EBG00000313325 - n.1302G>C


Drug resistance types
227 Sensitive 6 RR-TB 10 HR-TB 28 MDR-TB 19 Pre-XDR-TB 2 XDR-TB 62 Other
lineage Counts
lineage Count
lineage1.2.2.2 4
lineage4.6.1.1 3
lineage2.2.1 46
lineage4.3.3 13
lineage4.4.1.1.1 3
lineage4.4.1.1 11
lineage4.3.4.2.1 26
lineage4.8 16
La1.8.1 17
La1.2 1
lineage4.6.1.2 3
lineage4.9 57
lineage4.1.1.3 7
lineage4.5 3
lineage1.1.3.2 7
lineage4.1.2.1 7
lineage4.2;lineage4.9 1
lineage3.1.1 7
lineage4.1.1.3;lineage4.9 1
lineage4.9.1 1
lineage1.1.2 4
lineage4.7 2
lineage4.3.2.1 13
lineage2.2.2 11
lineage1.2.2.1;lineage4 2
lineage3.1;lineage4 1
lineage4.6.2.2 2
lineage4.1.1.1 3
M.canetti;lineage2.1 1
lineage4.3.4.1 7
lineage4.1.2 10
lineage6.1.1 2
lineage2.2.1.1 1
lineage5.1.1 3
lineage4 3
lineage2.2.1;lineage4.9 2
La1.7.1 4
lineage4.2.1 5
lineage3.1.2.1 1
lineage4.4.1.2 2
lineage1.1.3.3 1
M.canetti;lineage2.1;lineage4.9 1
La1.2.BCG 6
lineage1.1.1 2
La3;M.canetti;lineage2.1;lineage4.9 1
La1.6 2
La1.7;lineage4.9 1
lineage4.2.1.1 1
lineage1.2.1.2.1 1
lineage1 1
lineage3.1;lineage4.1.2 1
lineage4.1 1
La1.8.X-unk6 1
lineage1.2.2.1 1
1
lineage4.3.4.2 3
lineage3 6
lineage1.1.3.1 1
lineage4.1.2.1.1 1
lineage4.1.4 1
lineage3.1.2.2 1
lineage4.3.2.1;lineage4.9 1
lineage4.3.4.1;lineage4.9 1
lineage1.1.2;lineage4 2
lineage4.9;lineage5.1.1 1
La1.3 1
spoligotype Counts
spoligotype Count
None 354
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3105736 Sensitive lineage1.2.2.2 None
SRR7535079 Sensitive lineage4.6.1.1 None
ERR181905 Sensitive lineage2.2.1 mw
SRR6982514 Sensitive lineage4.3.3 None
SRR11871413 XDR-TB lineage2.2.1 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR8346061 RR-TB lineage2.2.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
ERR161150 Sensitive lineage4.3.4.2.1 None
SAMN02350437 MDR-TB lineage4.8 None
ERR4188213 Other La1.8.1 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
ERR5087606 Other La1.8.1 None
SRR6896255 Sensitive lineage4.3.3 None
SRR13199734 Other La1.2 None
ERR163970 Sensitive lineage4.6.1.2 None
SRR6982414 Sensitive lineage4.9 None
ERR176640 Sensitive lineage4.3.4.2.1 mw
SRR6982146 Sensitive lineage4.1.1.3 None
ERR2179695 Sensitive lineage4.5 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR11972283 MDR-TB lineage2.2.1 None
ERR3804154 Sensitive lineage4.1.2.1 None
SRR1168955 Sensitive lineage4.2;lineage4.9 None
SRR6982328 Other lineage3.1.1 None
SRR21764246 Other lineage4.9 None
ERR502484 Sensitive lineage4.9 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
ERR212082 Sensitive lineage4.9.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR10869017 Pre-XDR-TB lineage4.3.3 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR473340 Sensitive lineage1.1.2 None
ERR502498 Sensitive lineage4.9 None
SRR6982056 Other lineage4.3.4.2.1 None
SRR21737226 Sensitive lineage4.5 None
SRR6981975 Sensitive lineage4.7 None
SRR10614047 Sensitive lineage4.9 None
SRR2101636 Other lineage4.3.2.1 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR2515854 Sensitive lineage2.2.1 None
SRR10869302 MDR-TB lineage4.3.2.1 None
ERR212112 Sensitive lineage1.2.2.1;lineage4 None
ERR1873461 Pre-XDR-TB lineage2.2.2 None
ERR405222 Sensitive lineage3.1;lineage4 None
ERR1873557 Pre-XDR-TB lineage2.2.1 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR6982011 Sensitive lineage4.1.1.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR6855851 Other lineage4.3.4.2.1 None
ERR1063873 Sensitive lineage4.3.4.2.1 None
SRR6045957 Other lineage4.9 None
SRR7240147 Other La1.8.1 None
