Run ID: 666ff250-fdbf-4422-ae3a-a490bb0868ad
Sample name:
Date: 30-08-2023 10:11:46
Number of reads: 936849
Percentage reads mapped: 84.12
Median coverage: 36
Strain: lineage4.9
Spoligotype:
Drug-resistance: XDR-TB
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage4 | Euro-American | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | None | 0.97 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | rpoB | p.Gln432Pro | Assoc w R | |
isoniazid | katG | p.Ser315Asn | Assoc w R | |
ethambutol | embB | p.Met306Ile | Assoc w R | |
pyrazinamide | ||||
moxifloxacin | gyrB | p.Asn499Asp | Assoc w R - interim | |
levofloxacin | gyrB | p.Asn499Asp | Assoc w R - interim | |
bedaquiline | ||||
delamanid | ||||
pretomanid | ||||
linezolid | rplC | p.Cys154Arg | Assoc w R | |
streptomycin | ||||
amikacin | ||||
kanamycin | ||||
capreomycin | ||||
clofazimine | ||||
ethionamide | ||||
para-aminosalicylic_acid | ||||
cycloserine |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
gyrB | 6734 | p.Asn499Asp | missense_variant | 1.0 | ofloxacin | Uncertain significance | |
moxifloxacin | Assoc w R - interim | ||||||
levofloxacin | Assoc w R - interim | ||||||
fluoroquinolones | Uncertain significance | ||||||
ciprofloxacin | Uncertain significance | ||||||
rpoB | 761101 | p.Gln432Pro | missense_variant | 0.92 | rifampicin | Assoc w R | |
rplC | 801268 | p.Cys154Arg | missense_variant | 0.93 | linezolid | Assoc w R | |
katG | 2155168 | p.Ser315Asn | missense_variant | 1.0 | isoniazid | Assoc w R | |
embB | 4247431 | p.Met306Ile | missense_variant | 1.0 | ethambutol | Assoc w R |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | fluoroquinolones | |
moxifloxacin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 7622 | c.321C>T | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 7631 | c.330G>C | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 7637 | c.336C>A | synonymous_variant | 0.14 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8366 | c.1065G>C | synonymous_variant | 0.12 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8372 | c.1071G>T | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8390 | c.1089C>G | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8391 | p.Tyr364Leu | missense_variant | 0.14 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8399 | c.1098T>G | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8405 | c.1104C>T | synonymous_variant | 0.12 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8408 | c.1107A>G | synonymous_variant | 0.12 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8414 | c.1113C>T | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.11 | fluoroquinolones | |
moxifloxacin | ||||||
levofloxacin | ||||||
ciprofloxacin | ||||||
ofloxacin | ||||||
mshA | 575704 | c.357T>C | synonymous_variant | 0.11 | ethionamide | |
isoniazid | ||||||
mshA | 575725 | c.378C>G | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575734 | c.387T>G | synonymous_variant | 0.12 | ethionamide | |
isoniazid | ||||||
mshA | 575744 | p.Ala133Thr | missense_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575749 | c.402C>A | synonymous_variant | 0.12 | ethionamide | |
isoniazid | ||||||
mshA | 575761 | c.414C>T | synonymous_variant | 0.88 | ethionamide | |
isoniazid | ||||||
mshA | 575764 | c.417C>G | synonymous_variant | 0.12 | ethionamide | |
isoniazid | ||||||
mshA | 575771 | p.Val142Thr | missense_variant | 0.14 | ethionamide | |
isoniazid | ||||||
mshA | 575776 | c.429C>T | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575782 | c.435G>C | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575785 | c.438T>C | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575795 | p.Ile150Val | missense_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575800 | c.453G>C | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575803 | c.456C>T | synonymous_variant | 0.13 | ethionamide | |
isoniazid | ||||||
mshA | 575821 | c.474G>C | synonymous_variant | 0.14 | ethionamide | |
isoniazid | ||||||
mshA | 575842 | c.495G>C | synonymous_variant | 0.18 | ethionamide | |
isoniazid | ||||||
mshA | 575864 | c.517T>C | synonymous_variant | 0.16 | ethionamide | |
isoniazid | ||||||
rpoB | 759814 | p.Asp3Gly | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760316 | c.510C>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760325 | c.519G>C | synonymous_variant | 0.2 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760334 | c.528G>T | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.18 | rifampicin | |
rpoB | 760357 | p.Thr184Ser | missense_variant | 0.17 | rifampicin | |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.14 | rifampicin | |
rpoB | 760406 | c.600G>T | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760407 | p.Ser201Gly | missense_variant | 0.13 | rifampicin | |
rpoB | 760415 | c.609C>T | synonymous_variant | 0.13 | rifampicin | |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.14 | rifampicin | |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.12 | rifampicin | |
rpoB | 760769 | c.963C>G | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760784 | c.978G>T | synonymous_variant | 0.12 | rifampicin | |
rpoB | 760793 | c.987A>G | synonymous_variant | 0.14 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.14 | rifampicin | |
rpoB | 760817 | c.1011A>G | synonymous_variant | 0.13 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760826 | c.1020C>G | synonymous_variant | 0.13 | rifampicin | |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.14 | rifampicin | |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760877 | c.1071G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760883 | c.1077G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760887 | p.Thr361Val | missense_variant | 0.15 | rifampicin | |
