TB-Profiler result

Run: 156c936b-b84a-44bf-bd2a-425c20256689
Summary

Run ID: 156c936b-b84a-44bf-bd2a-425c20256689

Sample name:

Date: 30-08-2023 09:41:27

Number of reads: 243462

Percentage reads mapped: 59.57

Median coverage: 9

Strain: lineage3.1.1

Spoligotype:

Drug-resistance: Other

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage3 East-African-Indian RD750 0.98
lineage3.1 East-African-Indian RD750 1.0
lineage3.1.1 East-African-Indian RD750 1.0
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
moxifloxacin gyrB p.Asn499Asp Assoc w R - interim
gyrA p.Ala90Val Assoc w R
p.Ser91Pro Assoc w R
levofloxacin gyrB p.Asn499Asp Assoc w R - interim
gyrA p.Ala90Val Assoc w R
p.Ser91Pro Assoc w R
bedaquiline
delamanid
pretomanid
linezolid
streptomycin rpsL p.Lys43Arg Assoc w R
rrs n.462C>T Uncertain significance
n.799C>T Uncertain significance
amikacin
kanamycin
capreomycin
clofazimine
ethionamide
para-aminosalicylic_acid
cycloserine
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
gyrB 6734 p.Asn499Asp missense_variant 0.18 ofloxacin Uncertain significance
moxifloxacin Assoc w R - interim
levofloxacin Assoc w R - interim
fluoroquinolones Uncertain significance
ciprofloxacin Uncertain significance
gyrA 7570 p.Ala90Val missense_variant 0.4 ofloxacin Uncertain significance
moxifloxacin Assoc w R
levofloxacin Assoc w R
fluoroquinolones Uncertain significance
ciprofloxacin Uncertain significance
gyrA 7572 p.Ser91Pro missense_variant 0.2 ofloxacin Uncertain significance
moxifloxacin Assoc w R
levofloxacin Assoc w R
fluoroquinolones Uncertain significance
ciprofloxacin Uncertain significance
rpsL 781687 p.Lys43Arg missense_variant 1.0 streptomycin Assoc w R
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.11 streptomycin Uncertain significance
rrs 1472644 n.799C>T non_coding_transcript_exon_variant 0.58 streptomycin Uncertain significance
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrB 5753 p.Arg172Trp missense_variant 0.17 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrB 6689 p.Lys484* stop_gained 0.17 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
fgd1 490835 p.Arg18His missense_variant 0.12 delamanid
fgd1 491742 c.960T>C synonymous_variant 1.0 delamanid
rpoB 759746 c.-61C>T upstream_gene_variant 1.0 rifampicin Uncertain significance
rpoB 762101 c.2295C>G synonymous_variant 0.2 rifampicin
rpoB 762114 p.Ile770Val missense_variant 0.27 rifampicin
rpoB 762122 p.Asp772Glu missense_variant 0.25 rifampicin
rpoB 762128 c.2322G>C synonymous_variant 0.25 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.25 rifampicin
rpoB 762134 c.2328C>G synonymous_variant 0.25 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.3 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.36 rifampicin
rpoB 762158 c.2352G>C synonymous_variant 0.36 rifampicin
rpoB 762167 c.2361T>C synonymous_variant 0.18 rifampicin
rpoB 762185 c.2379G>C synonymous_variant 0.25 rifampicin
rpoB 762194 c.2388G>C synonymous_variant 0.23 rifampicin
rpoB 762234 p.Pro810Ser missense_variant 0.3 rifampicin
rpoB 762245 c.2439G>C synonymous_variant 0.4 rifampicin
rpoB 762254 c.2448T>C synonymous_variant 0.4 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.3 rifampicin
rpoB 762266 c.2460T>G synonymous_variant 0.27 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.2 rifampicin
rpoB 762293 c.2487T>C synonymous_variant 0.18 rifampicin
rpoB 762296 c.2490G>C synonymous_variant 0.18 rifampicin
rpoC 762989 c.-381G>C upstream_gene_variant 0.4 rifampicin
rpoC 762995 c.-375G>C upstream_gene_variant 0.4 rifampicin
rpoB 763005 p.Cys1067Val missense_variant 0.33 rifampicin
rpoB 763014 p.Met1070Leu missense_variant 0.23 rifampicin
rpoB 763017 p.Gln1071Glu missense_variant 0.23 rifampicin
rpoC 763028 c.-342T>C upstream_gene_variant 0.31 rifampicin
rpoC 763031 c.-339T>C upstream_gene_variant 0.92 rifampicin
rpoB 763038 p.Thr1078Ala missense_variant 0.21 rifampicin
rpoC 763043 c.-327G>C upstream_gene_variant 0.21 rifampicin
rpoC 763052 c.-318G>C upstream_gene_variant 0.19 rifampicin
rpoC 763053 c.-317T>C upstream_gene_variant 0.25 rifampicin
rpoC 763058 c.-312C>G upstream_gene_variant 0.19 rifampicin
rpoC 763070 c.-300T>C upstream_gene_variant 0.19 rifampicin
rpoB 763074 p.Thr1090Val missense_variant 0.24 rifampicin
rpoB 763077 p.Val1091Thr missense_variant 0.19 rifampicin
rpoC 763088 c.-282C>G upstream_gene_variant 0.25 rifampicin
rpoC 763094 c.-276G>C upstream_gene_variant 0.25 rifampicin
rpoC 763103 c.-267G>C upstream_gene_variant 0.2 rifampicin
rpoC 763115 c.-255T>C upstream_gene_variant 0.18 rifampicin
rpoC 764406 p.Arg346Met missense_variant 0.12 rifampicin
rpoC 764512 c.1143G>C synonymous_variant 0.21 rifampicin
rpoC 764518 c.1149C>T synonymous_variant 0.21 rifampicin
rpoC 764521 c.1152T>C synonymous_variant 0.33 rifampicin
rpoC 764536 c.1167G>T synonymous_variant 0.31 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 0.31 rifampicin
rpoC 764542 c.1173C>T synonymous_variant 0.23 rifampicin
rpoC 764548 c.1179G>C synonymous_variant 0.31 rifampicin
