Run ID: 1a53fae0-ad6e-47d9-8ba3-621f93a1dcd6
Sample name:
Date: 04-03-2024 16:14:47
Number of reads: 42061
Percentage reads mapped: 0.79
Median coverage: 0
Strain: lineage4.9
Spoligotype:
Drug-resistance: Other
| Lineage | Family | RDs | Frequency |
|---|---|---|---|
| lineage4.9 | Euro-American (H37Rv-like) | None | 1.0 |
| lineage1.2.1.2 | Indo-Oceanic | RD239 | 0.76 |
| Drug | Resistance | Supporting mutations | WHO confidence | Comment |
|---|---|---|---|---|
| rifampicin | ||||
| isoniazid | ||||
| ethambutol | ||||
| pyrazinamide | ||||
| moxifloxacin | ||||
| levofloxacin | ||||
| bedaquiline | ||||
| delamanid | ||||
| pretomanid | ||||
| linezolid | ||||
| streptomycin | rrs | n.799C>T | Uncertain significance | |
| n.888G>A | Uncertain significance | |||
| amikacin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R - interim | |||
| kanamycin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R | |||
| capreomycin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R | |||
| clofazimine | ||||
| ethionamide | ||||
| para-aminosalicylic_acid | ||||
| cycloserine |
| Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
|---|---|---|---|---|---|---|---|
| rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.49 | streptomycin | Uncertain significance | |
| rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 0.52 | streptomycin | Uncertain significance | |
| rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.94 | kanamycin | Uncertain significance | |
| capreomycin | Uncertain significance | ||||||
| aminoglycosides | Uncertain significance | ||||||
| amikacin | Uncertain significance | ||||||
| rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.91 | kanamycin | Assoc w R | |
| capreomycin | Assoc w R | ||||||
| aminoglycosides | Uncertain significance | ||||||
| amikacin | Assoc w R - interim |
| Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
|---|---|---|---|---|---|---|
| rrs | 1472102 | n.257G>A | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 0.75 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472507 | n.662C>G | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.5 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.44 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.45 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472579 | n.734G>C | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 0.32 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.41 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472680 | n.835C>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472690 | n.845C>A | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472755 | n.910G>A | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.44 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.54 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.84 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472955 | n.1110C>T | non_coding_transcript_exon_variant | 0.88 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.92 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.88 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.92 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.85 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473192 | n.1347A>G | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473305 | n.1460G>T | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrl | 1473697 | n.40C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1473698 | n.41G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1473718 | n.61G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1473721 | n.64G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1473722 | n.65G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1473731 | n.74T>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474202 | n.545T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | Uncertain significance |
| rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474280 | n.623C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474284 | n.631_633delCCT | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474293 | n.637_651delCCTCTCCGGAGGAGG | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474317 | n.660G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474353 | n.696A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474383 | n.726G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.91 | linezolid | |
| rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.94 | linezolid | |
| rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.92 | linezolid | |
| rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.89 | linezolid | |
| rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.89 | linezolid | |
| rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.89 | linezolid | |
| rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.89 | linezolid | |
| rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.9 | linezolid | |
| rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.91 | linezolid | |
| rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474639 | n.982G>C | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.91 | linezolid | |
| rrl | 1474674 | n.1017A>C | non_coding_transcript_exon_variant | 0.9 | linezolid | |
| rrl | 1474675 | n.1018C>A | non_coding_transcript_exon_variant | 0.93 | linezolid | |
| rrl | 1474676 | n.1019T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474694 | n.1037C>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1474709 | n.1053_1056delTGGT | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474717 | n.1060_1061insGTGAG | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474723 | n.1066G>A | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474734 | n.1077G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.94 | linezolid | |
| rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.9 | linezolid | |
| rrl | 1474790 | n.1133C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1474831 | n.1174A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1474883 | n.1226T>C | non_coding_transcript_exon_variant | 0.91 | linezolid | |
| rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475673 | n.2016T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475699 | n.2042C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475703 | n.2046A>G | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1475722 | n.2065G>T | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| rrl | 1475751 | n.2094C>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1475752 | n.2095C>T | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.88 | linezolid | |
| rrl | 1475756 | n.2099T>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1475758 | n.2101A>G | non_coding_transcript_exon_variant | 0.88 | linezolid | |
| rrl | 1475767 | n.2110G>T | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.85 | linezolid | |
| rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.88 | linezolid | |
| rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475978 | n.2321C>T | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | Uncertain significance |
| rrl | 1475993 | n.2336C>T | non_coding_transcript_exon_variant | 0.96 | linezolid | Uncertain significance |
| rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | Uncertain significance |
| rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.78 | linezolid | |
| rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| rrl | 1476135 | n.2478T>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1476141 | n.2484A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476153 | n.2496T>C | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.79 | linezolid | |
| rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 0.93 | linezolid | Uncertain significance |
| rrl | 1476195 | n.2538C>A | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| rrl | 1476196 | n.2539C>A | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1476204 | n.2547C>A | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476210 | n.2553G>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1476211 | n.2554G>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476212 | n.2555T>C | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1476215 | n.2558C>A | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.87 | linezolid | |
| rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.86 | linezolid | |
| rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476229 | n.2572C>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.7 | linezolid | |
| rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.29 | linezolid | |
| rrl | 1476252 | n.2595T>A | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.83 | linezolid | |
| rrl | 1476253 | n.2596A>G | non_coding_transcript_exon_variant | 0.6 | linezolid | |
| rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.65 | linezolid | |
| rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | Uncertain significance |
| rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.39 | linezolid | |
| rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.97 | linezolid | |
| rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476297 | n.2640C>A | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476299 | n.2642C>G | non_coding_transcript_exon_variant | 0.54 | linezolid | |
| rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.92 | linezolid | |
| rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1476308 | n.2651G>C | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.98 | linezolid | |
| rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.33 | linezolid | |
| rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.5 | linezolid | |
| rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.48 | linezolid | Uncertain significance |
| rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.44 | linezolid | |
| rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.59 | linezolid | |
| rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.39 | linezolid | |
| rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.6 | linezolid | |
| rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.91 | linezolid | |
| rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.61 | linezolid | Uncertain significance |
| rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.96 | linezolid | |
| rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1476514 | n.2857C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.78 | linezolid | |
| rrl | 1476519 | n.2862C>G | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| rrl | 1476524 | n.2867C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.99 | linezolid | |
| rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.95 | linezolid | Uncertain significance |
| rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 1.0 | linezolid | |
| rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.95 | linezolid | |
| rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.75 | linezolid |