rpoB | 760910 | c.1104C>T | synonymous_variant | 0.2 | rifampicin | |
rpoB | 760916 | c.1110C>T | synonymous_variant | 0.17 | rifampicin | |
rpoB | 760919 | c.1113C>T | synonymous_variant | 0.17 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760931 | c.1125C>G | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760958 | c.1152G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760965 | p.Met387Leu | missense_variant | 0.16 | rifampicin | |
rpoB | 760970 | c.1164G>C | synonymous_variant | 0.14 | rifampicin | |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 760988 | c.1182C>G | synonymous_variant | 0.1 | rifampicin | |
rpoB | 760991 | c.1185G>T | synonymous_variant | 0.1 | rifampicin | |
rpoB | 760997 | c.1191G>C | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.13 | rifampicin | |
rpoB | 761027 | c.1221A>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761051 | c.1245G>T | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761054 | c.1248G>C | synonymous_variant | 0.1 | rifampicin | |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.1 | rifampicin | |
rpoB | 761060 | c.1254C>G | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761063 | c.1257C>G | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761084 | c.1278C>A | synonymous_variant | 0.11 | rifampicin | |
rpoB | 761147 | c.1341C>T | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761150 | c.1344A>T | synonymous_variant | 0.13 | rifampicin | |
rpoB | 761234 | c.1428G>C | synonymous_variant | 0.1 | rifampicin | |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761264 | c.1458C>G | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761282 | c.1476C>T | synonymous_variant | 0.12 | rifampicin | |
rpoB | 761288 | c.1482G>T | synonymous_variant | 0.13 | rifampicin | |
rpoB | 762284 | c.2478G>T | synonymous_variant | 0.11 | rifampicin | |
rpoB | 762308 | c.2502G>C | synonymous_variant | 0.11 | rifampicin | |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.11 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.1 | rifampicin | |
rpoB | 762350 | c.2544C>T | synonymous_variant | 0.1 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.12 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.13 | rifampicin | |
rpoC | 762374 | c.-996G>C | upstream_gene_variant | 0.15 | rifampicin | |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 0.15 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.14 | rifampicin | |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.14 | rifampicin | |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 0.14 | rifampicin | |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.14 | rifampicin | |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.12 | rifampicin | |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.12 | rifampicin | |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.12 | rifampicin | |
rpoC | 762449 | c.-921C>A | upstream_gene_variant | 0.11 | rifampicin | |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 0.1 | rifampicin | |
rpoC | 763618 | c.249C>T | synonymous_variant | 0.1 | rifampicin | |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.12 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.14 | rifampicin | |
rpoC | 763666 | c.297G>A | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763709 | c.340C>T | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763732 | c.363C>T | synonymous_variant | 0.15 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.17 | rifampicin | |
rpoC | 763747 | c.378G>A | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763765 | c.396T>G | synonymous_variant | 0.13 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 0.11 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.1 | rifampicin | |
rpoC | 763813 | c.444C>G | synonymous_variant | 0.12 | rifampicin | |
rpoC | 764344 | c.975C>T | synonymous_variant | 0.14 | rifampicin | |
rpoC | 764353 | c.984G>T | synonymous_variant | 0.14 | rifampicin | |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.13 | rifampicin | |
rpoC | 764371 | c.1002G>C | synonymous_variant | 0.12 | rifampicin | |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.12 | rifampicin | |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.11 | rifampicin | |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.12 | rifampicin | |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.15 | rifampicin | |
rpoC | 764666 | p.Gly433Ser | missense_variant | 0.5 | rifampicin | |
rpoC | 764701 | c.1332C>G | synonymous_variant | 0.13 | rifampicin | |
rpoC | 764713 | c.1344G>T | synonymous_variant | 0.14 | rifampicin | |
rpoC | 764716 | c.1347G>C | synonymous_variant | 0.14 | rifampicin | |
rpoC | 764746 | c.1377G>T | synonymous_variant | 0.15 | rifampicin | |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.11 | rifampicin | |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.1 | rifampicin | |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.1 | rifampicin | |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.11 | rifampicin | |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.1 | rifampicin | |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | clofazimine | Uncertain significance |
bedaquiline | Uncertain significance | |||||
mmpR5 | 779181 | c.198delG | frameshift_variant | 1.0 | clofazimine | Uncertain significance |
bedaquiline | Uncertain significance | |||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Uncertain significance |
rpsL | 781502 | c.-58G>T | upstream_gene_variant | 1.0 | streptomycin | Uncertain significance |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.12 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.13 | linezolid | Uncertain significance |
rplC | 800633 | c.-176T>C | upstream_gene_variant | 0.12 | linezolid | |