rpoC 764563 c.1194G>A synonymous_variant 0.27 rifampicin
rpoC 764566 c.1197C>G synonymous_variant 0.33 rifampicin
rpoC 764572 c.1203G>T synonymous_variant 0.25 rifampicin
rpoC 764575 c.1206T>G synonymous_variant 0.27 rifampicin
rpoC 764578 c.1209C>T synonymous_variant 0.27 rifampicin
rpoC 764581 c.1212T>C synonymous_variant 0.33 rifampicin
rpoC 764582 c.1213C>T synonymous_variant 0.27 rifampicin
rpoC 764605 c.1236G>T synonymous_variant 0.27 rifampicin
rpoC 764611 c.1242G>C synonymous_variant 0.36 rifampicin
rpoC 764618 c.1249C>T synonymous_variant 0.27 rifampicin
rpoC 764623 c.1254C>G synonymous_variant 0.27 rifampicin
rpoC 764626 c.1257C>T synonymous_variant 0.27 rifampicin
rpoC 764632 c.1263T>C synonymous_variant 0.33 rifampicin
rpoC 764635 c.1266C>G synonymous_variant 0.25 rifampicin
rpoC 764644 c.1275G>C synonymous_variant 0.36 rifampicin
rpoC 764650 c.1281G>T synonymous_variant 0.25 rifampicin
rpoC 764653 c.1284G>C synonymous_variant 0.17 rifampicin
rpoC 764656 c.1287C>T synonymous_variant 0.17 rifampicin
rpoC 764659 c.1290C>T synonymous_variant 0.17 rifampicin
rpoC 764660 p.Val431Ile missense_variant 0.17 rifampicin
rpoC 764677 c.1308C>G synonymous_variant 0.27 rifampicin
rpoC 764687 p.Gln440Glu missense_variant 0.17 rifampicin
rpoC 764692 c.1323C>T synonymous_variant 0.17 rifampicin
rpoC 764701 c.1332C>G synonymous_variant 0.27 rifampicin
rpoC 764706 p.Leu446Gln missense_variant 0.25 rifampicin
rpoC 764805 p.Gln479Pro missense_variant 0.3 rifampicin
rpoC 764812 c.1443C>G synonymous_variant 0.27 rifampicin
rpoC 764815 c.1446A>G synonymous_variant 0.27 rifampicin
rpoC 764817 p.Val483Gly missense_variant 0.75 rifampicin
rpoC 764824 c.1455T>C synonymous_variant 0.25 rifampicin
rpoC 764827 c.1458G>C synonymous_variant 0.2 rifampicin
rpoC 764831 p.Glu488Ser missense_variant 0.2 rifampicin
rpoC 764844 p.Ala492Gly missense_variant 0.2 rifampicin
rpoC 764858 c.1489T>C synonymous_variant 0.23 rifampicin
rpoC 764863 c.1494G>C synonymous_variant 0.25 rifampicin
rpoC 764872 c.1503A>G synonymous_variant 0.18 rifampicin
rpoC 764878 c.1509C>G synonymous_variant 0.18 rifampicin
rpoC 764887 c.1518G>C synonymous_variant 0.2 rifampicin
rpoC 764888 c.1519T>C synonymous_variant 0.2 rifampicin
rpoC 764893 c.1524T>C synonymous_variant 0.18 rifampicin
rpoC 764902 c.1533C>G synonymous_variant 0.17 rifampicin
rpoC 766860 p.Arg1164Leu missense_variant 0.18 rifampicin
mmpL5 776332 c.2149C>A synonymous_variant 0.17 clofazimine
bedaquiline
mmpL5 779295 c.-815A>T upstream_gene_variant 0.13 clofazimine
bedaquiline
mmpR5 779342 c.354_355delTG frameshift_variant 0.12 clofazimine
bedaquiline
mmpL5 779352 c.-872C>T upstream_gene_variant 0.11 clofazimine
bedaquiline
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Uncertain significance
fbiC 1304245 p.Asp439Asn missense_variant 0.2 delamanid
Rv1258c 1407466 c.-126G>T upstream_gene_variant 0.2 streptomycin
pyrazinamide
isoniazid
rrs 1472069 n.224G>A non_coding_transcript_exon_variant 0.17 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.15 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472078 n.233C>T non_coding_transcript_exon_variant 0.38 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.25 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.5 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472123 n.278A>G non_coding_transcript_exon_variant 0.25 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472150 n.305T>G non_coding_transcript_exon_variant 0.38 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472151 n.306C>A non_coding_transcript_exon_variant 0.27 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.25 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.27 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.43 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472278 n.433C>T non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472279 n.434T>C non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472285 n.440A>G non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472287 n.442C>T non_coding_transcript_exon_variant 0.44 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.44 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.44 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472293 n.448C>A non_coding_transcript_exon_variant 0.32 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.44 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.44 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472327 n.482G>A non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472330 n.485G>T non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472338 n.493A>G non_coding_transcript_exon_variant 0.32 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.4 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472379 n.534T>C non_coding_transcript_exon_variant 0.22 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472382 n.537G>A non_coding_transcript_exon_variant 0.24 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472400 