
ERR2851371 Other lineage4.9 None
SRR6046815 Other lineage3 None
SRR6397396 HR-TB lineage1.2.1.2.1 None
SRR6046848 Other lineage4.6.5 None
ERR2843513 Other lineage2.2.1;lineage1.1.1 None
ERR1200631 Sensitive lineage7 et
SRR6152979 Other lineage4.7 None
SRR6397441 Other lineage4 None
SRR6153036 Other None
SRR6397642 RR-TB None
SRR6397727 Other lineage4.2.1.1 None
ERR502482 Sensitive lineage4.9 None
SRR6397770 Other lineage4.7 None
SRR6982078 Sensitive None
ERR502472 Other lineage4.6.2.2 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR6484909 Sensitive lineage2.2.1 None
ERR502480 Other lineage5.1.1 None
ERR502483 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR502490 Sensitive lineage4.9 None
SRR6982414 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6856087 Sensitive lineage4 None
SRR6982102 Other lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
ERR502493 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
SRR6982115 Sensitive lineage4 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982140 Other lineage2.2 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982138 Sensitive lineage4 None
SRR6982139 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982195 RR-TB lineage4.4 None
SRR6982196 Sensitive None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6896539 MDR-TB lineage3 None
SRR6982272 Sensitive lineage4.9 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982362 Other lineage4.3.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6982508 Sensitive lineage4.9 None
SRR6982011 Other lineage4.1.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6855917 Other lineage4.8 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982053 Sensitive lineage4.9;lineage4.3.4.1 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982070 RR-TB None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982066 Other lineage4.3.2.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR6982075 Sensitive lineage3 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982405 Sensitive None
SRR6982076 Sensitive lineage4.9 None
ERR323035 Sensitive lineage4.9 None
ERR5162133 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR9971195 MDR-TB lineage4.3.3 None
SRR7131047 MDR-TB lineage4.3.3 None
SRR7131068 Other lineage4.8 None
SRR7131160 Sensitive lineage3 None
SRR7131185 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7645834 Other lineage2.2.1 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR8065075 Sensitive La1.1 None
SRR8073606 Other La1.8.1 None
SRR8346061 Pre-XDR-TB lineage2.2.1 None
SRR8600288 Other La1.8.1 None
ERR323061 Sensitive lineage4.9 None
ERR037235 Sensitive lineage4.9 None
ERR036185 MDR-TB lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 None
ERR036215 Other lineage4.8 None
ERR323068 Sensitive lineage4.9 None
ERR036194 Other lineage4.6.1.2 None
ERR036211 Other lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 None
ERR036224 HR-TB lineage4.3.4.2.1;lineage1.1.3 None
ERR036233 Sensitive lineage4.3.4.1;lineage1.1.2 None
ERR037234 Sensitive lineage4.9 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR037529 Other lineage4.3.4.2.1 None
ERR11465689 Sensitive lineage4.3.4.1 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR1023527 RR-TB lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR1034687 Sensitive lineage3 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR10796568 Other lineage4.9 None
ERR1082121 Sensitive lineage4.9 None
ERR1144989 Sensitive lineage4.8 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR144568 Pre-XDR-TB None
ERR11465688 Sensitive lineage4.3.4.1 None
ERR3283015 Sensitive lineage4.9 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3797043 HR-TB None
ERR3335798 MDR-TB lineage2.2.1 None
ERR405190 Sensitive lineage4.9 None
ERR3797074 Sensitive lineage4.9 None
ERR400443 Sensitive lineage1.2.1.2.1 None
ERR4187604 RR-TB La1.8.1 None
ERR405191 Other lineage4.9 None
ERR4187645 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187800 Other La1.8.1 None
ERR4187993 Other La1.8.1 None
ERR4187921 Other None
ERR4188222 MDR-TB La1.8.1 None
ERR4188035 Other La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4627369 Other La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR4188381 Other La1.8.1 None
ERR4188395 Other La1.8.1 None
ERR4188352 Other La1.8.1 None
ERR473278 Sensitive lineage4.9 None
ERR4627379 Other La1.8.1 None
ERR4769429 Other lineage4.9 None
ERR473279 Other lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769424 Sensitive lineage4.9 None
ERR4769478 Other La1.2 None
ERR4769467 Sensitive lineage4.9 None
ERR4769428 Other La1.3 None
ERR4769470 Sensitive lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769505 Other lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
