TB-Profiler result

Run: b8fcfba9-4f96-4c4a-8a66-7ad4e37c330f

Summary

Run ID: b8fcfba9-4f96-4c4a-8a66-7ad4e37c330f

Sample name:

Date: 14-07-2023 20:39:59

Number of reads: 627481

Percentage reads mapped: 13.41

Median coverage: 0

Strain: lineage4.8.2;lineage4.3.1

Spoligotype:

Drug-resistance: Sensitive


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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4 Euro-American None 0.05
lineage4.8.2 Euro-American (mainly T) RD219 0.83
lineage4.3.1 Euro-American (LAM) None 0.78
lineage3.1.2.2 East-African-Indian RD750 0.77
lineage1.1.3.1 Indo-Oceanic RD239 0.72
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
moxifloxacin
levofloxacin
bedaquiline
delamanid
pretomanid
linezolid
streptomycin
amikacin
kanamycin
capreomycin
clofazimine
ethionamide
para-aminosalicylic_acid
cycloserine
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrB 6798 p.Gly520Ala missense_variant 0.9 fluoroquinolones
moxifloxacin Uncertain significance
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 6808 c.-494C>T upstream_gene_variant 0.91 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 6811 c.-491C>T upstream_gene_variant 0.91 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7406 c.105G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7412 c.111C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7433 c.132G>A synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7442 c.141G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7457 c.156T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7463 c.162G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7472 c.171T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7475 c.174A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7480 p.Phe60Tyr missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 7484 c.183T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7499 c.198G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7526 c.225G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7532 c.231T>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7541 c.240C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7547 c.246C>T synonymous_variant 0.93 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7565 c.264C>T synonymous_variant 0.93 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7569 p.Ala90Ser missense_variant 0.93 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7585 p.Ser95Thr missense_variant 1.0 fluoroquinolones
moxifloxacin Uncertain significance
levofloxacin Uncertain significance
ciprofloxacin
ofloxacin
gyrA 7592 c.291G>C synonymous_variant 0.7 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7595 c.294C>G synonymous_variant 0.7 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7613 c.312G>A synonymous_variant 0.6 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7622 c.321C>T synonymous_variant 0.67 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7631 c.330G>C synonymous_variant 0.67 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7637 c.336C>T synonymous_variant 0.67 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.82 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7763 c.462T>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7775 c.474C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7784 c.483A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7790 c.489G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7796 c.495G>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7799 c.498A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7802 c.501C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7832 