EBG00000313339 - n.2557G>C


Drug resistance types
105 Sensitive 10 RR-TB 9 HR-TB 21 MDR-TB 8 Pre-XDR-TB 1 XDR-TB 75 Other
lineage Counts
lineage Count
La1.2.BCG 6
La1.8.1 12
lineage4.1.2.1 4
lineage3 7
lineage3.1.1 3
lineage4.8 8
lineage2.2.1 45
lineage4.3.4.2 6
lineage4.9 24
lineage4.1.1.3 5
lineage4.3.2.1 10
lineage4.3.3 13
La1.7.1 2
lineage4.3.4.1 3
La1.7;lineage2.2.1 1
lineage4.3.4.2.1 5
lineage2.2.1;lineage4.9 2
lineage4.4.1.1.1 5
lineage4.1.2 8
lineage3.1.2 2
lineage4.3.2.1;lineage4.9 1
lineage4.1.4 2
lineage4.6.2.2 2
lineage2.2.1.1 1
lineage4.5 2
lineage1.1.3.2 2
lineage4.2.2 1
lineage4.4.1.1 9
lineage2.2.2 2
lineage4.2.1 3
lineage4.1.1.1 3
lineage4.2.1.1;lineage4.8 1
lineage4.1.1.3;lineage4.9 1
lineage1.2.1.1 1
lineage4.3.2 1
lineage4.1.1 1
lineage4.7 5
lineage4.8.2 1
lineage4.1.1.1;lineage4.9 1
lineage6.1.3 1
lineage1.1 1
lineage4.4.2 1
lineage1.2.1.2.1 1
La1.4 1
lineage4.8.1 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.1.1.3.1 1
lineage4 1
lineage4.2.2.2 1
lineage2.2.1;lineage4.1.2.1 1
1
lineage1.2.2.1 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.8.2;lineage4.9 1
lineage4.6.1.2 1
La1.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 229
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1915487 Other La1.2.BCG None
ERR4188202 Other La1.8.1 None
ERR10219868 Other lineage4.1.2.1 None
SRR3675556 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR2027293 Other lineage4.3.4.2 None
ERR4188035 Other La1.8.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982075 Sensitive lineage4.9 None
SRR6982138 Sensitive lineage4.1.1.3 None
SRR9971017 HR-TB lineage2.2.1 None
SRR11342680 Other lineage4.8 None
ERR4188253 Other La1.8.1 None
ERR5162133 Sensitive La1.8.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982057 HR-TB lineage4.3.3 None
SRR18003042 Other lineage2.2.1 None
SRR18391683 Other La1.7.1 None
SRR1915490 Other La1.2.BCG None
SRR2101685 Sensitive lineage4.9 None
ERR8025347 Sensitive lineage4.9 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR20969923 Other La1.7;lineage2.2.1 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
ERR502490 Sensitive lineage4.9 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR6982100 Sensitive lineage4.4.1.1.1 None
SRR11342656 MDR-TB lineage2.2.1 None
SRR7069628 Other lineage4.1.2.1 None
SRR11342682 Other lineage4.1.2 None
SRR1915483 HR-TB La1.2.BCG None
SRR10129718 Sensitive lineage4.3.3 None
SRR6045516 Other lineage3.1.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
ERR9117714 Other lineage3.1.2 None
ERR1665403 MDR-TB lineage2.2.1 None
SRR6855915 Sensitive lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR10123881 Sensitive lineage4.1.4 None
SRR6982229 Sensitive lineage2.2.1 None
SRR7131004 Other lineage4.6.2.2 None
SRR6855828 Other lineage4.3.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR10869074 Sensitive lineage2.2.1.1 None
SRR6824324 Other lineage4.5 None
SRR1915484 Other La1.2.BCG None
ERR3324375 Other lineage1.1.3.2 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR10614047 Sensitive lineage4.9 None
SRR6982419 Other lineage4.8 None
ERR3559289 HR-TB lineage4.2.2 None
ERR5087912 Other La1.8.1 None
SRR6855851 Other lineage4.3.4.2.1 None
SRR3675512 Other lineage2.2.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR1915485 Other La1.2.BCG None
ERR5311080 Other La1.8.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR2101659 Other lineage4.4.1.1.1 None
ERR5864322 MDR-TB lineage4.2.1 None
SRR10129360 Sensitive lineage4.3.4.2 None
SRR6981948 Sensitive lineage4.3.2.1 None
ERR5162118 Other La1.8.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR2101617 Sensitive lineage4.1.1.1 None
ERR2027252 Other lineage4.2.1.1;lineage4.8 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101816 Other lineage4.8 None
SRR6045726 Other lineage3 None
SRR15316084 Other lineage2.2.1 None
SRR5818389 Other lineage4.9 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6982043 Sensitive lineage4.4.1.1 None
ERR3261351 Other lineage4.9 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR8217919 HR-TB lineage2.2.1 None
SRR3675261 Other lineage1.2.1.1 None
ERR3148546 Other lineage4.3.2 None
SRR6982385 Sensitive lineage4.1.2 None
SRR18002915 Sensitive lineage2.2.1 None
SRR11342683 Other lineage4.1.2 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982139 Sensitive lineage4.9 None
