EBG00000313325 - n.1316A>C
Drug resistance types
158 Sensitive
4 RR-TB
16 HR-TB
25 MDR-TB
19 Pre-XDR-TB
2 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 3 |
| lineage2.2.1 | 34 |
| lineage4.9 | 68 |
| La1.8.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 6 |
| lineage1.1.3.2 | 8 |
| lineage3 | 5 |
| lineage4.3.3 | 11 |
| lineage1.1 | 1 |
| lineage4.3.4.2.1 | 17 |
| lineage6.1.3 | 1 |
| lineage3.1.1 | 7 |
| lineage2.2.2 | 10 |
| lineage4.5 | 3 |
| La1.3 | 2 |
| lineage4.3.4.2 | 4 |
| lineage4.6.1.2 | 3 |
| lineage4.1.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 14 |
| lineage4.3.4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.3.2.1 | 7 |
| lineage4.1.2 | 11 |
| lineage1.1.2 | 4 |
| lineage1.2.2.2 | 5 |
| La1.7.1 | 2 |
| lineage5.1.1 | 2 |
| La1.8.1 | 6 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.1.4 | 1 |
| lineage6.1.1 | 2 |
| lineage1.2.2.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4 | 2 |
| lineage1.1.3.1 | 3 |
| lineage1.2.1.2.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| La1.6 | 2 |
| lineage4.1.1.3 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.9.1 | 2 |
| lineage1.2.2.1;lineage4 | 2 |
| lineage1.1.1 | 2 |
| La1.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1.2;lineage4 | 2 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 295 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3743477 | Pre-XDR-TB | lineage4.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR22175227 | HR-TB | lineage3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR3725592 | Sensitive | lineage4.9 | None | SRR3725599 | Sensitive | lineage4.9 | None | SRR3725593 | Sensitive | lineage4.9 | None | ERR775800 | Sensitive | lineage1.1 | th | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4769479 | Other | La1.3 | None | ERR9786663 | Other | lineage4.3.4.2 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | SRR4034769 | Other | lineage4.1.1.1 | None | SRR3725597 | Sensitive | lineage4.9 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR1208476 | Other | lineage4.9 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR473278 | Sensitive | lineage4.9 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR6789621 | Other | lineage4.9 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR779662 | Sensitive | lineage3.1.1 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR161113 | Other | lineage4.8 | mw | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR1208526 | Sensitive | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR1792232 | Other | La1.7.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR7236369 | Other | La1.8.1 | None | SRR1184379 | Other | lineage2.2.2;lineage4.9 | None | SRR11342683 | Other | lineage4.1.2 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR12006068 | Sensitive | lineage4.9 | None | SRR3725587 | Sensitive | lineage4.9 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR17832798 | Sensitive | lineage3 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | ERR221569 | Sensitive | lineage1.2.2.1 | mw | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR736808 | Sensitive | lineage2.2.1 | None | SRR1208892 | Sensitive | lineage4.9 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR3725591 | Sensitive | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1182954 | Other | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR4819206 | Other | lineage4.8 | None | SRR1202706 | Other | lineage4.9 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR2179850 | Sensitive | lineage4 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR1208891 | Other | lineage4.9 | None | SRR7240148 | Other | La1.8.1 | None | SRR3725585 | Sensitive | lineage4.9 | None | ERR4820107 | Other | lineage1.2.1.2.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR10993957 | Other | La1.6 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR3725588 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR1209038 | Sensitive | lineage4.9 | None | ERR1144989 | Sensitive | lineage4.8 | None | SRR10993953 | Other | La1.6 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR1181358 | Other | lineage4.9 | None | SRR1173521 | Other | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR1183438 | Other | lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | SRR12006090 | Sensitive | lineage4.9 | None | SRR1208682 | Other | lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR4821530 | Other | lineage4.3.4.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR7240147 | Other | La1.8.1 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR1181589 | Other | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR1202713 | Sensitive | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR3725586 | Sensitive | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR181905 | Sensitive | lineage2.2.1 | mw | SRR3725595 | Sensitive | lineage4.9 | None | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR8346061 | RR-TB | lineage2.2.1 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR12006091 | Sensitive | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR12006056 | Sensitive | lineage4.9 | None | SRR1019127 | Other | lineage4.9 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | ERR212112 | Sensitive | lineage1.2.2.1;lineage4 | None | SRR6982419 | Other | lineage4.8 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR751729 | Other | lineage1.1.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR212015 | Sensitive | lineage4.8 | None | SRR12006070 | Sensitive | lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR1208539 | Sensitive | lineage4.9 | None | SRR1792265 | Other | La1.8.1 | None | ERR502480 | Other | lineage5.1.1 | None | ERR181771 | Sensitive | lineage3.1.1 | None | ERR4769462 | Other | La1.3 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR8665825 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4820827 | Other | lineage4.1.2 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | ERR212100 | Sensitive | lineage1.2.2.1;lineage4 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR12006082 | Sensitive | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR1208756 | Other | lineage4.9 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR16278292 | Other | La1.4 | None | SRR12199409 | Other | lineage1.2.2.2 | None | ERR4817547 | Other | lineage4.2.2.1 | None | SRR3725594 | Sensitive | lineage4.9 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR1208196 | Sensitive | lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SRR2101662 | Sensitive | lineage4.3.3 | None | SRR1792247 | Other | La1.7.1 | None | SRR12006095 | Sensitive | lineage4.9 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR4817102 | Sensitive | lineage1.1.2;lineage4 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR1208277 | Other | lineage4.9 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | ERR4820679 | Other | lineage4.8 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR161125 | Sensitive | lineage4 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR1202714 | Sensitive | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1180091 | Other | lineage4.9 | None | ERR4815832 | Other | lineage3 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871413 | XDR-TB | lineage2.2.1 | None | ERR4820060 | Other | lineage4.3.3 | None | SRR6046246 | Other | lineage3 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None |
|---|