n.555C>T non_coding_transcript_exon_variant 0.21 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472412 n.567A>G non_coding_transcript_exon_variant 0.14 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.21 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472426 n.581T>C non_coding_transcript_exon_variant 0.23 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472434 n.589_590insC non_coding_transcript_exon_variant 0.14 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472437 n.592T>C non_coding_transcript_exon_variant 0.13 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472438 n.594delC non_coding_transcript_exon_variant 0.14 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.12 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472448 n.603T>G non_coding_transcript_exon_variant 0.12 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472450 n.605A>G non_coding_transcript_exon_variant 0.18 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472451 n.606C>G non_coding_transcript_exon_variant 0.18 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472456 n.611T>C non_coding_transcript_exon_variant 0.12 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.12 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 0.18 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472462 n.617T>C non_coding_transcript_exon_variant 0.18 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472464 n.619A>C non_coding_transcript_exon_variant 0.12 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472467 n.622G>C non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472471 n.626G>A non_coding_transcript_exon_variant 0.17 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472473 n.628G>T non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472474 n.629C>G non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472476 n.631A>G non_coding_transcript_exon_variant 0.19 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.1 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472494 n.649A>G non_coding_transcript_exon_variant 0.21 linezolid
kanamycin Uncertain significance
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472496 n.651T>G non_coding_transcript_exon_variant 0.22 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472504 n.659A>T non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472505 n.660G>A non_coding_transcript_exon_variant 0.11 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.23 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472558 n.713G>A non_coding_transcript_exon_variant 0.24 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472569 n.724G>A non_coding_transcript_exon_variant 0.28 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472573 n.728C>T non_coding_transcript_exon_variant 0.28 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472574 n.729T>A non_coding_transcript_exon_variant 0.28 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472581 n.736A>C non_coding_transcript_exon_variant 0.19 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472584 n.739A>T non_coding_transcript_exon_variant 0.5 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472607 n.762G>A non_coding_transcript_exon_variant 0.5 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472612 n.767G>T non_coding_transcript_exon_variant 0.22 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472655 n.810G>T non_coding_transcript_exon_variant 0.39 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 0.5 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.5 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.6 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472790 n.945T>C non_coding_transcript_exon_variant 0.67 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 0.5 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472825 n.980G>A non_coding_transcript_exon_variant 0.42 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.75 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472836 n.991G>A non_coding_transcript_exon_variant 0.75 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472840 n.995A>C non_coding_transcript_exon_variant 0.75 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472844 n.999C>A non_coding_transcript_exon_variant 0.62 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472844 n.999C>T non_coding_transcript_exon_variant 0.57 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472845 n.1000G>A non_coding_transcript_exon_variant 0.62 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472845 n.1000G>C non_coding_transcript_exon_variant 0.57 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472846 n.1001C>G non_coding_transcript_exon_variant 0.2 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.42 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.42 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472859 n.1014G>T non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472861 n.1016G>T