c.531G>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7835 c.534A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7841 c.540C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7847 c.546G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7859 c.558A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 7865 c.564T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8504 c.1203G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8513 c.1212C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8516 c.1215T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8519 c.1218A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8520 c.1219C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8535 p.Glu412Gln missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8546 p.Asp415Glu missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8561 c.1260A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8571 c.1270C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8603 c.1302A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8619 c.1318T>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8624 c.1323G>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8627 c.1326C>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8633 c.1332C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8636 c.1335A>C synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8645 c.1344C>A synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8649 p.Arg450Lys missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8655 p.Ile452Val missense_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8663 c.1362C>T synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8672 c.1371A>G synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
gyrA 8678 c.1377G>A synonymous_variant 1.0 fluoroquinolones
moxifloxacin
levofloxacin
ciprofloxacin
ofloxacin
fgd1 491490 c.708C>T synonymous_variant 1.0 delamanid
fgd1 491499 c.717G>C synonymous_variant 1.0 delamanid
fgd1 491508 c.726A>G synonymous_variant 1.0 delamanid
fgd1 491512 p.Asn244Glu missense_variant 1.0 delamanid
fgd1 491530 p.Ala250Ser missense_variant 0.12 delamanid
fgd1 491536 c.754C>T synonymous_variant 1.0 delamanid
fgd1 491542 c.760T>C synonymous_variant 1.0 delamanid
fgd1 491547 c.765A>T synonymous_variant 1.0 delamanid
fgd1 491548 p.Ala256Pro missense_variant 1.0 delamanid
fgd1 491562 c.780C>T synonymous_variant 1.0 delamanid
fgd1 491563 c.781_783delAGCinsTCG synonymous_variant 1.0 delamanid
fgd1 491571 c.789C>T synonymous_variant 1.0 delamanid
fgd1 491595 c.813C>T synonymous_variant 1.0 delamanid
fgd1 491610 c.828A>G synonymous_variant 1.0 delamanid
fgd1 491616 c.834A>G synonymous_variant 1.0 delamanid
fgd1 491620 p.Ile280Val missense_variant 1.0 delamanid
mshA 575705 c.358T>C synonymous_variant 0.9 ethionamide
isoniazid
mshA 575725 c.378C>G synonymous_variant 0.92 ethionamide
isoniazid
mshA 575734 c.387T>G synonymous_variant 0.93 ethionamide
isoniazid
mshA 575744 p.Ala133Thr missense_variant 0.93 ethionamide
isoniazid
mshA 575749 c.402C>A synonymous_variant 0.94 ethionamide
isoniazid
mshA 575764 c.417C>G synonymous_variant 0.94 ethionamide
isoniazid
mshA 575771 p.Val142Thr missense_variant 0.94 ethionamide
isoniazid
mshA 575776 c.429C>T synonymous_variant 0.94 ethionamide
isoniazid
mshA 575782 c.435G>C synonymous_variant 0.94 ethionamide
isoniazid
mshA 575785 c.438T>C synonymous_variant 1.0 ethionamide
isoniazid
mshA 575795 p.Ile150Val missense_variant 1.0 ethionamide
isoniazid
mshA 575800 c.453G>C synonymous_variant 1.0 ethionamide
isoniazid
mshA 575803 c.456C>T synonymous_variant 1.0 ethionamide
isoniazid
mshA 575821 c.474G>C synonymous_variant 1.0 ethionamide
isoniazid
