EBG00000313325 - n.1270G>C
Drug resistance types
122 Sensitive
4 RR-TB
6 HR-TB
11 MDR-TB
11 Pre-XDR-TB
2 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 34 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.3.4.2.1 | 11 |
| lineage4.9 | 28 |
| lineage4.8 | 9 |
| La1.2.BCG | 4 |
| lineage4.3.2.1;lineage4.9 | 1 |
| La1.8.X-unk6 | 1 |
| La1.6 | 2 |
| lineage1.1.2;lineage4 | 1 |
| La1.8.1 | 13 |
| 1 | |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage5.1.1 | 1 |
| La1.7.1 | 2 |
| lineage4.3.2.1 | 9 |
| lineage2.2.2 | 7 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 11 |
| lineage3 | 3 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.4 | 1 |
| lineage1.1.3.2 | 4 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 9 |
| lineage4.1.2 | 4 |
| lineage4.3.4.2 | 3 |
| lineage4.5 | 2 |
| lineage6.1.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.2.1.1 | 1 |
| La1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.7 | 2 |
| lineage4.9.1 | 1 |
| lineage4.1 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 1 |
| La1.3 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 204 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982058 | HR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR1915485 | Other | La1.2.BCG | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR7240420 | Other | La1.8.X-unk6 | None | SRR6981939 | Other | lineage4.3.4.2.1 | None | SRR10993953 | Other | La1.6 | None | ERR4817102 | Sensitive | lineage1.1.2;lineage4 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6982106 | Sensitive | lineage4.8 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR6982196 | Sensitive | None | SRR6982050 | Other | lineage4.3.4.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR7240324 | Other | La1.8.1 | None | SRR6982075 | Sensitive | lineage4.9 | None | ERR4188010 | Other | La1.8.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982092 | Other | lineage4.3.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR17832798 | Sensitive | lineage3 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR7240398 | Other | La1.8.1 | None | SRR3725586 | Sensitive | lineage4.9 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR16278292 | Other | La1.4 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR3725585 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6981981 | Sensitive | lineage4.3.3 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR10993957 | Other | La1.6 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR1915484 | Other | La1.2.BCG | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR5162118 | Other | La1.8.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR9787099 | Sensitive | lineage6.1.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR1915486 | Other | La1.2.BCG | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101827 | Other | lineage4.3.4.2.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR2515484 | Sensitive | lineage4.8 | None | SRR7240148 | Other | La1.8.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR2101816 | Other | lineage4.8 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6855718 | Other | lineage4.8 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | ERR4188253 | Other | La1.8.1 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982328 | Other | lineage3.1.1 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6982337 | Sensitive | lineage4.7 | None | ERR212082 | Sensitive | lineage4.9.1 | None | SRR6982484 | Other | lineage3.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR7240147 | Other | La1.8.1 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR7240537 | Other | La1.8.1 | None | ERR502497 | Sensitive | lineage4.9 | None | DRR184913 | Sensitive | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR3799543 | Sensitive | lineage6.1.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR3725588 | Sensitive | lineage4.9 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | ERR2179857 | Sensitive | lineage4 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR18391772 | Other | La1.7.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR4769479 | Other | La1.3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786558 | Other | lineage4.3.4.2 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR15522852 | Sensitive | lineage1.1.3.3 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR11871413 | XDR-TB | lineage2.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR2515460 | Other | lineage4.8 | za | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | SRR21764246 | Other | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | ERR9786663 | Other | lineage4.3.4.2 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR6982198 | HR-TB | lineage1 | None |
|---|
