EBG00000313325 - n.1334C>T
Drug resistance types
120 Sensitive
2 RR-TB
14 HR-TB
23 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 29 |
| lineage4.3.3 | 6 |
| lineage4.9 | 20 |
| 6 | |
| lineage2.2.2 | 7 |
| lineage4.3.4.2.1 | 20 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage3.1.1 | 8 |
| lineage4.3.4.2 | 3 |
| lineage4.2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage5.1.1 | 2 |
| lineage4.8 | 5 |
| lineage4.1.2.1 | 6 |
| La1.8.1 | 9 |
| lineage1.1.3.2 | 6 |
| La1.3 | 3 |
| La1 | 1 |
| La1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage6.1.1 | 1 |
| lineage3 | 5 |
| lineage4.3.2.1 | 4 |
| La1.6 | 2 |
| lineage4.1.2 | 8 |
| lineage2.2.1.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage1.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 3 |
| lineage4.5 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9.1 | 2 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4 | 2 |
| lineage1.2.2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | SRR857295 | MDR-TB | lineage4.3.3 | None | SRR7585435 | Other | lineage4.9 | None | ERR323055 | HR-TB | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR4195691 | Sensitive | lineage4.3.3 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR4769482 | Sensitive | La1 | None | ERR4769462 | Other | La1.3 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769561 | Other | La1.3 | None | ERR4772210 | Other | La1.2 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR752033 | Sensitive | lineage2.2.1 | th | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR9786663 | Sensitive | lineage4.3.4.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR7821222 | Sensitive | lineage4.8.1 | None | ERR9121192 | Sensitive | lineage4.3.3 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR124451 | HR-TB | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR13199738 | Other | La1.7.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR13199726 | Other | La1.2 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR17832798 | Other | lineage3 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176771 | Sensitive | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR4815644 | Sensitive | lineage4.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161033 | HR-TB | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR181905 | Sensitive | lineage2.2.1 | mw | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR211997 | Sensitive | lineage3.1.1 | mw | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR221569 | Sensitive | lineage1.2.2.1 | mw | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | SRR3743477 | Pre-XDR-TB | lineage4.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2179850 | Sensitive | lineage4 | None | SRR4033190 | HR-TB | lineage4.9 | None | ERR221550 | Sensitive | lineage4.3.4.2.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR4819125 | Other | lineage2.2.1 | gb | SRR5341460 | Other | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | SRR6045849 | Other | lineage4.4.1.1 | None | ERR4828391 | Sensitive | lineage4.9 | None | ERR2843536 | Other | lineage2.2.1 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR4828450 | Sensitive | lineage1.1.1.1 | vn | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | ERR4831532 | MDR-TB | lineage2.2.2 | None | ERR4972536 | XDR-TB | lineage4.3.2 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR5087606 | Other | La1.8.1 | None | ERR323036 | HR-TB | None | ERR5311076 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5087719 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None |
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