EBG00000313325 - n.1327T>C


Drug resistance types
114 Sensitive 14 RR-TB 17 HR-TB 29 MDR-TB 20 Pre-XDR-TB 0 XDR-TB 135 Other
lineage Counts
lineage Count
lineage4.1.2.1 9
lineage4.1.1.3 9
lineage1.1.2 3
lineage4.9 48
lineage4.8 21
lineage3 4
lineage4 8
lineage3.1.2.1 2
lineage2.2.1 47
lineage4.3.4.2.1 15
lineage4.3.2.1 15
lineage4.3.3 16
lineage4.4.1.1.1 4
lineage5.1.1 1
lineage5.1.4 1
lineage4.1.2 7
La1.8.1 13
La1.2 5
lineage1.1.3.2 4
lineage4;lineage3 1
lineage1.1.1 2
lineage3.1.2 2
lineage4.6.2.2 2
lineage4.2.1.1 2
6
lineage4.4.1.1 10
lineage4.7 3
lineage4.1.1.2 1
lineage2.2 4
lineage4.4 1
lineage4.1.1 8
lineage1 1
lineage2.2.2 4
lineage3.1.1 4
lineage4;lineage2.2.1 1
lineage4.1.2;lineage3.1 2
lineage4.3.4.1 3
lineage4.3 1
lineage4.3.4.2 3
La1.2.BCG 1
lineage4.2.1 1
La1.8.2 1
lineage4.6.1.2 3
lineage3.1.2.2 1
lineage4.1.4 1
lineage4.9;La1.8 1
La1.3 2
lineage1.1.1.1 1
lineage4.6.1.1 1
lineage4.9;lineage2.2.1 2
La1.6 2
lineage4.6.1;lineage3.1.1 1
lineage4.6.1 3
lineage1.2.1.2.1 1
lineage2.2.1.1 3
La1.7.1 3
lineage4.9;lineage4.3.4.1 1
La1.4 1
lineage4.9.1 1
lineage4.5 1
lineage1.1.3 1
lineage1.2.2.2 1
lineage4.6.4 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 329
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5007155 HR-TB lineage4.1.2.1 None
SAMN02403545 Pre-XDR-TB lineage4.1.1.3 None
ERR2446433 Other lineage4.1.2.1 None
SRR5341390 HR-TB lineage1.1.2 None
SRR5341375 Other lineage4.9 None
SRR5341423 Other lineage1.1.2 None
ERR2515484 Other lineage4.8 None
SRR5341417 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
SRR5341407 Pre-XDR-TB lineage3.1.2.1 None
ERR2514137 Pre-XDR-TB lineage2.2.1 None
SRR5341425 Other lineage4 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
SRR2101651 Sensitive lineage4.3.2.1 None
SRR2101636 Other lineage4.3.2.1 None
ERR2515854 Sensitive lineage2.2.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR2101662 Sensitive lineage4.3.3 None
SRR2101659 Other lineage4.4.1.1.1 None
ERR2515148 Sensitive lineage4.3.3 None
SRR5341312 Pre-XDR-TB lineage2.2.1 None
ERR702399 Sensitive lineage5.1.1 gh
ERR2693238 HR-TB lineage4.9 None
ERR502513 Sensitive lineage5.1.4 gh
ERR108444 Other lineage4.1.2 ru
ERR2747678 Other La1.8.1 None
SRR5486086 Other La1.2 None
ERR2660524 HR-TB lineage1.1.3.2 None
ERR2747617 Other La1.8.1 None
SRR6045036 Other lineage4;lineage3 None
ERR2747685 Other La1.8.1 None
ERR4821368 Other lineage1.1.1 None
SRR6045683 Other lineage3.1.2 None
SRR6044830 Other lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
SRR6046015 Other lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6397638 Other lineage4.2.1.1 None
SRR6153036 Other None
SRR6153042 Other lineage4.4.1.1 None
SRR6982078 Sensitive None
SRR6045992 Other lineage3 None
ERR2851371 Other lineage4.9 None
SRR6389899 Other lineage4.1.2 None
SRR6152979 Other lineage4.7 None
ERR502483 Sensitive lineage4.9 None
ERR502482 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR6856087 Sensitive lineage4 None
ERR502497 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR6982092 Other lineage4.3.2.1 None
SRR6856094 Other lineage2.2.1 None
SRR6982088 Other lineage4.1.1.2 None
SRR6982102 Other lineage2.2.1 None
SRR6982100 Sensitive lineage4.4.1.1.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982139 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6982106 Sensitive lineage4.8 None
SRR6982140 Other lineage2.2 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6785282 Other lineage4.3.3 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982419 Other lineage4.8 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982196 Sensitive None
SRR6982195 RR-TB lineage4.4 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982194 Other lineage2.2.1 None
SRR6982198 HR-TB lineage1 None
SRR6982494 Other lineage2.2.2 None
SRR6982227 Other lineage4.1.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982362 Other lineage4.3.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6981966 Other lineage2.2.1 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6981981 Other lineage4.3.3 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6982386 Sensitive lineage4.3.2.1 None
SRR6982014 Other lineage4.1.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982011 Other lineage4.1.1 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6855917 Other lineage4.8 None
SRR6855915 Sensitive lineage4.9 None
SRR6982394 Sensitive lineage4.3.2.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982056 Sensitive lineage4.3.4.2.1 None
SRR6982075 Sensitive lineage3 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982405 Sensitive None
SRR6982076 Sensitive lineage4.9 None
ERR5162118 Other La1.8.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
ERR5162133 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982558 Other lineage4.3.4.2 None
DRR184644 HR-TB lineage2.2.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR7645834 Other lineage2.2.1 None
SRR8886989 Other La1.2.BCG None
SRR9971296 MDR-TB lineage4.8 None
SRR7645827 Other lineage4.2.1.1 None
SRR7645900 Sensitive lineage4.8 None
SRR7755643 Pre-XDR-TB lineage4.2.1 None
SRR7851307 Other La1.8.2 None
ERR036194 Other lineage4.6.1.2 None
ERR024351 MDR-TB lineage2.2.1 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR037234 Sensitive lineage4.9 None
ERR1144990 Other lineage4.8 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR036215 Other lineage4.8 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR1023527 RR-TB lineage4 None
ERR1034722 Other lineage4.9 None
ERR1144989 Sensitive lineage4.8 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324354 Sensitive lineage4.8 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3806453 Other lineage4.3.4.2 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR4188010 Other La1.8.1 None
ERR4132447 HR-TB lineage4 None
ERR4188253 Other La1.8.1 None
ERR4188215 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4627379 Other La1.8.1 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR4627392 Other La1.8.1 None
ERR5863930 Pre-XDR-TB lineage2.2.1 None
ERR473337 Other lineage4.1.2 None
ERR4769424 Sensitive lineage4.9 None
ERR4769429 Other lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769527 Sensitive lineage4.9 None
ERR2515460 Sensitive lineage4.8 za
ERR2515916 Sensitive lineage4.3.4.2.1 za
ERR5863929 Pre-XDR-TB lineage2.2.1 None
ERR4769419 Other lineage4.9 None
ERR4769479 Other La1.3 None
ERR4769507 Sensitive lineage4.9 None
ERR5865343 MDR-TB lineage2.2.1 None
ERR5864889 MDR-TB lineage2.2.1 None
ERR5864927 MDR-TB lineage2.2.1 None
ERR6338288 Other La1.2 None
ERR5987219 Pre-XDR-TB lineage2.2.2 None
ERR6201802 Other La1.2 None
ERR6197036 Other lineage4 None
ERR6198389 Other La1.2 None
ERR751865 Other lineage1.1.1 None
ERR736816 Other lineage4.9 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
ERR8025347 Sensitive lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR037513 Sensitive lineage4.3.4.2.1 None
ERR8665607 Pre-XDR-TB lineage2.2.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9786844 Other lineage4.3.4.2 None