mshA 575842 c.495G>C synonymous_variant 1.0 ethionamide
isoniazid
ccsA 620715 c.825C>T synonymous_variant 1.0 capreomycin
amikacin
rpoB 760181 c.375T>C synonymous_variant 1.0 rifampicin
rpoB 760184 c.378A>G synonymous_variant 1.0 rifampicin
rpoB 760196 c.390C>G synonymous_variant 1.0 rifampicin
rpoB 760235 c.429T>C synonymous_variant 1.0 rifampicin
rpoB 760244 c.438G>C synonymous_variant 1.0 rifampicin
rpoB 760283 c.477G>C synonymous_variant 1.0 rifampicin
rpoB 760298 c.492G>C synonymous_variant 1.0 rifampicin
rpoB 760310 c.504G>C synonymous_variant 1.0 rifampicin
rpoB 760316 c.510C>G synonymous_variant 1.0 rifampicin
rpoB 760325 c.519G>C synonymous_variant 1.0 rifampicin
rpoB 760357 p.Thr184Ser missense_variant 1.0 rifampicin
rpoB 760361 c.555T>C synonymous_variant 1.0 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 1.0 rifampicin
rpoB 760406 c.600G>C synonymous_variant 1.0 rifampicin
rpoB 760407 p.Ser201Gly missense_variant 1.0 rifampicin
rpoB 760415 c.609C>T synonymous_variant 1.0 rifampicin
rpoB 760424 c.618C>G synonymous_variant 1.0 rifampicin
rpoB 760430 c.624T>C synonymous_variant 1.0 rifampicin
rpoB 760457 c.651C>T synonymous_variant 1.0 rifampicin
rpoB 760463 c.657C>T synonymous_variant 1.0 rifampicin
rpoB 760475 c.669A>G synonymous_variant 1.0 rifampicin
rpoB 760478 c.672C>T synonymous_variant 1.0 rifampicin
rpoB 760481 c.675G>T synonymous_variant 0.92 rifampicin
rpoB 760484 c.678A>G synonymous_variant 0.93 rifampicin
rpoB 760502 c.696C>G synonymous_variant 0.87 rifampicin
rpoB 760522 p.Ser239Asn missense_variant 0.88 rifampicin
rpoB 760532 c.726T>C synonymous_variant 0.83 rifampicin
rpoB 760533 p.Val243Thr missense_variant 0.83 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.85 rifampicin
rpoB 760547 c.741G>C synonymous_variant 0.85 rifampicin
rpoB 760561 c.757_758delCG frameshift_variant 0.82 rifampicin
rpoB 760567 p.Ser254Trp missense_variant 0.82 rifampicin
rpoB 760568 c.762_763insGC frameshift_variant 0.82 rifampicin
rpoB 760571 c.765G>C synonymous_variant 0.82 rifampicin
rpoB 760585 p.Asn260Ser missense_variant 0.83 rifampicin
rpoB 760591 p.Val262Ala missense_variant 0.83 rifampicin Uncertain significance
rpoB 760595 c.789C>T synonymous_variant 0.83 rifampicin
rpoB 760596 p.Thr264Pro missense_variant 0.83 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.88 rifampicin
rpoB 760646 c.840C>G synonymous_variant 1.0 rifampicin
rpoB 760655 c.849A>G synonymous_variant 1.0 rifampicin
rpoB 760661 c.855A>C synonymous_variant 1.0 rifampicin
rpoB 760670 c.864G>C synonymous_variant 1.0 rifampicin
rpoB 760674 c.868T>C synonymous_variant 1.0 rifampicin
rpoB 760679 c.873A>G synonymous_variant 1.0 rifampicin
rpoB 760683 c.877T>C synonymous_variant 1.0 rifampicin
rpoB 760721 c.915C>G synonymous_variant 1.0 rifampicin
rpoB 760724 c.918T>C synonymous_variant 1.0 rifampicin
rpoB 760730 c.924T>C synonymous_variant 1.0 rifampicin
rpoB 760748 c.942C>G synonymous_variant 1.0 rifampicin
rpoB 760751 c.945G>C synonymous_variant 0.94 rifampicin
rpoB 760755 p.His317Asn missense_variant 1.0 rifampicin
rpoB 760759 p.Val318Ala missense_variant 1.0 rifampicin
rpoB 760764 p.Glu320Gln missense_variant 1.0 rifampicin
rpoB 760769 c.963C>G synonymous_variant 1.0 rifampicin
rpoB 760784 c.978G>T synonymous_variant 1.0 rifampicin
rpoB 760793 c.987A>G synonymous_variant 1.0 rifampicin
rpoB 760805 c.999G>C synonymous_variant 1.0 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 1.0 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 1.0 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 1.0 rifampicin
rpoB 760830 c.1024T>C synonymous_variant 1.0 rifampicin
rpoB 760841 c.1035T>C synonymous_variant 1.0 rifampicin