SRR6982328 Sensitive lineage3.1.1 None
SRR1915486 HR-TB La1.2.BCG None
SRR6982456 Sensitive lineage4.1.1.3 None
SRR6982510 Sensitive lineage2.2.1;lineage4.9 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR6982014 Sensitive lineage4.1.1 None
SRR3675491 Other lineage4.7 None
SRR6045205 Sensitive lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4188255 Sensitive lineage4.9 None
ERR867555 Other lineage3 None
SRR6981981 Sensitive lineage4.3.3 None
ERR3335798 MDR-TB lineage2.2.1 None
SRR6981982 Sensitive lineage4.1.2.1 None
SRR6045267 RR-TB lineage4.8 None
SRR5007169 RR-TB lineage4.8.2 None
SRR6896339 MDR-TB lineage2.2.1 None
ERR9786543 Sensitive lineage4.1.2.1 None
SRR18002997 Other lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982297 Sensitive lineage4.1.1.1;lineage4.9 None
SRR10129358 Sensitive lineage4.3.4.2 None
SRR2101678 Sensitive lineage4.4.1.1.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR6855774 Other lineage2.2.1 None
SRR6044841 Other lineage4.9 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR7240506 Other La1.8.1 None
SRR12199472 Sensitive lineage1.1 None
SRR20969951 Other lineage4.4.2 None
SRR7069319 Other lineage4.5 None
SRR6982337 Sensitive lineage4.7 None
SRR7069981 Other lineage3 None
SRR10129602 Sensitive lineage4.3.4.2 None
ERR5162108 Other La1.8.1 None
SRR6982056 Other lineage4.3.4.2.1 None
ERR3261389 Other lineage4.9 None
ERR5865119 MDR-TB lineage2.2.1 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR3675256 Other lineage4.7 None
ERR7821182 Other lineage1.1.3.2 None
ERR4769419 Sensitive lineage4.9 None
ERR3324354 Sensitive lineage4.8 None
SRR18002908 Other lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR3675485 Other lineage2.2.1 None
SRR21001883 XDR-TB lineage2.2.1 None
SRR14782760 Sensitive lineage4.3.4.1 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR1735598 RR-TB lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR11349205 MDR-TB lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
ERR2027256 Other lineage4.1.2 None
SRR16278292 Other La1.4 None
SRR6045909 Other lineage4.8.1 None
SRR6981993 Sensitive lineage4.3.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6046273 Other lineage3.1.2 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR502483 Sensitive lineage4.9 None
ERR2851354 Other lineage4.9 None
SRR21798279 MDR-TB lineage2.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR5007165 Other lineage3 None
SRR6982037 Sensitive lineage4.1.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR11349193 RR-TB lineage4.1.2 None
ERR7911622 Pre-XDR-TB lineage2.2.2 None
SRR10123877 Sensitive lineage4.1.4 None
SRR10129719 Sensitive lineage4.3.3 None
SRR10130137 Sensitive lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR2179857 Sensitive lineage4 None
SRR2101540 Sensitive lineage4.3.2.1 None
ERR5865118 MDR-TB lineage2.2.1 None
SRR10130139 Sensitive lineage4.3.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR7240537 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
SRR18391772 Other La1.7.1 None
ERR4627392 Other La1.8.1 None
ERR4863405 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR6982196 Sensitive None
SRR2101312 MDR-TB lineage2.2.1 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6982048 Sensitive lineage4.3.2.1 None
SRR6982205 Sensitive lineage1.2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR2101681 Sensitive lineage4.8 None
ERR3261359 Other lineage4.9 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR4769507 Sensitive lineage4.9 None
SRR21714045 Other lineage2.2.1 None
SRR6511600 MDR-TB lineage4.3.4.2 None
SRR6982195 Sensitive lineage4.4.1.1 None
SRR6982227 Sensitive lineage4.9 None
SRR10129717 Sensitive lineage4.3.3 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR3675452 Other lineage3 None
ERR2693238 Sensitive lineage4.9 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
ERR502484 Sensitive lineage4.9 None
ERR5865337 MDR-TB lineage2.2.1 None
ERR5864323 MDR-TB lineage4.2.1 None
SRR17856664 Sensitive lineage3 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR987757 MDR-TB lineage4.6.1.2 None
SRR6981975 Sensitive lineage4.7 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4188372 Sensitive La1.8.1;lineage4.9 None
SRR15368914 MDR-TB lineage2.2.1 None
SRR6855917 Sensitive lineage4.8 None
SRR6982077 Sensitive lineage4.3.2.1 None