non_coding_transcript_exon_variant 0.57 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472867 n.1023dupT non_coding_transcript_exon_variant 0.57 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472873 n.1028C>T non_coding_transcript_exon_variant 0.42 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472874 n.1029C>T non_coding_transcript_exon_variant 0.33 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472875 n.1030T>G non_coding_transcript_exon_variant 0.75 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.81 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.85 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.41 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.71 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472958 n.1113A>G non_coding_transcript_exon_variant 0.35 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin Uncertain significance
rrs 1472974 n.1129A>T non_coding_transcript_exon_variant 0.35 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472977 n.1133dupT non_coding_transcript_exon_variant 0.5 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.7 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.35 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.62 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.38 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.38 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.38 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473080 n.1235C>T non_coding_transcript_exon_variant 0.13 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473089 n.1244A>C non_coding_transcript_exon_variant 0.16 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473091 n.1246G>C non_coding_transcript_exon_variant 0.16 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473094 n.1249T>A non_coding_transcript_exon_variant 0.18 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473099 n.1254T>C non_coding_transcript_exon_variant 0.17 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.17 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473102 n.1257C>T non_coding_transcript_exon_variant 0.17 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.53 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.37 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.53 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.53 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473120 n.1275C>G non_coding_transcript_exon_variant 0.16 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.53 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473122 n.1277T>A non_coding_transcript_exon_variant 0.37 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473123 n.1278A>G non_coding_transcript_exon_variant 0.15 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1473132 n.1287T>C non_coding_transcript_exon_variant 0.16 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473135 n.1290C>T non_coding_transcript_exon_variant 0.16 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.62 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.61 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473221 n.1376C>T non_coding_transcript_exon_variant 0.42 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473252 n.1407T>C non_coding_transcript_exon_variant 0.42 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473259 n.1414C>T non_coding_transcript_exon_variant 0.16 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.56 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473283 n.1438T>C non_coding_transcript_exon_variant 0.5 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.38 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473315 n.1470T>C non_coding_transcript_exon_variant 0.2 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473316 n.1471C>T non_coding_transcript_exon_variant 0.14 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473346 n.1501G>C non_coding_transcript_exon_variant 0.17 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrl 1474163 n.506C>T non_coding_transcript_exon_variant 0.1 linezolid
rrl 1474164 n.507C>T non_coding_transcript_exon_variant 0.1 linezolid
rrl 1474181 n.524C>A non_coding_transcript_exon_variant 0.16 linezolid
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.17 linezolid
rrl 1474184 n.527C>T non_coding_transcript_exon_variant 0.21 linezolid
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.17 linezolid
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.2 linezolid Uncertain significance
rrl 1474202 n.545T>A non_coding_transcript_exon_variant 0.22 linezolid
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.29 linezolid
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474264 n.607T>G non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474265 n.608G>A non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.38 linezolid Uncertain significance
rrl 1474281 n.624A>G non_coding_transcript_exon_variant 0.29 linezolid
rrl 1474290 n.633T>A non_coding_transcript_exon_variant 0.25 linezolid