rpoB 760859 c.1053T>C synonymous_variant 1.0 rifampicin
rpoB 760862 c.1056G>C synonymous_variant 1.0 rifampicin
rpoB 760877 c.1071G>C synonymous_variant 1.0 rifampicin
rpoB 760883 c.1077G>C synonymous_variant 1.0 rifampicin
rpoB 760886 c.1080A>G synonymous_variant 1.0 rifampicin
rpoB 760887 p.Thr361Val missense_variant 1.0 rifampicin
rpoB 760910 c.1104C>T synonymous_variant 1.0 rifampicin
rpoB 761180 c.1374A>C synonymous_variant 1.0 rifampicin
rpoB 761189 c.1383T>C synonymous_variant 1.0 rifampicin
rpoB 761195 c.1389G>C synonymous_variant 1.0 rifampicin
rpoB 761198 c.1392G>T synonymous_variant 1.0 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 1.0 rifampicin
rpoB 761217 p.Pro471Ser missense_variant 1.0 rifampicin
rpoB 761234 c.1428G>C synonymous_variant 1.0 rifampicin
rpoB 761249 c.1443A>G synonymous_variant 1.0 rifampicin
rpoB 761261 c.1455G>T synonymous_variant 1.0 rifampicin
rpoB 761264 c.1458C>G synonymous_variant 1.0 rifampicin
rpoB 761282 c.1476C>T synonymous_variant 1.0 rifampicin
rpoB 761288 c.1482G>T synonymous_variant 1.0 rifampicin
rpoB 761318 c.1512G>T synonymous_variant 1.0 rifampicin
rpoB 761552 c.1746G>C synonymous_variant 0.82 rifampicin
rpoB 761555 c.1749G>C synonymous_variant 0.82 rifampicin
rpoB 761558 c.1752C>G synonymous_variant 0.83 rifampicin
rpoB 761570 c.1764T>C synonymous_variant 0.77 rifampicin
rpoB 761573 c.1767C>G synonymous_variant 0.83 rifampicin
rpoB 761579 c.1773G>C synonymous_variant 0.86 rifampicin
rpoB 761600 c.1794T>C synonymous_variant 0.86 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.85 rifampicin
rpoB 761612 c.1806G>T synonymous_variant 0.85 rifampicin
rpoB 761615 c.1809A>C synonymous_variant 0.93 rifampicin
rpoB 761636 c.1830G>T synonymous_variant 1.0 rifampicin
rpoB 761645 c.1839C>G synonymous_variant 1.0 rifampicin
rpoB 761648 c.1842T>C synonymous_variant 1.0 rifampicin
rpoB 761666 c.1860G>C synonymous_variant 1.0 rifampicin
rpoB 761669 c.1863C>T synonymous_variant 1.0 rifampicin
rpoB 761675 c.1869G>T synonymous_variant 1.0 rifampicin
rpoB 761690 c.1884G>C synonymous_variant 1.0 rifampicin
rpoB 761708 c.1902C>T synonymous_variant 1.0 rifampicin
rpoB 761712 p.Val636Ile missense_variant 0.9 rifampicin
rpoB 761718 p.Ala638Ser missense_variant 0.75 rifampicin
rpoB 761722 p.Glu639Gly missense_variant 0.6 rifampicin Uncertain significance
rpoB 761724 p.Glu640Lys missense_variant 0.2 rifampicin
rpoB 761727 p.Ser641Ala missense_variant 0.8 rifampicin
rpoB 761736 p.Ile644Val missense_variant 0.8 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.8 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.8 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.75 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.85 rifampicin
rpoB 761847 p.Cys681Arg missense_variant 0.85 rifampicin Uncertain significance
rpoB 761850 p.Pro682Ser missense_variant 0.15 rifampicin
rpoB 761864 c.2058G>C synonymous_variant 0.92 rifampicin
rpoB 761867 c.2061C>G synonymous_variant 0.92 rifampicin
rpoB 761868 p.Asp688Gln missense_variant 0.92 rifampicin
rpoB 761873 c.2067A>T synonymous_variant 1.0 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 1.0 rifampicin
rpoB 761891 c.2085G>C synonymous_variant 1.0 rifampicin
rpoB 761892 p.Ile696Val missense_variant 1.0 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 1.0 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 1.0 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 1.0 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 1.0 rifampicin Uncertain significance
rpoB 761916 p.Asp704Asn missense_variant 1.0 rifampicin
rpoB 761921 c.2115C>T synonymous_variant 1.0 rifampicin
