Run ID: 78d8d552-ced1-4f4d-bcc2-07802902985e
Sample name:
Date: 06-10-2023 20:50:50
Number of reads: 3660413
Percentage reads mapped: 97.79
Median coverage: 110
Strain: lineage4.9
Spoligotype:
Drug-resistance: RR-TB
| Lineage | Family | RDs | Frequency |
|---|---|---|---|
| lineage4 | Euro-American | None | 0.98 |
| lineage4.9 | Euro-American (H37Rv-like) | None | 0.96 |
| Drug | Resistance | Supporting mutations | WHO confidence | Comment |
|---|---|---|---|---|
| rifampicin | rpoB | p.Ser441Ala | Assoc w R - interim | |
| isoniazid | ||||
| ethambutol | ||||
| pyrazinamide | ||||
| moxifloxacin | ||||
| levofloxacin | ||||
| bedaquiline | ||||
| delamanid | ||||
| pretomanid | ||||
| linezolid | ||||
| streptomycin | rrs | n.799C>T | Uncertain significance | |
| n.888G>A | Uncertain significance | |||
| amikacin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R - interim | |||
| kanamycin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R | |||
| capreomycin | rrs | n.1402C>A | Uncertain significance | |
| n.1484G>T | Assoc w R | |||
| clofazimine | ||||
| ethionamide | ||||
| para-aminosalicylic_acid | ||||
| cycloserine |
| Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
|---|---|---|---|---|---|---|---|
| rpoB | 761127 | p.Ser441Ala | missense_variant | 0.11 | rifampicin | Assoc w R - interim | |
| rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.16 | streptomycin | Uncertain significance | |
| rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 0.63 | streptomycin | Uncertain significance | |
| rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.41 | kanamycin | Uncertain significance | |
| capreomycin | Uncertain significance | ||||||
| aminoglycosides | Uncertain significance | ||||||
| amikacin | Uncertain significance | ||||||
| rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.3 | kanamycin | Assoc w R | |
| capreomycin | Assoc w R | ||||||
| aminoglycosides | Uncertain significance | ||||||
| amikacin | Assoc w R - interim |
| Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
|---|---|---|---|---|---|---|
| gyrB | 5752 | c.513G>A | synonymous_variant | 0.13 | fluoroquinolones | |
| moxifloxacin | ||||||
| levofloxacin | ||||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 6406 | c.-896C>T | upstream_gene_variant | 0.13 | fluoroquinolones | |
| moxifloxacin | ||||||
| levofloxacin | ||||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 7362 | p.Glu21Gln | missense_variant | 0.1 | fluoroquinolones | |
| moxifloxacin | Uncertain significance | |||||
| levofloxacin | Uncertain significance | |||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 7585 | p.Ser95Thr | missense_variant | 0.16 | fluoroquinolones | |
| moxifloxacin | Uncertain significance | |||||
| levofloxacin | Uncertain significance | |||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 8741 | c.1440C>T | synonymous_variant | 0.11 | fluoroquinolones | |
| moxifloxacin | ||||||
| levofloxacin | ||||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 9143 | c.1842T>C | synonymous_variant | 0.11 | fluoroquinolones | |
| moxifloxacin | ||||||
| levofloxacin | ||||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| gyrA | 9304 | p.Gly668Asp | missense_variant | 0.12 | fluoroquinolones | |
| moxifloxacin | Uncertain significance | |||||
| levofloxacin | Uncertain significance | |||||
| ciprofloxacin | ||||||
| ofloxacin | ||||||
| mshA | 576108 | p.Ala254Gly | missense_variant | 0.29 | ethionamide | Uncertain significance |
| isoniazid | ||||||
| rpoB | 761133 | c.1327T>C | synonymous_variant | 0.11 | rifampicin | |
| rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.12 | rifampicin | |
| rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.12 | rifampicin | |
| rpoC | 762971 | c.-399G>C | upstream_gene_variant | 0.13 | rifampicin | |
| rpoC | 762980 | c.-390T>C | upstream_gene_variant | 0.11 | rifampicin | |
| rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.13 | rifampicin | |
| rpoC | 762995 | c.-375G>C | upstream_gene_variant | 0.1 | rifampicin | |
| rpoC | 763031 | c.-339T>C | upstream_gene_variant | 0.16 | rifampicin | |
| rpoB | 763038 | p.Thr1078Ala | missense_variant | 0.11 | rifampicin | |
| rpoC | 763043 | c.-327G>C | upstream_gene_variant | 0.11 | rifampicin | |
| rpoC | 763053 | c.-317T>C | upstream_gene_variant | 0.11 | rifampicin | |
| rpoC | 763575 | p.Arg69Pro | missense_variant | 0.11 | rifampicin | Uncertain significance |
| rpoC | 764605 | c.1236G>T | synonymous_variant | 0.11 | rifampicin | |
| rpoC | 764611 | c.1242G>T | synonymous_variant | 0.12 | rifampicin | |
| rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472078 | n.233C>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472089 | n.244C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472094 | n.249T>A | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472102 | n.257G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472108 | n.263C>A | non_coding_transcript_exon_variant | 0.42 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472122 | n.277G>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472124 | n.279C>T | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472127 | n.282C>T | non_coding_transcript_exon_variant | 0.39 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472128 | n.283G>C | non_coding_transcript_exon_variant | 0.27 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472129 | n.284G>T | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472130 | n.285G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472135 | n.290C>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472137 | n.292G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472138 | n.293C>T | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472147 | n.302G>A | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.79 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472151 | n.306C>T | non_coding_transcript_exon_variant | 0.33 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472153 | n.308G>A | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472155 | n.310C>T | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472210 | n.365A>C | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472214 | n.369C>G | non_coding_transcript_exon_variant | 0.21 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472215 | n.370A>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.38 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472235 | n.390G>C | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472240 | n.395G>C | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472242 | n.397C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472253 | n.408G>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472258 | n.413A>G | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472259 | n.414C>A | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472462 | n.617T>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472474 | n.629C>G | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472476 | n.631A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | ||||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.32 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472507 | n.662C>G | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472513 | n.668T>C | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.45 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.52 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.52 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472549 | n.704G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472579 | n.734G>C | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.8 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.52 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.84 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472668 | n.825_829delGGGTT | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472675 | n.830_831insAGAC | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472680 | n.835C>T | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472690 | n.845C>A | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.63 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.59 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472827 | n.982G>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 0.28 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1472959 | n.1114_1115insTA | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472967 | n.1122G>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472969 | n.1125_1126delCG | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472975 | n.1130T>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472977 | n.1132G>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472982 | n.1137G>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472988 | n.1143T>A | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.39 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1472992 | n.1147A>G | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473002 | n.1157G>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473004 | n.1159T>A | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473005 | n.1160C>T | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473008 | n.1163C>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473009 | n.1164T>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473053 | n.1208T>A | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.6 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473080 | n.1235C>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473081 | n.1236C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.64 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.66 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.42 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473130 | n.1285G>A | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473172 | n.1327T>G | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473173 | n.1328C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473221 | n.1376C>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.64 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.64 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473270 | n.1425G>A | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.54 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473277 | n.1432G>A | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473291 | n.1446G>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473294 | n.1449A>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| kanamycin | Uncertain significance | |||||
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance | |||||
| aminoglycosides | ||||||
| streptomycin | Uncertain significance | |||||
| rrs | 1473300 | n.1455C>T | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473305 | n.1460G>T | non_coding_transcript_exon_variant | 0.34 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.54 | linezolid | |
| kanamycin | ||||||
| capreomycin | ||||||
| amikacin | ||||||
| aminoglycosides | ||||||
| streptomycin | ||||||
| rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1474201 | n.545T>C | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.27 | linezolid | Uncertain significance |
| rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 0.33 | linezolid | |
| rrl | 1474280 | n.623C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474284 | n.631_633delCCT | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1474293 | n.637_651delCCTCTCCGGAGGAGG | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1474317 | n.660G>A | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1474353 | n.696A>T | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.22 | linezolid | |
| rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| rrl | 1474383 | n.726G>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.5 | linezolid | |
| rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| rrl | 1474527 | n.870T>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474528 | n.871T>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.41 | linezolid | |
| rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.41 | linezolid | |
| rrl | 1474541 | n.884G>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1474542 | n.885A>G | non_coding_transcript_exon_variant | 0.21 | linezolid | |
| rrl | 1474551 | n.894G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.38 | linezolid | |
| rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474627 | n.970G>A | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1474634 | n.977T>C | non_coding_transcript_exon_variant | 0.24 | linezolid | |
| rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.41 | linezolid | |
| rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 0.59 | linezolid | |
| rrl | 1474639 | n.982G>C | non_coding_transcript_exon_variant | 0.29 | linezolid | |
| rrl | 1474640 | n.983C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.21 | linezolid | |
| rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| rrl | 1474694 | n.1037C>T | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1474723 | n.1066G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.46 | linezolid | |
| rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| rrl | 1474780 | n.1123C>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.52 | linezolid | |
| rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.63 | linezolid | |
| rrl | 1474801 | n.1144G>A | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1474802 | n.1145T>C | non_coding_transcript_exon_variant | 0.34 | linezolid | |
| rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.58 | linezolid | |
| rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.24 | linezolid | |
| rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.45 | linezolid | |
| rrl | 1474832 | n.1175A>T | non_coding_transcript_exon_variant | 0.31 | linezolid | |
| rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| rrl | 1474883 | n.1226T>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1474901 | n.1244A>G | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1475673 | n.2016T>C | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1475686 | n.2029C>G | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1475696 | n.2039T>C | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| rrl | 1475699 | n.2042C>T | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| rrl | 1475703 | n.2046A>G | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1475715 | n.2058G>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1475722 | n.2065G>T | non_coding_transcript_exon_variant | 0.28 | linezolid | |
| rrl | 1475751 | n.2094C>A | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| rrl | 1475752 | n.2095C>T | non_coding_transcript_exon_variant | 0.31 | linezolid | |
| rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.34 | linezolid | |
| rrl | 1475756 | n.2099T>C | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.34 | linezolid | |
| rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 0.59 | linezolid | |
| rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| rrl | 1475896 | n.2239A>G | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| rrl | 1475906 | n.2249C>T | non_coding_transcript_exon_variant | 0.2 | linezolid | Uncertain significance |
| rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 0.66 | linezolid | |
| rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| rrl | 1475945 | n.2288C>A | non_coding_transcript_exon_variant | 0.18 | linezolid | |
| rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.61 | linezolid | |
| rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.4 | linezolid | |
| rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| rrl | 1475978 | n.2321C>T | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.44 | linezolid | Uncertain significance |
| rrl | 1475993 | n.2336C>T | non_coding_transcript_exon_variant | 0.34 | linezolid | Uncertain significance |
| rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.34 | linezolid | Uncertain significance |
| rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.12 | linezolid | |
| rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| rrl | 1476141 | n.2484A>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476153 | n.2496T>C | non_coding_transcript_exon_variant | 0.27 | linezolid | |
| rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1476165 | n.2508T>G | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 0.6 | linezolid | Uncertain significance |
| rrl | 1476195 | n.2538C>A | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1476196 | n.2539C>A | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.57 | linezolid | |
| rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| rrl | 1476204 | n.2547C>A | non_coding_transcript_exon_variant | 0.26 | linezolid | |
| rrl | 1476210 | n.2553G>T | non_coding_transcript_exon_variant | 0.21 | linezolid | |
| rrl | 1476211 | n.2554G>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1476212 | n.2555T>C | non_coding_transcript_exon_variant | 0.24 | linezolid | |
| rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.38 | linezolid | |
| rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.31 | linezolid | |