rrl 1474293 n.636T>G non_coding_transcript_exon_variant 0.22 linezolid
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.25 linezolid
rrl 1474316 n.659T>C non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 0.38 linezolid
rrl 1474351 n.694G>T non_coding_transcript_exon_variant 0.36 linezolid
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.4 linezolid
rrl 1474359 n.702C>G non_coding_transcript_exon_variant 0.36 linezolid
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474406 n.749T>C non_coding_transcript_exon_variant 0.2 linezolid
rrl 1474483 n.826C>G non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474495 n.838G>A non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474498 n.841G>T non_coding_transcript_exon_variant 0.29 linezolid
rrl 1474505 n.848C>G non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474508 n.851C>T non_coding_transcript_exon_variant 0.36 linezolid
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 0.4 linezolid
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 0.47 linezolid
rrl 1474551 n.894G>C non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.53 linezolid
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.53 linezolid
rrl 1474628 n.971C>T non_coding_transcript_exon_variant 0.53 linezolid
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.57 linezolid
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.62 linezolid
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.62 linezolid
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.62 linezolid
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.62 linezolid
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.53 linezolid
rrl 1474692 n.1035G>A non_coding_transcript_exon_variant 0.6 linezolid
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474717 n.1060_1061insGTGAG non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474721 n.1064G>A non_coding_transcript_exon_variant 0.43 linezolid
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 0.53 linezolid
rrl 1474736 n.1079C>T non_coding_transcript_exon_variant 0.12 linezolid
rrl 1474740 n.1083G>C non_coding_transcript_exon_variant 0.41 linezolid
rrl 1474747 n.1090C>G non_coding_transcript_exon_variant 0.39 linezolid
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 0.5 linezolid
rrl 1474751 n.1094G>A non_coding_transcript_exon_variant 0.11 linezolid
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 0.56 linezolid
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.59 linezolid
rrl 1474777 n.1120T>C non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 0.33 linezolid
rrl 1474784 n.1127C>T non_coding_transcript_exon_variant 0.2 linezolid
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.5 linezolid
rrl 1474798 n.1141C>G non_coding_transcript_exon_variant 0.22 linezolid
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.19 linezolid
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 0.57 linezolid
rrl 1474824 n.1167A>G non_coding_transcript_exon_variant 0.24 linezolid
rrl 1474825 n.1168G>A non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 0.32 linezolid
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.21 linezolid
rrl 1474831 n.1174A>C non_coding_transcript_exon_variant 0.38 linezolid
rrl 1474837 n.1180A>G non_coding_transcript_exon_variant 0.21 linezolid
rrl 1474864 n.1207C>T non_coding_transcript_exon_variant 0.23 linezolid
rrl 1474896 n.1239A>G non_coding_transcript_exon_variant 0.21 linezolid
rrl 1474901 n.1244A>G non_coding_transcript_exon_variant 0.18 linezolid
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 0.5 linezolid
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.47 linezolid
rrl 1474917 n.1260G>T non_coding_transcript_exon_variant 0.28 linezolid
rrl 1474918 n.1261T>C non_coding_transcript_exon_variant 0.28 linezolid
rrl 1474921 n.1264C>T non_coding_transcript_exon_variant 0.17 linezolid Uncertain significance
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 0.2 linezolid
rrl 1475655 n.1998T>G non_coding_transcript_exon_variant 0.2 linezolid
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.27 linezolid
rrl 1475672 n.2015C>T non_coding_transcript_exon_variant 0.14 linezolid
rrl 1475673 n.2016T>C non_coding_transcript_exon_variant 0.14 linezolid
rrl 1475688 n.2031G>A non_coding_transcript_exon_variant 0.15 linezolid
rrl 1475696 n.2039T>A non_coding_transcript_exon_variant 0.14 linezolid
rrl 1475703 n.2046A>T non_coding_transcript_exon_variant 0.12 linezolid
rrl 1475704 n.2047C>T non_coding_transcript_exon_variant 0.12 linezolid
rrl 1475713 n.2056C>T non_coding_transcript_exon_variant 0.19 linezolid
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.54 linezolid
rrl 1475776 n.2119G>C non_coding_transcript_exon_variant 0.33 linezolid
rrl 1475883 n.2226A>C non_coding_transcript_exon_variant 0.62 linezolid
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.65 linezolid
rrl 1475892 n.2235A>G non_coding_transcript_exon_variant 0.48 linezolid
rrl 1475896 n.2239A>G non_coding_transcript_exon_variant 0.47 linezolid
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.67 linezolid
rrl 1475898 n.2241A>G non_coding_transcript_exon_variant 0.53 linezolid
rrl 1475899 n.2242G>A non_coding_transcript_exon_variant 0.53 linezolid
rrl 1475900 n.2243A>G non_coding_transcript_exon_variant 0.12 linezolid
rrl 1475902 n.2245T>C non_coding_transcript_exon_variant 0.13 linezolid
rrl 1475906 n.2249C>T non_coding_transcript_exon_variant 0.12 linezolid Uncertain significance
rrl 1475937 n.2280A>T non_coding_transcript_exon_variant 0.67 linezolid
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 0.71 linezolid
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.71 linezolid
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 0.63 linezolid
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.83 linezolid
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.83 linezolid
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.85 linezolid Uncertain significance
rrl 1475993 n.2336C>T non_coding_transcript_exon_variant 0.24 linezolid Uncertain significance
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 0.55 linezolid
rrl 1476024 n.2367T>C non_coding_transcript_exon_variant 0.4 linezolid
rrl 1476025 n.2368G>T non_coding_transcript_exon_variant 0.27 linezolid
rrl 1476026 n.2369T>A non_coding_transcript_exon_variant 0.27 linezolid
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.67 linezolid
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.55 linezolid
rrl 1476033 n.2376T>A non_coding_transcript_exon_variant 0.27 linezolid
rrl 1476034 n.2377C>T non_coding_transcript_exon_variant 0.67 linezolid
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.67 linezolid
rrl 1476040 n.2383C>T non_coding_transcript_exon_variant 0.27 linezolid
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.62 linezolid
rrl 1476045 n.2388G>A non_coding_transcript_exon_variant 0.38 linezolid
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.38 linezolid
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.62 linezolid
rrl 1476057 n.2400T>C non_coding_transcript_exon_variant 0.35 linezolid
rrl 1476058 n.2401T>C non_coding_transcript_exon_variant 0.35 linezolid
rrl 1476076 n.2419A>G non_coding_transcript_exon_variant 0.29 linezolid
rrl 1476080 n.2423T>G non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476082 n.2425T>C non_coding_transcript_exon_variant 0.3 linezolid
rrl 1476085 n.2428G>C non_coding_transcript_exon_variant 0.4 linezolid
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.35 linezolid
rrl 1476097 n.2440C>T non_coding_transcript_exon_variant 0.22 linezolid
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.5 linezolid
rrl 1476100 n.2443A>C non_coding_transcript_exon_variant 0.31 linezolid
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.36 linezolid
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 0.5 linezolid
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.36 linezolid
rrl 1476113 n.2456T>G non_coding_transcript_exon_variant 0.31 linezolid
rrl 1476114 n.2457T>C non_coding_transcript_exon_variant 0.28 linezolid Uncertain significance
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.28 linezolid
rrl 1476116 n.2459A>G non_coding_transcript_exon_variant 0.22 linezolid
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.56 linezolid
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.6 linezolid
rrl 1476179 n.2522C>T non_coding_transcript_exon_variant 0.38 linezolid
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 0.6 linezolid Uncertain significance
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 0.6 linezolid
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.6 linezolid
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.33 linezolid
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.31 linezolid
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.76 linezolid
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.81 linezolid
rrl 1476251 n.2594T>A non_coding_transcript_exon_variant 0.29 linezolid
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.76 linezolid
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 0.67 linezolid
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.56 linezolid
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.76 linezolid Uncertain significance
rrl 1476279 n.2622G>A non_coding_transcript_exon_variant 0.41 linezolid
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.76 linezolid
rrl 1476294 n.2637A>G non_coding_transcript_exon_variant 0.41 linezolid
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 0.41 linezolid
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 0.41 linezolid
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 0.64 linezolid
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.6 linezolid
rrl 1476298 n.2641C>A non_coding_transcript_exon_variant 0.6 linezolid
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 0.64 linezolid
rrl 1476300 n.2643G>T non_coding_transcript_exon_variant 0.76 linezolid
rrl 1476301 n.2644A>T non_coding_transcript_exon_variant 0.76 linezolid
rrl 1476307 n.2650A>T non_coding_transcript_exon_variant 0.37 linezolid
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 0.54 linezolid
rrl 1476309 n.2652G>T non_coding_transcript_exon_variant 0.54 linezolid
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 0.35 linezolid
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 0.35 linezolid
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.43 linezolid
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.34 linezolid
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.58 linezolid
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.36 linezolid Uncertain significance
rrl 1476481 n.2824T>C non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.41 linezolid
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.37 linezolid
rrl 1476535 n.2878G>A non_coding_transcript_exon_variant 0.21 linezolid
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 0.34 linezolid
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.34 linezolid
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 0.34 linezolid Uncertain significance
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 0.55 linezolid
rrl 1476573 n.2916A>T non_coding_transcript_exon_variant 0.21 linezolid
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 0.19 linezolid
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.45 linezolid
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 0.45 linezolid
rrl 1476592 n.2935G>A non_coding_transcript_exon_variant 0.14 linezolid
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.29 linezolid
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.3 linezolid
rrl 1476605 n.2948C>T non_coding_transcript_exon_variant 0.1 linezolid
rrl 1476607 n.2950C>T non_coding_transcript_exon_variant 0.42 linezolid
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.32 linezolid
rrl 1476614 n.2957A>T non_coding_transcript_exon_variant 0.37 linezolid
rrl 1476616 n.2959A>G non_coding_transcript_exon_variant 0.37 linezolid
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.37 linezolid
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.33 linezolid
rrl 1476629 n.2972C>A non_coding_transcript_exon_variant 0.33 linezolid
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 0.33 linezolid
rrl 1476661 n.3004A>G non_coding_transcript_exon_variant 0.27 linezolid
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476668 n.3011C>T non_coding_transcript_exon_variant 0.25 linezolid
rrl 1476675 n.3018C>G non_coding_transcript_exon_variant 0.25 linezolid
rpsA 1833708 p.Gly56Asp missense_variant 0.18 pyrazinamide
rpsA 1834261 c.720A>G synonymous_variant 0.12 pyrazinamide
rpsA 1834264 c.723G>C synonymous_variant 0.12 pyrazinamide
rpsA 1834286 p.Ser249Asn missense_variant 0.12 pyrazinamide
rpsA 1834292 p.Val251Ile missense_variant 0.14 pyrazinamide
rpsA 1834298 p.Gln253Glu missense_variant 0.12 pyrazinamide
rpsA 1834303 c.762T>C synonymous_variant 0.12 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.13 pyrazinamide
rpsA 1834307 p.Asp256Gln missense_variant 0.13 pyrazinamide
rpsA 1834327 c.786G>T synonymous_variant 0.2 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.25 pyrazinamide
rpsA 1834354 c.813G>T synonymous_variant 0.25 pyrazinamide
rpsA 1834357 c.816T>C synonymous_variant 0.25 pyrazinamide
rpsA 1834360 c.819G>C synonymous_variant 0.25 pyrazinamide
rpsA 1834361 c.820T>C synonymous_variant 0.25 pyrazinamide
rpsA 1834366 c.825A>G synonymous_variant 0.27 pyrazinamide
rpsA 1834378 c.837T>G synonymous_variant 0.27 pyrazinamide
rpsA 1834384 c.843A>G synonymous_variant 0.27 pyrazinamide
rpsA 1834395 p.Arg285Gln missense_variant 0.27 pyrazinamide
rpsA 1834397 p.His286Ala missense_variant 0.2 pyrazinamide
rpsA 1834411 c.870T>G synonymous_variant 0.2 pyrazinamide
rpsA 1834417 c.876G>C synonymous_variant 0.27 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.27 pyrazinamide
rpsA 1834427 p.Ile296Val missense_variant 0.27 pyrazinamide
rpsA 1834435 c.894G>C synonymous_variant 0.3 pyrazinamide
PPE35 2169023 c.1590G>T synonymous_variant 0.25 pyrazinamide
pncA 2289365 c.-125delC upstream_gene_variant 1.0 pyrazinamide
ahpC 2726105 c.-88G>A upstream_gene_variant 1.0 isoniazid Uncertain significance
ald 3087065 c.246C>T synonymous_variant 0.11 cycloserine
fbiA 3640450 c.-93T>A upstream_gene_variant 0.13 delamanid
fbiA 3640639 p.Ala33Thr missense_variant 0.15 delamanid
rpoA 3878155 p.Val118Ala missense_variant 0.15 rifampicin
ddn 3986857 p.Pro5Gln missense_variant 0.2 delamanid
embC 4239907 c.45A>T synonymous_variant 0.2 ethambutol
embA 4242643 c.-590C>T upstream_gene_variant 1.0 ethambutol
ethA 4326231 p.Asp415Asn missense_variant 0.12 ethionamide
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 streptomycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
gid 4407588 c.615A>G synonymous_variant 1.0 streptomycin