EBG00000313325 - n.1113A>T
Drug resistance types
221 Sensitive
9 RR-TB
14 HR-TB
43 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 142 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.3.3 | 8 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.2.1 | 5 |
| lineage2.2.1 | 53 |
| lineage2.2.2 | 1 |
| lineage3 | 16 |
| lineage4.2.2 | 4 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.6.3 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.4.1.1 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.1 | 6 |
| La1.8.1;lineage4.9 | 4 |
| La1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.1.1.1 | 4 |
| lineage4.4.2;lineage4.5 | 1 |
| lineage4.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.2 | 5 |
| La1.4 | 1 |
| lineage1.1.2 | 15 |
| lineage4.1.2.1 | 7 |
| La1.7.1 | 2 |
| La1.8.1 | 11 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 7 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8 | 5 |
| lineage1.2.1.2.1 | 3 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 6 |
| La1.8.2 | 2 |
| lineage3.1;lineage4 | 1 |
| lineage1.1.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4 | 3 |
| La1.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| La3;lineage4 | 1 |
| lineage6.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage5.1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 358 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861722 | Sensitive | lineage4.9 | None | SRR13861729 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR9786558 | Other | lineage4.3.4.2 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR10305656 | Other | lineage2.2.1 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR6359073 | Sensitive | lineage4.9 | None | SRR1173367 | MDR-TB | lineage3 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR7443722 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR5341346 | Sensitive | lineage3 | None | SRR15315833 | Sensitive | lineage4.9 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR400350 | Sensitive | lineage4.9 | None | SRR13861543 | Sensitive | lineage4.9 | None | SRR13861547 | Sensitive | lineage4.9 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | SRR1183716 | Other | lineage4.9 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4188218 | Sensitive | lineage4.9 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR13861148 | Other | lineage4.9 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR7069319 | Other | lineage4.5 | None | ERR4188158 | Sensitive | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR7069638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR13861571 | Sensitive | lineage4.9 | None | SRR13861629 | Sensitive | lineage4.9 | None | SRR14802194 | Sensitive | lineage4.3.3 | None | SRR16156814 | Sensitive | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR14781861 | MDR-TB | lineage4.2.1 | None | ERR3468789 | Sensitive | lineage4.9 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR15315871 | Sensitive | lineage4.9 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR5979815 | Sensitive | lineage4.9 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR2515226 | Sensitive | lineage2.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR6824440 | Sensitive | lineage4.4.2;lineage4.5 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR5979808 | Other | lineage4.9 | None | SRR10869138 | Sensitive | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | ERR5979784 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR16278292 | Other | La1.4 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173445 | Sensitive | lineage3 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599071 | Sensitive | lineage3 | None | SRR13861443 | Other | lineage4.9 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR1792232 | Other | La1.7.1 | None | SRR13861218 | Sensitive | lineage4.9 | None | SRR13861408 | Sensitive | lineage4.9 | None | SRR13861561 | Sensitive | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR6197032 | Other | lineage4.9 | None | SRR13861275 | Other | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | ERR5979791 | Sensitive | lineage4.9 | None | SRR11349141 | MDR-TB | lineage4.1.1.3 | None | ERR2843536 | Sensitive | lineage2.2.1 | None | SRR13861140 | HR-TB | lineage4.9 | None | ERR6197038 | Sensitive | lineage4.9 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR13861177 | Other | lineage4.9 | None | ERR3283035 | Sensitive | lineage4.9 | None | SRR13861169 | Sensitive | lineage4.9 | None | SRR13861563 | Sensitive | lineage4.9 | None | SRR13861469 | Sensitive | lineage4.9 | None | SRR13861365 | Sensitive | lineage4.9 | None | ERR987719 | HR-TB | lineage3 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR6982272 | Sensitive | lineage4.9 | None | ERR6197030 | Sensitive | lineage4.9 | None | SRR11348178 | Sensitive | lineage1.1.2 | None | SRR13861437 | Sensitive | lineage4.9 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR13861409 | HR-TB | lineage4.9 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | ERR3439294 | Sensitive | lineage4.9 | None | SAMN02599074 | Other | lineage1.2.1.2.1 | None | SRR13861287 | Sensitive | lineage4.9 | None | ERR4828764 | Sensitive | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4024562 | Sensitive | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR13861199 | Sensitive | lineage4.9 | None | SRR13861203 | Sensitive | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | ERR4799131 | HR-TB | lineage2.2.1 | in | SRR12420294 | MDR-TB | lineage2.2.1 | None | ERR6149874 | Other | La1.8.2 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | ERR6866046 | Sensitive | lineage4.1.1.3 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR1172293 | Sensitive | lineage1.1.2 | None | SRR13861615 | Sensitive | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR1169574 | Sensitive | lineage1.1.2 | None | ERR4814573 | Other | lineage1.1.3.2 | None | SRR13861580 | Other | lineage4.9 | None | ERR9119892 | MDR-TB | lineage2.2.1.1 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR10808722 | Sensitive | lineage4.8 | None | SRR1180294 | Sensitive | lineage1.1.2 | None | SRR13861506 | RR-TB | lineage4.9 | None | ERR9891984 | Other | lineage6.3.1 | None | SRR7443769 | Sensitive | lineage4 | None | ERR6197022 | Other | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR13861475 | Sensitive | lineage4.9 | None | SRR1175053 | Other | lineage1.2.1.2.1 | None | SRR1180487 | Sensitive | lineage1.1.2 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | ERR5311093 | Other | La1.8.1 | None | SRR13861425 | Other | lineage4.9 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR6789621 | Other | lineage4.9 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | ERR4187800 | Sensitive | La1.8.1 | None | SRR2101816 | Other | lineage4.8 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR4188035 | Other | La1.8.1 | None | SRR13861474 | Sensitive | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6197026 | Other | lineage4.9 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR3283042 | Other | lineage4.9 | None | SRR11348198 | Sensitive | lineage1.1.2 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR13861222 | Sensitive | lineage4.9 | None | SRR13861588 | Other | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR12420692 | MDR-TB | lineage2.2.1 | None | SRR13861599 | Other | lineage4.9 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR5311095 | Other | La1.8.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR1792247 | Other | La1.7.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR4799636 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810941 | MDR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR4797141 | Sensitive | lineage3 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR6896576 | Sensitive | lineage2.2.1 | None | SRR13861713 | Other | lineage4.9 | None | SRR13861368 | Sensitive | lineage4.9 | None | ERR751414 | MDR-TB | lineage4 | None | SRR13861439 | Sensitive | lineage4.9 | None | SRR13861605 | Sensitive | lineage4.9 | None | SRR13861472 | Other | lineage4.9 | None | ERR036200 | Sensitive | lineage4.1.2 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR13861458 | MDR-TB | lineage4.9 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SRR13861316 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR13861603 | Sensitive | lineage4.9 | None | SRR19303791 | Sensitive | lineage5.1.3 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | ERR5311085 | Other | La1.8.1 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR6197034 | Sensitive | lineage4.9 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR13861194 | Sensitive | lineage4.9 | None | SRR13861590 | Sensitive | lineage4.9 | None | SRR1172322 | Sensitive | lineage1.1.2 | None | ERR4187952 | Other | La1.8.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | SAMN02599130 | MDR-TB | lineage3 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR5987400 | MDR-TB | lineage2.2.1.1 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR7443761 | Sensitive | lineage4.9 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861560 | Other | lineage4.9 | None | SRR13861620 | Sensitive | lineage4.9 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR13861262 | Other | lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR13861346 | Sensitive | lineage4.9 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR3283043 | Other | lineage4.9 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | ERR6197028 | Sensitive | lineage4.9 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR6982419 | Other | lineage4.8 | None | ERR405194 | Sensitive | lineage4.1.2.1 | None | SRR13861170 | Other | lineage4.9 | None | SRR13861178 | Sensitive | lineage4.9 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | ERR4828772 | HR-TB | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR14179701 | Sensitive | lineage4.1.2.1 | None | SRR13861276 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR13861492 | Sensitive | lineage4.9 | None | ERR3283053 | Sensitive | lineage4.9 | None | SRR7069258 | HR-TB | lineage3 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR13861138 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | SRR13861165 | HR-TB | lineage4.9 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR11348155 | Sensitive | lineage1.1.2 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR13861216 | Sensitive | lineage4.9 | None | SRR13861233 | Sensitive | lineage4.9 | None | SRR13861501 | Sensitive | lineage4.9 | None | SRR13861524 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR13861520 | Other | lineage4.9 | None | SRR7443747 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | SRR13861151 | Sensitive | lineage4.9 | None | SRR13861277 | Sensitive | lineage4.9 | None | SRR1183306 | Other | lineage4.9 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | SRR7443724 | Sensitive | lineage4.9 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR13861320 | Sensitive | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR13861548 | Sensitive | lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR13861292 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR7443768 | Sensitive | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR13861484 | Sensitive | lineage4.9 | None | SRR5065556 | Sensitive | lineage2.2.1 | vn | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SRR13861197 | Sensitive | lineage4.9 | None | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | SRR13861456 | Sensitive | lineage4.9 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR13861460 | Sensitive | lineage4.9 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR13861488 | Sensitive | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR7443725 | Sensitive | lineage4.9 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR13861585 | Other | lineage4.9 | None | SRR1172874 | Sensitive | lineage2.2.1 | None | SRR1172938 | MDR-TB | lineage3 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR13861451 | Sensitive | lineage4.9 | None | SRR6824398 | Sensitive | lineage2.2.1 | cn | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR12420668 | MDR-TB | lineage2.2.1 | None | ERR4188072 | Sensitive | lineage4.9 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | ERR161125 | Sensitive | lineage4 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR13861737 | Other | lineage4.9 | None | SRR13861549 | Other | lineage4.9 | None | SRR13861736 | Sensitive | lineage4.9 | None | SRR13861154 | Sensitive | lineage4.9 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR7069013 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR13861386 | HR-TB | lineage4.9 | None | ERR4188099 | Other | La1.8.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None |
|---|
