EBG00000313325 - n.1225G>A
Drug resistance types
113 Sensitive
0 RR-TB
9 HR-TB
18 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 2 |
| lineage2.2.1 | 27 |
| lineage4.3.3 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 35 |
| lineage6.1.1 | 2 |
| lineage1.1.3.2 | 3 |
| lineage2.2.2 | 10 |
| lineage4.1.2.1 | 5 |
| lineage4.8 | 2 |
| lineage3.1.1 | 5 |
| lineage4 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage3 | 6 |
| lineage4.4.1.1.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.1.2.1.1 | 1 |
| La1.4 | 1 |
| La1.3 | 3 |
| lineage1.2.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2 | 7 |
| lineage4.3.4.2.1 | 10 |
| lineage6.2.2 | 2 |
| La1.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1.8.1 | 10 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9.1 | 3 |
| lineage4.6.1.2 | 2 |
| lineage4.3.2.1 | 4 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| La1.6 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.1.2 | 4 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 190 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792247 | Other | La1.7.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR1208669 | Sensitive | lineage4.9 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR245764 | HR-TB | lineage3.1.1 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR161125 | Sensitive | lineage4 | None | SRR1208969 | Sensitive | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR5341460 | Other | lineage3 | None | SRR6789621 | Other | lineage4.9 | None | ERR181905 | Sensitive | lineage2.2.1 | mw | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | SRR22175227 | HR-TB | lineage3 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR16278273 | Other | La1.4 | None | ERR4769471 | Other | La1.3 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR1202613 | Other | lineage4.9 | None | SRR1208750 | Sensitive | lineage4.9 | None | SRR124453 | HR-TB | lineage2.2.2 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | SRR1208653 | Other | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR124451 | Sensitive | lineage2.2.2 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR10482948 | Other | La1.8.1 | None | SRR1208788 | Other | lineage4.9 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR5311095 | Other | La1.8.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | SRR3725588 | Sensitive | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1202496 | Sensitive | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR4769428 | Sensitive | La1.3 | None | SRR1208431 | Sensitive | lineage4.9 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR1209019 | Sensitive | lineage4.9 | None | SRR7240148 | Other | La1.8.1 | None | SRR1208615 | Other | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR987719 | HR-TB | lineage3 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR7236233 | Other | La1.8.1 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1209021 | Sensitive | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR2179850 | Sensitive | lineage4 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | ERR036191 | Sensitive | lineage4.9.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR10993957 | Other | La1.6 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR1208325 | Sensitive | lineage4.9 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | ERR4828514 | HR-TB | lineage2.2.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR1208783 | Other | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR7240147 | Other | La1.8.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR9786538 | Other | lineage4.3.4.2 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR164021 | MDR-TB | lineage1.2.2.2;lineage4.3.4.2.1 | mw | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR1202578 | Sensitive | lineage4.9 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR1208805 | Sensitive | lineage4.9 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR1208769 | Sensitive | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR4188021 | Other | La1.8.1 | None | SRR17832798 | Sensitive | lineage3 | None | ERR779662 | Sensitive | lineage3.1.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR5341430 | Other | lineage3 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | SRR1208313 | Other | lineage4.9 | None | SRR11348198 | Sensitive | lineage1.1.2 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | SRR1202721 | Sensitive | lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3725595 | Sensitive | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR751729 | Other | lineage1.1.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR9786663 | Other | lineage4.3.4.2 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | SRR7240350 | Other | La1.8.1 | None | ERR4188395 | Sensitive | La1.8.1 | None | ERR4769462 | Other | La1.3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | DRR184913 | Sensitive | lineage2.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR1208467 | Sensitive | lineage4.9 | None | SRR1792265 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR1202603 | Sensitive | lineage4.9 | None |
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