ERR736818 Sensitive lineage4.3.3 None
SRR2101681 Sensitive lineage4.8 None
SRR12199468 Sensitive lineage4.9 None
ERR190332 Sensitive lineage4.3.4.1 None
SRR11972378 MDR-TB lineage1.1.2 None
ERR212015 Sensitive lineage4.8 None
SRR1182994 Sensitive lineage4.1.2 None
SRR1735598 RR-TB lineage4.9 None
SRR6982349 Sensitive lineage2.2.1 None
SRR7504776 Sensitive lineage4.9 None
ERR9787323 Sensitive lineage6.1.1 None
SRR6982050 Other lineage4.3.4.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
ERR502483 Sensitive lineage4.9 None
SRR6982075 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR6824516 Sensitive lineage2.2.1.1 None
ERR502493 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR4188010 Other La1.8.1 None
ERR1082134 Sensitive lineage5.1.1 None
SRR7504782 Sensitive lineage4.9 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
SRR6982092 Other lineage4.3.2.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR1023250 Sensitive lineage6.1.1 None
SRR12882699 Sensitive lineage1.1.2 None
ERR1873476 Pre-XDR-TB lineage2.2.2 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
SRR10482944 Other La1.8.1 None
ERR2179857 Sensitive lineage4 None
SRR11972390 MDR-TB lineage2.2.1 None
SRR6045205 Sensitive lineage4.9 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
ERR161045 Sensitive lineage4.3.4.2.1 None
SRR18391772 Other La1.7.1 None
ERR108424 Sensitive lineage4.8 None
ERR4627392 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR3725587 Sensitive lineage4.9 None
ERR702399 Sensitive lineage5.1.1 gh
ERR245764 HR-TB lineage3.1.1 None
SRR4033203 Sensitive lineage4.9 None
ERR212042 HR-TB lineage3.1.1 None
ERR2515148 Sensitive lineage4.3.3 None
SRR6982148 Sensitive lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR5341462 Pre-XDR-TB lineage3.1.2.1 None
SRR6855718 Other lineage4.8 None
ERR176781 Sensitive lineage1.1.3.2 None
ERR736822 Sensitive lineage4.4.1.2 None
SRR6982076 Sensitive lineage4.9 None
SRR1062820 Pre-XDR-TB lineage2.2.1 None
ERR4769507 Sensitive lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR15522852 Sensitive lineage1.1.3.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21714045 Other lineage2.2.1 None
ERR736879 Sensitive lineage1.1.3.2 None
ERR6358728 MDR-TB lineage4.6.1.2 None
SRR6982190 Sensitive lineage4.3.3 None
ERR323068 Sensitive lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SRR1915483 Other La1.2.BCG None
ERR751729 Other lineage1.1.1 None
SRR1173361 MDR-TB lineage4.6.1.1 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR2515460 Other lineage4.8 za
ERR323067 Sensitive lineage4.3.4.2.1 None
SRR1062851 MDR-TB lineage4.8 None
SRR6785301 Sensitive lineage2.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4188253 Other La1.8.1 None
ERR216949 Sensitive lineage4.3.4.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR6855915 Sensitive lineage4.9 None
SRR10993957 Other La1.6 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR7240506 Other La1.8.1 None
SRR7646056 Other lineage4.2.1.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982337 Sensitive lineage4.7 None
SRR124453 HR-TB lineage2.2.2 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR176739 Sensitive lineage4.4.1.1 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR6982198 HR-TB lineage1 None
SRR6982419 Other lineage4.8 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101625 Other lineage3.1;lineage4.1.2 None
SRR2101711 Sensitive lineage2.2.1 None
SRR17406750 Other lineage1.1.2 None
ERR502485 Sensitive lineage4.9 None