rplC | 800645 | c.-164C>G | upstream_gene_variant | 0.13 | linezolid | |
rplC | 800648 | c.-161A>G | upstream_gene_variant | 0.15 | linezolid | Uncertain significance |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.12 | linezolid | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472019 | n.174G>A | non_coding_transcript_exon_variant | 0.2 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472023 | n.178G>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472031 | n.186G>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472033 | n.188A>C | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472035 | n.190G>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472040 | n.195T>G | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472041 | n.196C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472042 | n.197T>G | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.12 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.12 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.21 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472286 | n.441C>A | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472287 | n.442C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472289 | n.444T>G | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472290 | n.445C>G | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472297 | n.453_465delGTCCGGGTTCTCT | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 0.17 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472324 | n.479G>C | non_coding_transcript_exon_variant | 0.16 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 0.16 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472327 | n.482G>A | non_coding_transcript_exon_variant | 0.16 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472328 | n.483G>T | non_coding_transcript_exon_variant | 0.16 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472337 | n.492C>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472380 | n.535G>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.19 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472846 | n.1001C>A | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472847 | n.1002G>C | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472858 | n.1013G>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472860 | n.1015C>G | non_coding_transcript_exon_variant | 0.13 | linezolid | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1472861 | n.1016G>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | Uncertain significance | |||||
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.1 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.1 | linezolid | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
aminoglycosides | ||||||
streptomycin | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1474174 | n.517A>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474183 | n.526T>C | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1474294 | n.638_649delCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
rrl | 1474446 | n.789C>T | non_coding_transcript_exon_variant | 0.1 | linezolid | Uncertain significance |
rrl | 1474673 | n.1016T>C | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.1 | linezolid | |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1475647 | n.1990G>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
rrl | 1475764 | n.2107A>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 0.18 | linezolid | |
rrl | 1475775 | n.2118G>A | non_coding_transcript_exon_variant | 0.18 | linezolid | |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.15 | linezolid | Uncertain significance |
rrl | 1475991 | n.2334T>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
rrl | 1475995 | n.2338G>A | non_coding_transcript_exon_variant | 0.15 | linezolid | |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476033 | n.2376T>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476035 | n.2378G>C | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476046 | n.2389G>T | non_coding_transcript_exon_variant | 0.1 | linezolid | |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
rrl | 1476088 | n.2431A>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
rrl | 1476099 | n.2442A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.16 | linezolid | |
rrl | 1476251 | n.2594T>G | non_coding_transcript_exon_variant | 0.2 | linezolid | |
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.2 | linezolid | Uncertain significance |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.19 | linezolid | |
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.19 | linezolid | Uncertain significance |
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
rrl | 1476540 | n.2883C>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.11 | pyrazinamide | |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833808 | c.267G>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833862 | c.321G>T | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833894 | p.Ala118Glu | missense_variant | 0.17 | pyrazinamide | |
rpsA | 1833904 | c.363G>A | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1833970 | c.429G>T | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1833976 | c.435C>T | synonymous_variant | 0.14 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.14 | pyrazinamide | |
rpsA | 1833991 | c.450C>A | synonymous_variant | 0.13 | pyrazinamide | |
rpsA | 1834009 | c.468C>T | synonymous_variant | 0.11 | pyrazinamide | |
rpsA | 1834012 | c.471G>T | synonymous_variant | 0.12 | pyrazinamide | |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.12 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.14 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.14 | pyrazinamide | |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.12 | pyrazinamide | |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.11 | pyrazinamide | |
