EBG00000313325 - n.1334C>T


Drug resistance types
135 Sensitive 4 RR-TB 7 HR-TB 21 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 79
lineage2.2.1 24
lineage4.5 2
lineage4.3.4.2 3
lineage4.1.2 7
lineage4.3.4.2.1 14
La3;M.canetti;lineage2.1;lineage4.9 2
lineage4.6.2.2 1
lineage1.1.3.2 6
La1.8.1 5
lineage6.1.1 2
lineage4.3.2.1 3
lineage1.2.2.1;lineage4 1
La1.7.1 2
lineage4.1.1.3 3
lineage1.1.2 3
lineage2.2.2 12
lineage4.3.4.1 5
lineage3.1.1 7
lineage3.1.2.1 1
lineage1.1.3.1 1
lineage3 5
lineage4.2.1 3
lineage4.8 5
lineage3.1.1;lineage4.3.2.1 1
La1.6 2
lineage4.6.1.2 1
lineage2.2.2;lineage4.9 1
lineage4.9.1 2
lineage1.1.2;lineage4.3.4.1 1
lineage4.3.3 2
lineage4.1.2.1 5
La1.2 1
lineage4.4.1.2 2
lineage1.2.2.1 2
lineage4.4.1.1.1 1
lineage2.2.1.1 2
lineage1.1.2;lineage4 1
lineage5.1.1 2
lineage1.1.1 2
lineage4.2.2.2 1
lineage4 2
M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2.1.1 1
lineage1.2.1.2.1 1
lineage4.4.1.1 1
La1.3 1
lineage4.3.4.1;lineage4.9 1
lineage4.9;lineage5.1.1 1
spoligotype Counts
spoligotype Count
None 234
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1208756 Other lineage4.9 None
SRR11972283 MDR-TB lineage2.2.1 None
SRR3725599 Sensitive lineage4.9 None
SRR6824550 Sensitive lineage4.5 None
SRR1208925 Other lineage4.9 None
ERR9786663 Other lineage4.3.4.2 None
SRR3725592 Sensitive lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR1209038 Sensitive lineage4.9 None
SRR1202404 Other lineage4.9 None
ERR216950 Sensitive lineage1.1.3.2 None
SRR1792265 Other La1.8.1 None
SRR1182994 Sensitive lineage4.1.2 None
ERR473278 Sensitive lineage4.9 None
SRR1208911 Sensitive lineage4.9 None
SRR1208827 Sensitive lineage4.9 None
SRR12420396 Sensitive lineage2.2.1 None
ERR9787323 Sensitive lineage6.1.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
ERR212100 Sensitive lineage1.2.2.1;lineage4 None
ERR323061 Sensitive lineage4.9 None
SRR1792232 Other La1.7.1 None
SRR1792247 Other La1.7.1 None
SRR1208173 Sensitive lineage4.9 None
SRR1183438 Other lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR1202397 Sensitive lineage4.9 None
SRR1208892 Sensitive lineage4.9 None
ERR176672 Sensitive lineage4.3.4.2.1 None
SRR12882699 Sensitive lineage1.1.2 None
DRR184903 Sensitive lineage2.2.2 None
ERR216930 Sensitive lineage4.3.4.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR181940 Sensitive lineage3.1.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1202656 Sensitive lineage4.9 None
SRR1209022 Other lineage4.9 None
ERR161045 Sensitive lineage4.3.4.2.1 None
ERR1873561 XDR-TB lineage2.2.2 None
ERR190388 Sensitive lineage4.9 None
SRR1180237 Sensitive lineage4.1.2 None
SRR5341462 Pre-XDR-TB lineage3.1.2.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR5341460 Other lineage3 None
SRR1062820 Pre-XDR-TB lineage2.2.1 None
ERR181905 Sensitive lineage2.2.1 mw
SRR1202406 Sensitive lineage4.9 None
SRR3725595 Sensitive lineage4.9 None
ERR2179737 HR-TB lineage4.2.1 None
ERR736879 Sensitive lineage1.1.3.2 None
SRR8346061 RR-TB lineage2.2.1 None
SRR1208553 Other lineage4.9 None
SRR1202735 Sensitive lineage4.9 None
SRR1062851 MDR-TB lineage4.8 None
ERR133816 MDR-TB lineage2.2.1 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1208526 Sensitive lineage4.9 None