ERR11050198 Sensitive lineage1.2.2.2 None
ERR1203071 Sensitive lineage4.8 None
SRR2101661 Sensitive lineage4.1 None
SRR7240537 Other La1.8.1 None
ERR502497 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR7504773 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
SRR7504779 Sensitive lineage4.9 None
ERR1873437 HR-TB lineage2.2.2 None
SRR7240420 Other La1.8.X-unk6 None
SRR1792265 Other La1.8.1 None
ERR5162118 Other La1.8.1 None
SRR1915487 Other La1.2.BCG None
SRR6982106 Sensitive lineage4.8 None
SAMN02350409 Pre-XDR-TB lineage2.2.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR221569 Sensitive lineage1.2.2.1 mw
ERR5311086 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR12420396 Sensitive lineage2.2.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
SRR6982196 Sensitive None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR212100 Sensitive lineage1.2.2.1;lineage4 None
ERR323061 Sensitive lineage4.9 None
SRR6982178 Sensitive lineage2.2.1 None
ERR473311 Sensitive lineage4.9 None
ERR473304 Sensitive lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR7236369 Other La1.8.1 None
ERR9786447 Sensitive lineage4.1.2.1 None
SAMN02567676 MDR-TB lineage4.6.1.1 None
ERR502490 Sensitive lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR1915490 Other La1.2.BCG None
SRR2101786 Sensitive lineage4.4.1.1 None
ERR4769419 Sensitive lineage4.9 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6982195 Sensitive lineage4.4.1.1 None
ERR176820 Sensitive lineage4.3.4.2.1 mw
SRR6982292 Other lineage4.4.1.1.1 None
ERR161201 Sensitive lineage1.1.3.2 None
SRR6855917 Sensitive lineage4.8 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR2515916 Other lineage4.3.4.2.1 za
SRR2101827 Other lineage4.3.4.2.1 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
ERR323057 Sensitive lineage4.9 None
SRR7240398 Other La1.8.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR181940 Sensitive lineage3.1.1 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR7535082 Other lineage4.9 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
ERR4822114 Other lineage4.1.2.1 None
ERR212003 Sensitive lineage4.3.4.2.1 None
ERR736808 Sensitive lineage2.2.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
ERR1873561 XDR-TB lineage2.2.2 None
ERR190388 Sensitive lineage4.9 None
ERR176780 Sensitive lineage4.9 None
ERR987719 HR-TB lineage3 None
ERR718268 Sensitive lineage1.1.1 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR3725590 Sensitive lineage4.9 None
SRR2101693 Sensitive lineage4.1.2 None
SRR1011480 MDR-TB lineage4.8 None
SRR2101312 MDR-TB lineage2.2.1 None
ERR161125 Sensitive lineage4 None
SRR3725594 Sensitive lineage4.9 None
ERR176619 Sensitive lineage4.9 None
SRR6982048 Sensitive lineage4.3.2.1 None
ERR1034791 MDR-TB lineage4.9 None
SRR1062859 Sensitive lineage2.2.1 None
SRR6982227 Sensitive lineage4.9 None
SRR2101816 Other lineage4.8 None
SRR6982070 Sensitive lineage2.2.1;lineage4.9 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR181750 Sensitive lineage1.1.3.2 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR3725585 Sensitive lineage4.9 None
ERR9786558 Other lineage4.3.4.2 None
SRR6982229 Sensitive lineage2.2.1 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR5758436 Other lineage2.2.2 None
ERR2179737 HR-TB lineage4.2.1 None
ERR181749 Sensitive lineage4.3.4.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR9786258 Sensitive lineage4.3.4.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR6981981 Sensitive lineage4.3.3 None