ERR4769537 Sensitive lineage4.9 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR4772206 Other La1.2 None
ERR5908213 Sensitive lineage4.3.3 None
ERR5908229 Sensitive lineage4.3.3 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR6149874 Other La1.8.2 None
ERR6140667 Other La1.8.2 None
ERR6149870 Other La1.8.2 None
ERR6201802 Other La1.2 None
ERR6198389 Other La1.2 None
ERR6201798 Other La1.2 None
ERR6397161 Other lineage4.2.2.2 None
ERR6338285 Other La1.2 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
ERR6201843 Other La1.2 None
ERR245846 Sensitive lineage2.2.1 None
ERR245772 Sensitive lineage4.9.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR751317 Sensitive lineage4.9 None
ERR736816 Other lineage4.9 None
ERR7801177 Other lineage4.3.4.2.1 None
ERR779680 Sensitive lineage4.3.4.2.1 None
ERR7821222 Sensitive lineage4.8.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
ERR7801178 Other lineage4.3.4.2.1 None
ERR1034765 HR-TB lineage4.3.3 None
ERR037513 Sensitive lineage4.3.4.2.1 None
ERR036225 Other lineage4.3.4.2.1 None
ERR036191 Sensitive lineage4.9.1 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR245764 HR-TB lineage3.1.1 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9119098 Sensitive lineage4.3.3 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
ERR987766 HR-TB lineage4.3.3 None
SRR1011488 Other lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013610 HR-TB lineage4 None
SRR1013618 MDR-TB None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1049622 MDR-TB lineage4.4.1.1 None
SRR1049031 HR-TB lineage4.9 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049743 Sensitive lineage4.6.1 None
SRR1049724 MDR-TB lineage4.6.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1062859 Sensitive lineage2.2.1 None
SRR1062895 Other lineage4.6.1.1 None
SRR1062927 MDR-TB lineage4.6.1 None
SRR1062898 MDR-TB lineage4.3.4.2.1 None
SRR1062937 HR-TB lineage4.6.1 None
SRR1062933 Sensitive lineage4.9 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR10993957 Other La1.6 None
SRR1140586 HR-TB lineage4.9 None
SRR11349188 MDR-TB lineage4.1.2.1 None
SRR1140627 Other lineage4.6.1 None
SRR1140729 MDR-TB lineage4.4.1.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140750 MDR-TB lineage4.3.4.2.1 None
SRR1159158 Other lineage2.2.1 None
SRR1162501 Other lineage2.2.1 None
SRR1180252 Other lineage4.9 None
SRR1173190 Sensitive lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
SRR1180982 Other lineage2.2.1 None
SRR1181161 Other lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1181136 Sensitive lineage2.2 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1181250 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1181319 Other lineage2.2.1 None
SRR1182994 Sensitive lineage4.1.2 None
SRR17406750 Other lineage1.1.2 None
SRR1184383 Other lineage4.9 None
SRR11972311 Pre-XDR-TB None
SRR12199465 Sensitive lineage2.2.1.1 None
SRR124452 HR-TB lineage2 None
SRR124453 HR-TB None
SRR13591410 Other lineage4.9;lineage4.3.4.1 None
SRR13861438 Other lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR124451 HR-TB None
SRR13861164 Other lineage4.9 None
SRR13861244 Other lineage4.9 None
SRR13861312 Other lineage4.9 None
SRR13861457 Other lineage4.9 None
SRR14088382 MDR-TB lineage3 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR17832798 Other lineage3 None
SRR1792247 Other La1.7.1 None
SRR1791940 Other La1.8.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101678 Sensitive lineage4.4.1.1.1 None
SRR18213726 Other lineage3 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101685 Sensitive lineage4.9 None
SRR2101689 Other lineage4.3.4.1 None
SRR21239778 Sensitive lineage4.3.3 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21728339 Other lineage3 None
ERR176771 Sensitive None
SRR21728710 Other lineage4.1.1.3 None
SRR21737226 Sensitive lineage4.5 None
SRR22424905 RR-TB lineage4.9 None
ERR1465744 Sensitive lineage4.1.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR176780 Sensitive lineage4.9 None
ERR1198988 Sensitive lineage4.6.1.1 None
ERR1815548 Other La1.8.1 None
SRR3105736 Other lineage1.2.2.2 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR245847 Sensitive lineage4.9.1 mw
SAMN02381009 MDR-TB lineage4.4.1.1 None
SAMN02419540 Other lineage2.2.1 None
ERR163988 Sensitive lineage4.1.2 None
SAMN02381005 Other lineage4.6.1.1 None
ERR176547 Sensitive lineage4.6.1.1 None
ERR2179857 RR-TB lineage4 None
ERR4815040 Other lineage4.2.2.2 None
SAMN02381037 MDR-TB lineage4.6.1 None
SRR1723567 MDR-TB lineage2.2.1 cn
SRR1723660 MDR-TB lineage2.2.1 cn
ERR192070 Other None
ERR2228941 Other lineage4.8 None
ERR2229033 Other lineage4.8 None