rpsA | 1834246 | c.705G>C | synonymous_variant | 0.1 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.1 | pyrazinamide | |
rpsA | 1834252 | c.711C>G | synonymous_variant | 0.13 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.15 | pyrazinamide | |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.13 | pyrazinamide | |
rpsA | 1834279 | c.738C>T | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834297 | c.756C>T | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834345 | c.804C>T | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834423 | c.882G>T | synonymous_variant | 0.15 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.14 | pyrazinamide | |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.11 | pyrazinamide | |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.11 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.11 | pyrazinamide | |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 | capreomycin | |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | clofazimine | Uncertain significance |
bedaquiline | Uncertain significance | |||||
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.11 | rifampicin | |
rpoA | 3877695 | c.813C>G | synonymous_variant | 0.17 | rifampicin | |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.13 | rifampicin | |
rpoA | 3877728 | c.780C>G | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877731 | c.777G>T | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877734 | c.774G>C | synonymous_variant | 0.15 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.15 | rifampicin | |
rpoA | 3877749 | c.759C>T | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.13 | rifampicin | |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.15 | rifampicin | |
rpoA | 3877785 | c.723C>A | synonymous_variant | 0.15 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.18 | rifampicin | |
rpoA | 3877848 | c.660C>T | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3877856 | c.652T>C | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3877875 | c.633T>A | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3877878 | c.630G>C | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3877887 | c.621G>C | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3877893 | c.615C>T | synonymous_variant | 0.17 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.18 | rifampicin | |
rpoA | 3877908 | c.600T>C | synonymous_variant | 0.18 | rifampicin | |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877926 | c.582G>C | synonymous_variant | 0.14 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.13 | rifampicin | |
rpoA | 3877971 | p.Asp179Glu | missense_variant | 0.13 | rifampicin | |
clpC1 | 4038695 | c.2010C>G | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4038725 | c.1980C>G | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.1 | pyrazinamide | |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039295 | c.1410A>C | synonymous_variant | 0.1 | pyrazinamide | |
clpC1 | 4039298 | c.1407T>C | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4039310 | c.1395A>G | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4039313 | c.1392C>G | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4039320 | p.Ala462Gly | missense_variant | 0.13 | pyrazinamide | |
clpC1 | 4039322 | c.1383T>C | synonymous_variant | 0.13 | pyrazinamide | |
clpC1 | 4039328 | c.1377A>C | synonymous_variant | 0.13 | pyrazinamide | |
clpC1 | 4039337 | p.Thr456Gln | missense_variant | 0.12 | pyrazinamide | |
clpC1 | 4039352 | c.1353C>T | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4039670 | c.1035G>C | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039682 | c.1023C>G | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.15 | pyrazinamide | |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.16 | pyrazinamide | |
clpC1 | 4039742 | c.963C>T | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039883 | c.822G>A | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039889 | c.816G>C | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.13 | pyrazinamide | |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039934 | c.771G>A | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.11 | pyrazinamide | |
clpC1 | 4040003 | c.702G>C | synonymous_variant | 0.12 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.14 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.16 | pyrazinamide | |
embB | 4248112 | c.1599C>G | synonymous_variant | 0.1 | ethambutol | |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.12 | ethambutol | |
embB | 4248158 | p.Cys549Ser | missense_variant | 0.12 | ethambutol | |
embB | 4248167 | p.Thr552Ala | missense_variant | 0.12 | ethambutol | |
embB | 4248170 | p.Ala553Ser | missense_variant | 0.12 | ethambutol | |
embB | 4248173 | p.Val554Leu | missense_variant | 0.12 | ethambutol | |
embB | 4248199 | c.1686A>G | synonymous_variant | 0.12 | ethambutol | |
embB | 4248200 | p.Ile563Val | missense_variant | 0.12 | ethambutol | |
embB | 4248205 | c.1692C>G | synonymous_variant | 0.12 | ethambutol | |
embB | 4248206 | p.Ser565Gly | missense_variant | 0.12 | ethambutol | Uncertain significance |
embB | 4248220 | c.1707A>G | synonymous_variant | 0.12 | ethambutol | |
embB | 4248225 | p.Ala571Val | missense_variant | 0.12 | ethambutol | |
embB | 4248233 | c.1720C>T | synonymous_variant | 0.12 | ethambutol | |
embB | 4248242 | p.Val577Ile | missense_variant | 0.1 | ethambutol | |
embB | 4248252 | p.Gly580Ala | missense_variant | 0.1 | ethambutol | |
embB | 4248256 | c.1743C>G | synonymous_variant | 0.1 | ethambutol | |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 | streptomycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance |