EBG00000313339 - n.2557G>C
Drug resistance types
102 Sensitive
10 RR-TB
7 HR-TB
21 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 45 |
| lineage4.3.2.1 | 10 |
| lineage4.1.4 | 2 |
| lineage4.9 | 24 |
| lineage4.4.1.1.1 | 5 |
| lineage4.3.4.2 | 6 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 13 |
| La1.8.1 | 12 |
| lineage4.4.1.1 | 9 |
| lineage4.8 | 8 |
| lineage3.1.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.2 | 8 |
| lineage3.1.1 | 3 |
| lineage4.7 | 5 |
| lineage4.1.1.1 | 3 |
| lineage3 | 7 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1.3 | 5 |
| La1.2.BCG | 6 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.2.1 | 3 |
| lineage1.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1 | 1 |
| 1 | |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 3 |
| La1.7.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| La1.8.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage4 | 1 |
| lineage4.2.2.2 | 1 |
| La1.7;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 229 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15316084 | Other | lineage2.2.1 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR10123877 | Sensitive | lineage4.1.4 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR3261351 | Other | lineage4.9 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR2027293 | Other | lineage4.3.4.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981981 | Sensitive | lineage4.3.3 | None | ERR4188253 | Other | La1.8.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR10123881 | Sensitive | lineage4.1.4 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR6982328 | Other | lineage3.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR7069981 | Other | lineage3 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR3261389 | Other | lineage4.9 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR1915485 | Other | La1.2.BCG | None | SRR5007165 | Other | lineage3 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR10219868 | Other | lineage4.1.2.1 | None | ERR5162108 | Other | La1.8.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR1915486 | Other | La1.2.BCG | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | SRR18002915 | Sensitive | lineage2.2.1 | None | SRR10130139 | Sensitive | lineage4.3.3 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR10129717 | Sensitive | lineage4.3.3 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | SRR3675452 | Other | lineage3 | None | SRR16278292 | Other | La1.4 | None | SRR6981982 | Sensitive | lineage4.1.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101816 | Other | lineage4.8 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR10129358 | Sensitive | lineage4.3.4.2 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR3261359 | Other | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1915483 | Other | La1.2.BCG | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | SRR6982456 | Sensitive | lineage4.1.1.3 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | ERR867555 | Other | lineage3 | None | SRR17856664 | Sensitive | lineage3 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR10130137 | Sensitive | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR6824324 | Other | lineage4.5 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR6982419 | Other | lineage4.8 | None | ERR3559289 | HR-TB | lineage4.2.2 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR6982196 | Sensitive | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6982050 | Other | lineage4.3.4.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR6982075 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR4188035 | Other | La1.8.1 | None | SRR18391683 | Other | La1.7.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR3675556 | Other | lineage3 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR18391772 | Other | La1.7.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6855774 | Other | lineage2.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | ERR5865337 | MDR-TB | lineage2.2.1 | None | SRR10129718 | Sensitive | lineage4.3.3 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR20969951 | Other | lineage4.4.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR3675485 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | ERR5087912 | Other | La1.8.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR3675512 | Other | lineage2.2.1 | None | SRR7240537 | Other | La1.8.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR5162118 | Other | La1.8.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR10129719 | Sensitive | lineage4.3.3 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR10129360 | Sensitive | lineage4.3.4.2 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2851354 | Other | lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR1915490 | Other | La1.2.BCG | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR2101827 | Other | lineage4.3.4.2.1 | None | ERR2179857 | Sensitive | lineage4 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR11342682 | Other | lineage4.1.2 | None |
|---|