| rrl | 1476227 | n.2570C>T | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1476229 | n.2572C>T | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.32 | linezolid | |
| rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.37 | linezolid | |
| rrl | 1476253 | n.2596A>G | non_coding_transcript_exon_variant | 0.28 | linezolid | |
| rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.34 | linezolid | |
| rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.31 | linezolid | |
| rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.76 | linezolid | Uncertain significance |
| rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.54 | linezolid | |
| rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.23 | linezolid | |
| rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.68 | linezolid | |
| rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.51 | linezolid | |
| rrl | 1476299 | n.2642C>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.16 | linezolid | |
| rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.36 | linezolid | |
| rrl | 1476308 | n.2651G>C | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.69 | linezolid | |
| rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.49 | linezolid | |
| rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.56 | linezolid | |
| rrl | 1476336 | n.2679C>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.6 | linezolid | Uncertain significance |
| rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| rrl | 1476356 | n.2699C>A | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| rrl | 1476357 | n.2700T>C | non_coding_transcript_exon_variant | 0.2 | linezolid | |
| rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.75 | linezolid | |
| rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.28 | linezolid | |
| rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.67 | linezolid | |
| rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.24 | linezolid | |
| rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.78 | linezolid | |
| rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.73 | linezolid | |
| rrl | 1476384 | n.2727G>T | non_coding_transcript_exon_variant | 0.13 | linezolid | |
| rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.35 | linezolid | |
| rrl | 1476411 | n.2754G>A | non_coding_transcript_exon_variant | 0.21 | linezolid | |
| rrl | 1476425 | n.2768G>A | non_coding_transcript_exon_variant | 0.5 | linezolid | |
| rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.62 | linezolid | |
| rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.85 | linezolid | |
| rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.65 | linezolid | |
| rrl | 1476442 | n.2785T>A | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476443 | n.2786G>T | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476455 | n.2798C>A | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476456 | n.2799A>T | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476463 | n.2806C>T | non_coding_transcript_exon_variant | 0.17 | linezolid | |
| rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.46 | linezolid | Uncertain significance |
| rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.79 | linezolid | |
| rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.82 | linezolid | |
| rrl | 1476514 | n.2857C>T | non_coding_transcript_exon_variant | 0.43 | linezolid | |
| rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.3 | linezolid | |
| rrl | 1476517 | n.2860C>T | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| rrl | 1476519 | n.2862C>G | non_coding_transcript_exon_variant | 0.48 | linezolid | |
| rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.5 | linezolid | |
| rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.55 | linezolid | |
| rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.53 | linezolid | |
| rrl | 1476537 | n.2880A>G | non_coding_transcript_exon_variant | 0.19 | linezolid | |
| rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.41 | linezolid | |
| rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.27 | linezolid | Uncertain significance |
| rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.44 | linezolid | |
| rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.47 | linezolid | |
| rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.38 | linezolid | |
| rrl | 1476572 | n.2915G>A | non_coding_transcript_exon_variant | 0.25 | linezolid | |
| rrl | 1476573 | n.2916A>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476577 | n.2920T>G | non_coding_transcript_exon_variant | 0.15 | linezolid | |
| rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.39 | linezolid | |
| rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.14 | linezolid | |
| rrl | 1476595 | n.2938C>A | non_coding_transcript_exon_variant | 0.1 | linezolid | |
| rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.11 | linezolid | |
| tlyA | 1917972 | c.33A>G | synonymous_variant | 0.11 | capreomycin | |
| fprA | 3475159 | p.Asn385Asp | missense_variant | 0.11 | capreomycin | Uncertain significance |
| amikacin | Uncertain significance | |||||
| embA | 4242970 | c.-263C>T | upstream_gene_variant | 0.11 | ethambutol | |
| embB | 4246548 | p.Pro12Gln | missense_variant | 0.12 | ethambutol | Uncertain significance |
| embB | 4246551 | p.Asn13Ser | missense_variant | 0.11 | ethambutol | Uncertain significance |
| embB | 4246555 | c.42G>C | synonymous_variant | 0.11 | ethambutol | |
| embB | 4246556 | p.Ala15Pro | missense_variant | 0.11 | ethambutol | Uncertain significance |
| embB | 4247024 | p.Pro171Ala | missense_variant | 0.17 | ethambutol | |
| whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 0.13 | streptomycin | Uncertain significance |
| capreomycin | Uncertain significance | |||||
| amikacin | Uncertain significance |
