EBG00000313325 - n.825G>T
Drug resistance types
21 Sensitive
19 RR-TB
24 HR-TB
12 MDR-TB
10 Pre-XDR-TB
2 XDR-TB
236 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 5 |
| lineage4.3.1.1 | 4 |
| lineage4.1.1.1 | 6 |
| lineage3.1 | 2 |
| lineage4.5 | 5 |
| lineage4.3.3 | 15 |
| lineage4.1.2.1 | 36 |
| lineage2.2.1 | 26 |
| lineage1.1.2 | 10 |
| lineage4.4.1.1 | 7 |
| lineage3 | 48 |
| lineage4.1.1.3.1 | 8 |
| lineage4.7 | 8 |
| lineage4 | 3 |
| lineage4.8 | 25 |
| lineage4.1.2 | 7 |
| lineage4.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.1 | 4 |
| lineage4.6.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.2.1.2.1 | 5 |
| lineage1.2.2.1 | 1 |
| lineage4.1.1.3 | 6 |
| lineage1.1.3 | 2 |
| lineage1 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.2.2.2 | 7 |
| lineage3.1.2.1 | 3 |
| lineage3.1.3 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.2.1 | 6 |
| lineage3.1.2 | 3 |
| lineage4.6.2.2 | 6 |
| lineage4.6 | 1 |
| M.bovis | 1 |
| lineage4.1.3 | 1 |
| lineage4.6.5 | 3 |
| lineage4.4.2 | 1 |
| M.orygis | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.1.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| La1.6 | 2 |
| lineage1.1.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.8.2 | 3 |
| lineage4.1 | 1 |
| La3 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| 3 | |
| lineage4.3.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.4 | 1 |
| lineage4.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 324 |
Geographic prevalence
Country level data for this variant is available for 135 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796574 | Other | lineage4.9 | None | SRR6046016 | Other | lineage4.3.1.1 | gb | ERR4817342 | Other | lineage4.1.1.1 | None | ERR4815427 | HR-TB | lineage3.1 | gb | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4817508 | Other | lineage4.1.2.1 | gb | SRR5007171 | Other | lineage2.2.1 | None | SRR3675361 | Other | lineage1.1.2 | gb | ERR4816681 | Other | lineage4.1.2.1 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4816649 | Other | lineage3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4819196 | Other | lineage4.1.1.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046646 | Other | lineage4.7 | gb | ERR4818274 | Other | lineage4 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4815089 | HR-TB | lineage2.2.1 | gb | ERR4820001 | Sensitive | lineage4.8 | gb | SRR3675556 | Other | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4820132 | Other | lineage4.1.2 | None | ERR2512986 | Other | lineage3 | None | ERR4821477 | Other | lineage4.8 | None | SRR6153221 | Other | lineage4.2.2 | ca | ERR4819181 | Other | lineage3 | gb | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR6045335 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR3276005 | Other | lineage4.1.2.1 | nl | ERR4814362 | Other | lineage4.8 | None | ERR4818480 | HR-TB | lineage3 | gb | ERR4819458 | Other | lineage4.1.1.3.1 | gb | SRR5007203 | Other | lineage2.2.1 | None | SRR6046173 | Other | lineage3 | None | ERR4818855 | Other | lineage4.1.2.1 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR4821372 | Other | lineage4.1.2.1 | None | SRR6398013 | Other | lineage4.1.2 | ca | ERR4817169 | Sensitive | lineage4.7 | gb | SRR1735639 | Sensitive | lineage4.5 | gb | ERR2514540 | Other | lineage3 | gb | ERR4815641 | Other | lineage4.3.4.2 | gb | SRR5818666 | Other | lineage3 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR2513841 | Sensitive | lineage4.1.1.3.1 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4814881 | Other | lineage2.2.1 | gb | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817907 | Other | lineage3 | gb | ERR4817170 | Other | lineage4.1.2.1 | gb | ERR4815496 | Other | lineage3 | gb | ERR4815178 | Other | lineage4.8 | gb | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4816314 | Other | lineage1.2.1.2.1 | gb | ERR4820713 | HR-TB | lineage4.8 | None | ERR4821449 | Other | lineage1.2.2.1 | gb | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR2514514 | RR-TB | lineage3 | gb | ERR4819082 | Other | lineage1.1.2 | gb | ERR2514608 | Other | lineage1.1.3 | gb | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816969 | Other | lineage4.8 | None | ERR4816437 | Other | lineage3 | gb | ERR4821719 | Other | lineage3 | gb | ERR4818988 | Other | lineage1 | None | SRR6046891 | Other | lineage4.7 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2513356 | Other | lineage4.5 | gb | ERR4822085 | Other | lineage4.8 | gb | SRR5818622 | Sensitive | lineage4.2.2.2 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | ERR4818753 | Other | lineage3 | gb | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4819192 | Other | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4814285 | HR-TB | lineage4.1.2.1 | gb | SRR6398097 | Other | lineage4.2.1.1 | ca | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4816081 | Other | lineage4.8 | gb | SRR6153170 | Other | lineage4.9 | ca | ERR4820188 | Other | lineage3 | gb | SRR6045420 | Other | lineage4.1.2.1 | gb | ERR4821796 | Other | lineage4.1.1.1 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4815476 | HR-TB | lineage2.2.1 | gb | SRR6045600 | Other | lineage3.1.2 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2514315 | Other | lineage3 | gb | ERR4816182 | Other | lineage3.1.2.1 | gb | SRR5818644 | Sensitive | lineage4.2.2.2 | dj | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4821561 | HR-TB | lineage4.6.2.2 | None | ERR4820498 | HR-TB | lineage4.8 | gb | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | SRR6046090 | HR-TB | lineage4.6 | gb | ERR4820424 | Other | M.bovis | gb | ERR4820941 | HR-TB | lineage3 | gb | SRR6152665 | HR-TB | lineage4.1.1.1 | ca | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4816955 | Other | lineage4.3.3 | gb | ERR4816757 | Other | lineage2.2.1 | gb | ERR4817294 | Other | lineage4.1.2 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4818810 | Other | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR4816988 | Other | lineage3 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4815040 | Other | lineage4.2.2.2 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4820543 | Other | M.orygis | None | SRR6046189 | Other | lineage4.8 | None | SRR6045325 | Other | lineage4.8.1 | gb | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR5818672 | Other | lineage1.2.2.2 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR2512494 | Other | lineage4.3.3 | gb | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR5007161 | RR-TB | lineage4.1.1 | None | SRR6046064 | Other | lineage3 | gb | ERR4821958 | Other | lineage4.3.3 | gb | ERR4818952 | Other | lineage3 | None | ERR4818846 | Other | lineage4.1.2.1 | gb | SRR6152949 | Other | lineage1.2.1.2.1 | ca | ERR4815684 | Other | lineage5.1.4 | gb | SRR3675513 | Other | lineage4.8 | None | ERR4821940 | Other | lineage4.9 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4821543 | Other | lineage4.3.2.1 | gb | ERR4819770 | Other | lineage4.8 | gb | SRR6045396 | Sensitive | lineage4.3.1.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | ERR4814748 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4816968 | Other | lineage4.2.1 | gb | SRR5818610 | Other | lineage3 | None | ERR4821849 | Other | lineage4.5 | gb | ERR4814355 | Other | La1.6 | gb | ERR4820652 | Other | lineage1.1.1 | gb | ERR4815039 | Other | lineage4.1.1.3.1 | gb | ERR2513378 | Other | lineage3 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2513398 | Other | lineage4.2.1 | gb | ERR4814932 | Other | lineage4.1.1.1 | None | SRR6046223 | Sensitive | lineage3 | gb | ERR4821214 | RR-TB | lineage1.2.1.2.1 | None | ERR4815299 | Other | lineage4.8 | gb | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR2513886 | Other | lineage4.2.1.1 | gb | ERR2515032 | Other | lineage3 | None | ERR2514457 | Other | lineage4.1.1.1 | gb | SRR6046159 | Other | lineage4.8.2 | None | ERR4818801 | Sensitive | lineage4.7 | gb | SRR6045768 | Other | lineage4.1.2.1 | gb | ERR4815502 | Other | lineage4.1 | None | SRR5818665 | Other | lineage4.6.5 | dj | SRR6045621 | Other | lineage4.1.1.3 | None | ERR2513868 | Other | lineage3 | gb | SRR3675538 | Other | lineage4.8 | None | SRR3675225 | Other | lineage2.2.1.2 | None | ERR2514838 | Other | lineage4.8 | gb | ERR4819332 | Other | lineage3 | gb | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR2512544 | Other | lineage1.1.2 | gb | ERR4821288 | Other | lineage4.7 | None | SRR6045962 | Sensitive | La3 | gb | SRR6046442 | Other | lineage3 | None | ERR4820690 | Other | lineage4.1.1 | gb | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4818763 | Other | lineage3 | gb | ERR4820049 | Other | lineage4.8 | gb | ERR4816713 | Other | lineage1.1.2 | gb | ERR4814703 | Other | lineage4.1.1 | gb | ERR2514479 | Other | lineage4.8.2 | gb | ERR2515823 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4817102 | Sensitive | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817795 | Other | lineage4.7 | gb | ERR4821907 | Other | lineage4.1.1.3 | gb | ERR4819727 | Other | lineage1.1.3.1 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821932 | Other | lineage2.2.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | ERR9117696 | Other | lineage4.1.2.1 | None | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR18053779 | Other | La1.7.1 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR20970048 | Other | lineage4.2.2 | None | SRR3675453 | Sensitive | lineage4.8.2 | gb | SRR6045846 | Other | lineage4.4.1.1 | None | SRR6045288 | Other | lineage3 | gb | SRR6046092 | HR-TB | lineage4.8 | gb | SRR3675485 | Other | lineage2.2.1 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816353 | Other | lineage2.2.1 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4815945 | Other | lineage3.1.2 | gb | ERR10796630 | HR-TB | None | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4822193 | Sensitive | lineage4.2.1 | None | ERR4820297 | Other | lineage4.2.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821538 | Other | lineage3 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | ERR9117706 | Other | lineage4.4 | None | SRR11349173 | RR-TB | lineage2.2.1 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | ERR9117799 | Sensitive | lineage4.8 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR5007182 | MDR-TB | lineage3 | None | SRR6045833 | Other | lineage3.1 | gb | SRR6046636 | Other | lineage4.3.1.1 | gb | SRR6046384 | Other | lineage4.3.1.1 | gb | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR6046528 | Other | lineage3.1.2.1 | None | ERR2514896 | Other | lineage3 | gb | ERR2514609 | HR-TB | lineage3 | gb | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR4815901 | Other | lineage2.2 | None | ERR4814801 | Other | lineage4.8 | gb | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816232 | Other | lineage4 | None | ERR4817354 | Other | lineage3 | gb | ERR4816690 | Other | None | ERR4819555 | Other | lineage4.8 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819958 | Other | lineage3 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4820059 | Other | lineage3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4828962 | Other | lineage4.1.4 | it | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315705 | MDR-TB | lineage4.4.1.1.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR5818662 | Sensitive | lineage4.2.2.2 | dj | SRR2101497 | Sensitive | lineage4.3.2.1 | None | SRR21686114 | Other | lineage3.1.3 | None | SRR6044817 | Other | lineage3 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR6045705 | Other | lineage4.9 | None | ERR2512716 | HR-TB | lineage4.6.2.2 | gb | ERR2512599 | Other | lineage3 | gb | SRR9971153 | Pre-XDR-TB | lineage4.3.3 | None | ERR2514834 | Other | lineage4.7 | None | ERR2513699 | Other | lineage4.1.2 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4815101 | Other | lineage3 | gb | ERR4814790 | Other | lineage4.2.1 | None | ERR3470663 | Sensitive | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4815919 | Other | lineage4.8 | None | ERR4818151 | Other | lineage2.2.1 | gb | ERR4815903 | Other | lineage4.1.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4819131 | Other | lineage4 | None | ERR4820558 | Other | lineage4.8 | gb | ERR4821773 | Other | La1.6 | None | ERR4821011 | Other | lineage6 | None | ERR4820717 | Other | lineage1.1.3 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4872152 | RR-TB | lineage4.6.2.2 | None | ERR4822154 | Other | lineage4.1.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
