EBG00000313325 - n.699_700delCAinsAT
Drug resistance types
11 Sensitive
2 RR-TB
9 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
184 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 23 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.5 | 2 |
| lineage4.9 | 17 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.2.1 | 4 |
| lineage3 | 18 |
| lineage2.2.1 | 19 |
| lineage4.3.4.1 | 3 |
| lineage6.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1 | 23 |
| La1.3;lineage1.2.2.2 | 2 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 4 |
| lineage1.1.2 | 7 |
| lineage4.6 | 1 |
| lineage1.1.3 | 3 |
| lineage4.6.1.1 | 1 |
| La1.8.1 | 8 |
| lineage1.2.2.2 | 4 |
| lineage4 | 2 |
| lineage4.2.2 | 2 |
| La3 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.6.2.2 | 6 |
| lineage3.1.2 | 2 |
| lineage4.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3 | 3 |
| lineage2.2.1.1 | 5 |
| lineage1.2.1.2.1 | 5 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8.2 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1.4 | 1 |
| La1.6 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045599 | Other | lineage4.8 | None | SRR7645808 | HR-TB | lineage4.2.1;lineage4.8 | None | ERR4815425 | Other | lineage4.5 | gb | ERR4815472 | Other | lineage4.9 | gb | ERR4820652 | Other | lineage1.1.1 | gb | ERR4821417 | Other | lineage1.1.3.1 | None | ERR2513231 | Sensitive | lineage4.3.4.2 | None | SAMN02628479 | MDR-TB | lineage4.2.1 | ir | ERR4817435 | Other | lineage1.1.3.1 | None | SRR6045178 | Other | lineage3 | None | ERR4814804 | Other | lineage2.2.1 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR4816828 | Other | lineage1.1.1 | gb | ERR4816971 | HR-TB | lineage4.3.4.1 | None | ERR4818787 | Other | lineage6.1.2 | None | ERR2229358 | Other | lineage4.8 | None | SRR13199746 | Other | La1.7.1 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR6045164 | Other | lineage4.1.2.1 | None | ERR4819217 | Other | La1.3;lineage1.2.2.2 | None | ERR4819377 | Other | lineage3.1.2.1;lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1184383 | Other | lineage4.9 | None | ERR2513924 | Sensitive | lineage4.8 | None | SRR2101628 | Other | lineage4.3.2.1 | None | ERR4817987 | Other | lineage4.7 | None | ERR4821791 | Other | lineage4.1.2.1 | None | ERR4815407 | Other | lineage1.1.2 | gb | ERR4817822 | Other | lineage4.6 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR987733 | Other | lineage4.6.1.1 | None | SRR1791921 | Other | La1.8.1 | None | SRR1049031 | Sensitive | lineage4.9 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4814312 | Other | lineage4 | None | ERR4815169 | Other | lineage4.8 | gb | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4819576 | Other | lineage4.2.2 | gb | ERR4820543 | Other | La3 | None | SRR1169017 | Other | lineage2.2.1 | None | SRR1791908 | Other | La1.8.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4818179 | Other | lineage4.1.1.1 | None | SRR7236372 | Other | La1.8.1 | None | ERR4816353 | Sensitive | lineage2.2.1 | gb | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4817046 | Other | lineage3 | None | ERR4820614 | Other | lineage3.1.2 | None | ERR4815172 | Other | La1.3;lineage1.2.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR4821409 | Other | lineage4.8 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4819131 | Other | lineage4.8 | None | ERR4820880 | Other | lineage4.2.2.2 | gb | ERR4816610 | Other | lineage4.3.3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | ERR4815534 | Other | lineage4.9 | None | ERR4816134 | Other | lineage1.2.1.2.1 | gb | ERR4817874 | Other | lineage3 | None | SRR7240449 | Other | La1.8.1 | None | SRR7069954 | Other | lineage1.2.2.2 | None | SRR7070461 | Other | lineage3 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR4819734 | RR-TB | lineage3 | gb | ERR4820679 | Other | lineage4.8 | None | ERR4822021 | Other | lineage4.8 | gb | SRR3675491 | Other | lineage4.7 | None | ERR4819206 | Other | lineage4.8 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4818232 | Other | lineage4.1.2 | gb | ERR4821899 | Other | lineage4.1 | None | SAMN02419540 | Other | lineage2.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4821891 | Other | lineage4.8 | None | ERR4817508 | Other | lineage4.1.2.1 | gb | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR13861530 | Other | lineage4.9 | None | ERR2228859 | Other | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4817175 | Other | lineage4.8 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4817765 | Other | lineage1.2.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818752 | Other | lineage3 | None | ERR4816969 | Other | lineage4.8 | None | ERR4817941 | Other | lineage4.8 | gb | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR7240448 | Other | La1.8.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | ERR4814329 | Other | lineage4.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816756 | Other | lineage2.2.1;lineage4 | None | ERR4822224 | Other | lineage4.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR7069722 | Other | lineage4.1.2.1 | None | SRR7240070 | Other | La1.8.1 | None | SRR13591410 | Other | lineage4.9 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4821325 | Other | lineage3 | None | ERR4817948 | Other | lineage3 | gb | SRR7240069 | Other | La1.8.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR4816968 | Other | lineage4.2.1 | gb | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | SRR5341375 | Other | lineage4.9 | None | SRR6045036 | Other | lineage4.9 | None | SRR7068941 | Other | lineage4.8.2 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4820290 | Other | lineage3 | None | ERR4817703 | Other | lineage1.1.1.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4817463 | Other | La3 | gb | SRR1792140 | Other | La1.8.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR7068984 | Other | lineage4.8 | None | SRR7070383 | Other | lineage4.1.2.1 | None | SRR1196582 | Other | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1173384 | Other | lineage4.9 | None | ERR4818926 | HR-TB | lineage4.6.2.2 | gb | ERR4814801 | Sensitive | lineage4.8 | gb | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR4816627 | Sensitive | lineage2.2.2 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814714 | Other | lineage3 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4819683 | Other | lineage4.1.4 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR4820188 | Other | lineage3 | gb | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4821610 | Other | lineage4.3.2 | None | SRR6982140 | Other | lineage2.2.1.1 | None | SRR18911138 | Other | lineage3 | None | SRR1183080 | Other | lineage4.9 | None | SRR5341417 | HR-TB | lineage3 | None | ERR4816397 | Other | lineage1.1.2 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR4821773 | Other | La1.6 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR7069959 | Other | lineage4.5 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4820666 | Other | lineage4.8 | gb | ERR4814775 | Other | lineage1.1.2 | None | ERR4820161 | Other | lineage3 | None | ERR4815584 | Other | lineage4.3.4.2.1 | gb | ERR4817070 | Other | lineage1.1.2 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820746 | Other | lineage3 | None | ERR4820761 | Other | lineage4.3.4.2 | None | ERR10796592 | Other | lineage4.9 | None | SRR6045064 | Other | lineage4.3.1.1 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4821530 | Other | lineage4.3.4.1 | None | SRR6856094 | Other | lineage2.2.1 | None | ERR4814783 | Other | lineage4.7 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4818008 | Other | lineage4.3.3 | None | SRR21728339 | Other | lineage3 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR6044774 | Other | lineage3 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6389899 | Other | lineage4.1.2 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815427 | HR-TB | lineage3.1 | gb | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR21675949 | Other | lineage4.3.3 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | ERR4817452 | Other | lineage4.8 | None |
|---|