ERR245795 Sensitive lineage3.1.1;lineage4.3.2.1 None
SRR10993957 Other La1.6 None
SRR1208682 Other lineage4.9 None
ERR4769537 Sensitive lineage4.9 None
ERR163970 Sensitive lineage4.6.1.2 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR1063847 Sensitive lineage3.1.1 None
ERR126614 Sensitive lineage4.3.4.2.1 None
SRR124452 Sensitive lineage2.2.2;lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR212082 Sensitive lineage4.9.1 None
ERR245810 Sensitive lineage4.9.1 None
ERR036233 Sensitive lineage1.1.2;lineage4.3.4.1 None
ERR3324375 Other lineage1.1.3.2 None
SRR10869017 Pre-XDR-TB lineage4.3.3 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR108476 Sensitive lineage4.1.2.1 None
SRR1208798 Other lineage4.9 None
SRR1208222 Sensitive lineage4.9 None
SRR1208648 Sensitive lineage4.9 None
SRR1208880 Other lineage4.9 None
SRR1208836 Other lineage4.9 None
SRR1238557 Other lineage4.9 None
SRR21737226 Sensitive lineage4.5 None
SRR1208281 Sensitive lineage4.9 None
SRR21240029 Sensitive lineage4.3.3 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
SRR1208759 Sensitive lineage4.9 None
SRR17406750 Other lineage1.1.2 None
SRR3725589 Sensitive lineage4.9 None
SRR1208486 Other lineage4.9 None
ERR1063873 Sensitive lineage4.3.4.2.1 None
SRR7240147 Other La1.8.1 None
SRR1208611 Other lineage4.9 None
ERR4772210 Other La1.2 None
ERR190332 Sensitive lineage4.3.4.1 None
SRR1208476 Other lineage4.9 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR1202713 Sensitive lineage4.9 None
SRR1011488 Sensitive lineage2.2.1 None
SRR3725597 Sensitive lineage4.9 None
SRR1208539 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
SAMN02350409 Pre-XDR-TB lineage2.2.1 None
ERR221569 Sensitive lineage1.2.2.1 mw
SRR6982349 Sensitive lineage2.2.1 None
ERR5311086 Sensitive lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
SRR14801294 MDR-TB lineage2.2.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR6824516 Sensitive lineage2.2.1.1 None
ERR181708 RR-TB lineage1.1.2;lineage4 None
ERR1082134 Sensitive lineage5.1.1 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR6484909 Sensitive lineage2.2.1 None
SRR6981993 Sensitive lineage4.3.2.1 None
ERR9786447 Sensitive lineage4.1.2.1 None
SRR3725588 Sensitive lineage4.9 None
ERR736805 Sensitive lineage2.2.1 None
SRR3725596 Sensitive lineage4.9 None
SRR1202414 Sensitive lineage4.9 None
ERR161201 Sensitive lineage1.1.3.2 None
SRR1208277 Other lineage4.9 None
SRR17832798 Sensitive lineage3 None
ERR779662 Sensitive lineage3.1.1 None
SRR1208721 Other lineage4.9 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
SRR5341430 Other lineage3 None
SRR11972390 MDR-TB lineage2.2.1 None
ERR212003 Sensitive lineage4.3.4.2.1 None
SRR7240148 Other La1.8.1 None
SRR1209004 Sensitive lineage4.9 None
ERR736808 Sensitive lineage2.2.1 None
SRR1202384 Other lineage4.9 None
SRR4034393 MDR-TB lineage4.1.2.1 None
ERR108424 Sensitive lineage4.8 None
SRR1208694 Sensitive lineage4.9 None
SRR3725591 Sensitive lineage4.9 None
SRR3725587 Sensitive lineage4.9 None
SRR1182954 Other lineage4.9 None
ERR176780 Sensitive lineage4.9 None
SRR1208196 Sensitive lineage4.9 None