ERR987704 HR-TB lineage4.6.1.2 None
ERR9117681 Other lineage4.3.3 None
ERR9117714 Other lineage3.1.2 None
SRR1013528 Pre-XDR-TB lineage2.2 None
ERR987757 MDR-TB lineage4.6.1.2 None
SRR1013531 MDR-TB lineage4.9 None
SRR1013527 RR-TB lineage2.2 None
SRR1106670 Other lineage4.9 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR10869241 Pre-XDR-TB lineage2.2.1 None
SRR10993953 Other La1.6 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR10993956 Other La1.6 None
SRR1183080 RR-TB lineage4.9 None
SRR11342635 MDR-TB lineage4.8 None
SRR1141261 MDR-TB lineage4.9 None
SRR1159158 Other lineage2.2.1 None
SRR1162501 Other lineage2.2.1 None
SRR1172282 Other lineage4.9 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173717 MDR-TB lineage4.6.1 None
SRR1173799 MDR-TB lineage3.1.1 None
SRR1180252 Other lineage4.9 None
SRR1169167 Pre-XDR-TB lineage4.1.1.3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR1172306 Pre-XDR-TB lineage4.1.1.3 None
SRR1172808 Other lineage4.9 None
SRR1173025 Other lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR1180982 Other lineage2.2.1 None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR1183958 Other lineage2.2.1 None
SRR12882020 Other lineage3.1.1 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR11972311 Pre-XDR-TB None
SRR11972420 MDR-TB lineage2.2.1 None
SRR1196582 Other lineage4.9 None
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
SRR13199746 Other La1.7.1 None
SRR12882631 Other lineage3.1.2.1 None
SRR13199734 Other La1.2 None
SRR13591410 Other lineage4.9;lineage4.3.4.1 None
SRR13861727 Other lineage4.9 None
SRR18391772 Other La1.7.1 None
SRR16278292 Other La1.4 None
SRR1791899 HR-TB La1.8.1 None
SRR1792140 Other La1.8.1 None
SRR18213909 Other lineage4.1.2.1 None
SRR18391683 Other La1.7.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR18911000 Sensitive lineage2.2.1 None
SRR19612366 Other lineage4.5 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101666 Sensitive lineage4.8 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101643 Other lineage2.2.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101681 Sensitive lineage4.8 None
SRR2101691 Other lineage2.2.1 None
SRR2101685 Sensitive lineage4.9 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101816 Other lineage4.8 None
SRR2101803 Sensitive lineage4.3.3 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR21277822 Sensitive lineage2.2.1.1 None
SRR21240064 Sensitive lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21675949 Other lineage4.3.3 None
SRR21711124 Other lineage1.1.3 None
SRR21676318 Sensitive lineage2.2.1 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21714038 Sensitive lineage4.3.3 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR21728339 Other lineage3 None
SAMN02419540 Other lineage2.2.1 None
SRR3105736 Other lineage1.2.2.2 None
ERR4815795 Other lineage1.1.2 None
SRR3675460 Sensitive lineage4.1.1.3 None
ERR4814623 Other lineage4.8 None
SAMN02567676 MDR-TB lineage4.6.1 None
ERR1679641 Other lineage4.6.4 None
ERR4816101 Other lineage4.1.2.1 None
ERR2179857 RR-TB lineage4 None
ERR4815040 Other lineage4.2.2.2 None
ERR176820 Sensitive lineage4.3.4.2.1 mw
ERR2229780 Other lineage4.9 None
ERR2229332 RR-TB lineage4.8 None
ERR176640 Sensitive lineage4.3.4.2.1 mw
ERR4817102 Sensitive None
ERR2229358 Other lineage4.8 None
ERR2228873 Other lineage4.8 None
ERR2228822 Other lineage4.9 None
ERR2228859 RR-TB lineage4 None
ERR4818188 Other lineage4.1.2.1 None
ERR2228888 Other lineage4.8 None
SRR4034769 Other lineage4.1.1 None