EBG00000313325 - n.991G>C
Drug resistance types
100 Sensitive
13 RR-TB
10 HR-TB
15 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 5 |
| lineage4.1.2 | 7 |
| lineage4.1.1.3 | 6 |
| lineage4.3.4.2 | 6 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 2 |
| La1.6 | 1 |
| La1.8.1 | 5 |
| lineage2.2.1 | 33 |
| La1.2 | 2 |
| 7 | |
| lineage4.9 | 15 |
| lineage3 | 6 |
| lineage4.9.1 | 1 |
| lineage4.3.2.1 | 15 |
| lineage4.4.1.1.1 | 4 |
| lineage4.8 | 8 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1 | 8 |
| lineage4.4.1.1 | 10 |
| lineage4.3.3 | 11 |
| lineage1.2.1.2.1 | 2 |
| lineage4.1.1.2 | 2 |
| lineage1.1.3.2 | 5 |
| lineage4.3.4.2.1 | 7 |
| lineage4.7 | 4 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.6.4 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.8.1 | 1 |
| lineage4 | 3 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 4 |
| lineage1.2.2.1 | 1 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.4.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 210 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13199739 | Other | La1.7.1 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972802 | RR-TB | lineage4.1.1.3 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10993956 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR15368973 | Other | None | SRR13199746 | Other | La1.7.1 | None | SRR1791909 | Other | La1.7.1 | None | SRR1791921 | Other | La1.8.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR18391772 | Other | La1.7.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR18911138 | Other | lineage3 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101816 | Other | lineage4.8 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21686601 | Other | lineage1.2.1.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | SRR3675491 | Other | lineage4.7 | None | ERR1577252 | HR-TB | lineage2.2.1 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR3675452 | Other | lineage3 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4817107 | Other | lineage3 | gb | ERR2124090 | MDR-TB | lineage2.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4818319 | Sensitive | lineage3.1.3 | gb | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2515447 | Sensitive | lineage2.2.1 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | ERR2515460 | Sensitive | lineage4.8 | za | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4820340 | Other | lineage2.2.1 | gb | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR2515484 | Other | lineage4.8 | None | ERR2515662 | Other | lineage2.2.1 | za | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR6982410 | Other | lineage4.8.1 | None | ERR2851371 | Other | lineage4.9 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6046152 | Other | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6982078 | Sensitive | None | SRR6856087 | Sensitive | lineage4 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6896539 | MDR-TB | lineage3 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981912 | Sensitive | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6981962 | Sensitive | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982405 | Sensitive | None | SRR6982070 | RR-TB | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7453032 | Sensitive | lineage2.2.1.2 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR3283051 | Other | lineage4.9 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR6337385 | Other | La1.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None |
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