ERR987719 HR-TB lineage3 None
SRR7645800 MDR-TB lineage2.2.1 None
ERR718268 Sensitive lineage1.1.1 None
SRR3725590 Sensitive lineage4.9 None
SRR1011480 MDR-TB lineage4.8 None
ERR6397161 Other lineage4.2.2.2 None
ERR2179850 Sensitive lineage4 None
SRR1202702 Other lineage4.9 None
ERR9786558 Other lineage4.3.4.2 None
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR9786258 Sensitive lineage4.3.4.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR216949 Sensitive lineage4.3.4.1 None
SRR3743477 Pre-XDR-TB lineage4.2.1 None
ERR161170 Sensitive lineage4.3.4.1 None
SRR22175227 HR-TB lineage3 None
ERR502480 Other lineage5.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
ERR5087606 Other La1.8.1 None
ERR3804154 Sensitive lineage4.1.2.1 None
SRR124453 HR-TB lineage2.2.2 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
ERR176739 Sensitive lineage4.4.1.1 None
ERR4769462 Other La1.3 None
ERR245662 Sensitive lineage1.2.2.1 None
SRR1209015 Sensitive lineage4.9 None
SRR1181592 Other lineage4.9 None
SRR10869302 MDR-TB lineage4.3.2.1 None
ERR1873461 Pre-XDR-TB lineage2.2.2 None
ERR176517 Sensitive lineage1.1.3.2 None
ERR1203071 Sensitive lineage4.8 None
SRR1208536 Other lineage4.9 None
SRR12199468 Sensitive lineage4.9 None
SRR11972378 MDR-TB lineage1.1.2 None
SRR1202708 Other lineage4.9 None
ERR779661 Sensitive lineage4.3.4.2.1 None
ERR323048 Sensitive lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR124451 Sensitive lineage2.2.2 None
ERR1873437 HR-TB lineage2.2.2 None
SRR10993953 Other La1.6 None
ERR161173 Sensitive lineage4.3.4.2.1 None
ERR163988 Sensitive lineage4.1.2 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR245740 Sensitive lineage4.1.2 None
SRR1208588 Other lineage4.9 None
SRR1208891 Other lineage4.9 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
ERR473304 Sensitive lineage2.2.1 None
ERR1023250 Sensitive lineage6.1.1 None
ERR1873476 Pre-XDR-TB lineage2.2.2 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
SRR1202728 Other lineage4.9 None
SRR3725586 Sensitive lineage4.9 None
SRR1208562 Other lineage4.9 None
ERR1873463 MDR-TB lineage2.2.2 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
ERR176450 Sensitive lineage4.1.1.3 None
ERR245764 HR-TB lineage3.1.1 None
SRR1202706 Other lineage4.9 None
SRR1202714 Sensitive lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR161125 Sensitive lineage4 None
SRR3725594 Sensitive lineage4.9 None
SRR4033203 Sensitive lineage4.9 None
ERR212042 HR-TB lineage3.1.1 None
SRR1062859 Sensitive lineage2.2.1 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR181750 Sensitive lineage1.1.3.2 None
SRR3725585 Sensitive lineage4.9 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR5758436 Other lineage2.2.2 None
SRR6789621 Other lineage4.9 None
ERR181749 Sensitive lineage4.3.4.2.1 None
ERR323068 Sensitive lineage4.9 None
ERR751729 Other lineage1.1.1 None
ERR161150 Sensitive lineage4.3.4.2.1 None
SAMN02350437 MDR-TB lineage4.8 None
SRR1182900 Sensitive lineage4.9 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR4188213 Other La1.8.1 None
ERR10762317 Pre-XDR-TB lineage4.2.1 None
SRR3725593 Sensitive lineage4.9 None
SRR6397389 Sensitive lineage4.1.2.1 None