ERR10762317 Pre-XDR-TB lineage4.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
ERR133816 MDR-TB lineage2.2.1 None
ERR3324354 Sensitive lineage4.8 None
SRR6982139 Sensitive lineage4.9 None
ERR161170 Sensitive lineage4.3.4.1 None
SRR17856664 Sensitive lineage3 None
SRR22175227 HR-TB lineage3 None
ERR502480 Other lineage5.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR1181085 Sensitive lineage4.1.2 None
ERR4769537 Sensitive lineage4.9 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6397389 Sensitive lineage4.1.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR1166181 Sensitive lineage4.2.1 None
SRR10123881 Sensitive lineage4.1.4 None
ERR1063847 Sensitive lineage3.1.1 None
ERR126614 Sensitive lineage4.3.4.2.1 None
ERR6359064 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR10129602 Sensitive lineage4.3.4.2 None
SRR2101663 Sensitive lineage1.1.3.2 None
SRR6824550 Sensitive lineage4.5 None
SRR1915484 Other La1.2.BCG None
SRR7535080 Sensitive lineage4.8 None
SRR6981948 Sensitive lineage4.3.2.1 None
ERR3283051 Other lineage4.9 None
SRR6982484 Other lineage3.1.1 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR072033 Sensitive lineage3.1.2.2 None
SRR21240029 Sensitive lineage4.3.3 None
ERR7911622 Pre-XDR-TB lineage2.2.2 None
SRR21714038 Sensitive lineage4.3.3 None
SRR3725589 Sensitive lineage4.9 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
ERR216950 Sensitive lineage1.1.3.2 None
ERR779661 Sensitive lineage4.3.4.2.1 None
ERR323048 Sensitive lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473278 Sensitive lineage4.9 None
SRR6981939 Other lineage4.3.4.2.1 None
SRR10993953 Other La1.6 None
SRR2101617 Sensitive lineage4.1.1.1 None
ERR161173 Sensitive lineage4.3.4.2.1 None
ERR4817102 Sensitive lineage1.1.2;lineage4 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR5162133 Sensitive La1.8.1 None
ERR245740 Sensitive lineage4.1.2 None
SRR7240324 Other La1.8.1 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR6982213 Sensitive lineage4.3.2.1 None
ERR181708 RR-TB lineage1.1.2;lineage4 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
SRR1792232 Other La1.7.1 None
SRR1792247 Other La1.7.1 None
SRR18391683 Other La1.7.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6824624 Sensitive lineage2.2.1 None
SRR7444074 Sensitive lineage4.9 None
SRR6484909 Sensitive lineage2.2.1 None
SRR6981993 Sensitive lineage4.3.2.1 None
SRR6982057 HR-TB lineage4.3.3 None
SRR6982078 Sensitive lineage4.9 None
SRR1915486 Other La1.2.BCG None
SRR17832798 Sensitive lineage3 None
ERR779662 Sensitive lineage3.1.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
ERR176672 Sensitive lineage4.3.4.2.1 None
SRR7504786 Sensitive lineage4.9 None
ERR216930 Sensitive lineage4.3.4.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
ERR2515484 Sensitive lineage4.8 None
SRR7535074 Sensitive lineage3 None
SRR2101685 Sensitive lineage4.9 None
ERR4188255 Sensitive lineage4.9 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR7535053 Sensitive lineage3 None
ERR8025347 Sensitive lineage4.9 None
ERR1873463 MDR-TB lineage2.2.2 None
SRR4034393 MDR-TB lineage4.1.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
ERR4627379 Other La1.8.1 None
ERR4769479 Other La1.3 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR502472 Sensitive lineage4.6.2.2 None
ERR176450 Sensitive lineage4.1.1.3 None
SRR6484983 Sensitive lineage4.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
ERR2179850 Sensitive lineage4 None
ERR2660495 Sensitive lineage1.2.2.2 None