EBG00000313339 - n.2980C>G
Drug resistance types
104 Sensitive
3 RR-TB
6 HR-TB
11 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| lineage4.3.2.1 | 8 |
| lineage4.9 | 11 |
| lineage4.8 | 6 |
| lineage4.3.4.2.1 | 10 |
| lineage2.2.1 | 22 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4.1.2 | 8 |
| La1.6 | 2 |
| lineage4.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.4.1.1 | 8 |
| lineage4.3.4.1 | 5 |
| lineage4.1.1.3 | 5 |
| La1.8.1 | 6 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.5 | 1 |
| La1.7.1 | 2 |
| lineage3.1.1 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.8.X-unk6 | 1 |
| lineage2.2.2 | 9 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage1.1.1 | 2 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 4 |
| lineage4.7 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage5.1.1 | 2 |
| La1.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage1.2.2.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.1 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| 1 | |
| lineage1.2.2.2 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6855718 | Sensitive | lineage4.8 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR21714045 | Other | lineage2.2.1 | None | ERR181761 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR3324345 | RR-TB | lineage4.1 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR7240147 | Other | La1.8.1 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | ERR161047 | Sensitive | lineage4.4.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR1792247 | Other | La1.7.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR7240420 | Other | La1.8.X-unk6 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR7236390 | Other | La1.8.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR10993957 | Other | La1.6 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | ERR502480 | Other | lineage5.1.1 | None | SRR13199734 | Other | La1.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR212100 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR1792232 | Other | La1.7.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR1183517 | Other | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR7240350 | Other | La1.8.1 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR751729 | Other | lineage1.1.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR144568 | Sensitive | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR212033 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR1181191 | Other | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | ERR161125 | Sensitive | lineage4 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR7236233 | Other | La1.8.1 | None |
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