rpoB 761930 c.2124G>C synonymous_variant 1.0 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 1.0 rifampicin
rpoB 761954 c.2148C>G synonymous_variant 1.0 rifampicin
rpoB 762308 c.2502G>C synonymous_variant 1.0 rifampicin
rpoB 762338 c.2532T>C synonymous_variant 1.0 rifampicin
rpoB 762341 c.2535G>C synonymous_variant 1.0 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 1.0 rifampicin
rpoB 762350 c.2544C>T synonymous_variant 1.0 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 1.0 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 1.0 rifampicin
rpoC 762374 c.-996G>C upstream_gene_variant 1.0 rifampicin
rpoC 762395 c.-975G>C upstream_gene_variant 1.0 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 1.0 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 1.0 rifampicin
rpoC 762404 c.-966T>C upstream_gene_variant 1.0 rifampicin
rpoC 762410 c.-960T>C upstream_gene_variant 1.0 rifampicin
rpoC 762416 c.-954A>G upstream_gene_variant 1.0 rifampicin
rpoC 762434 c.-936T>C upstream_gene_variant 1.0 rifampicin
rpoC 762443 c.-927G>C upstream_gene_variant 1.0 rifampicin
rpoC 762449 c.-921C>A upstream_gene_variant 1.0 rifampicin
rpoC 762452 c.-918G>C upstream_gene_variant 1.0 rifampicin
rpoC 762470 c.-900G>C upstream_gene_variant 0.94 rifampicin
rpoC 762491 c.-879T>C upstream_gene_variant 0.87 rifampicin
rpoC 762509 c.-861T>G upstream_gene_variant 0.85 rifampicin
rpoB 762510 p.Ala902Pro missense_variant 0.85 rifampicin Uncertain significance
rpoC 762515 c.-855C>T upstream_gene_variant 0.85 rifampicin
rpoC 762533 c.-837T>C upstream_gene_variant 0.82 rifampicin
rpoC 762536 c.-834T>C upstream_gene_variant 0.82 rifampicin
rpoC 762537 c.-833T>C upstream_gene_variant 0.82 rifampicin
rpoC 762551 c.-819C>T upstream_gene_variant 0.8 rifampicin
rpoC 762839 c.-531G>A upstream_gene_variant 1.0 rifampicin
rpoC 762857 c.-513C>G upstream_gene_variant 1.0 rifampicin
rpoC 762863 c.-507T>C upstream_gene_variant 1.0 rifampicin
rpoB 762879 p.Met1025Leu missense_variant 1.0 rifampicin
rpoC 762920 c.-450C>T upstream_gene_variant 1.0 rifampicin
rpoC 762929 c.-441G>C upstream_gene_variant 1.0 rifampicin
rpoC 762959 c.-411G>C upstream_gene_variant 1.0 rifampicin
rpoC 762962 c.-408C>T upstream_gene_variant 1.0 rifampicin
rpoC 762995 c.-375G>T upstream_gene_variant 1.0 rifampicin
rpoC 763004 c.-366G>A upstream_gene_variant 1.0 rifampicin
rpoC 763007 c.-363C>T upstream_gene_variant 1.0 rifampicin
rpoC 763028 c.-342T>C upstream_gene_variant 1.0 rifampicin
rpoC 763031 c.-339T>G upstream_gene_variant 1.0 rifampicin
rpoC 763053 c.-317T>C upstream_gene_variant 1.0 rifampicin
rpoC 763070 c.-300T>C upstream_gene_variant 1.0 rifampicin
rpoC 763085 c.-285C>G upstream_gene_variant 1.0 rifampicin
rpoC 763103 c.-267G>C upstream_gene_variant 1.0 rifampicin
rpoC 763115 c.-255T>C upstream_gene_variant 1.0 rifampicin
rpoC 763456 c.87A>G synonymous_variant 1.0 rifampicin
rpoC 763468 c.99G>C synonymous_variant 1.0 rifampicin
rpoC 763486 c.117T>C synonymous_variant 1.0 rifampicin
rpoC 763492 c.123G>T synonymous_variant 1.0 rifampicin
rpoC 763528 c.159G>A synonymous_variant 1.0 rifampicin
rpoC 763546 c.177A>G synonymous_variant 1.0 rifampicin
rpoC 763558 c.189C>T synonymous_variant 1.0 rifampicin
rpoC 763570 c.201G>C synonymous_variant 1.0 rifampicin
rpoC 763573 c.204G>C synonymous_variant 1.0 rifampicin
rpoC 763594 c.225C>T synonymous_variant 1.0 rifampicin
rpoC 763603 c.234C>T synonymous_variant 1.0 rifampicin
rpoC 763615 c.246G>C synonymous_variant 1.0 rifampicin
rpoC 763618 c.249C>T synonymous_variant 1.0 rifampicin
rpoC 763633 c.264T>C synonymous_variant 1.0 rifampicin
rpoC 763660 c.291T>G synonymous_variant 1.0 rifampicin
rpoC 763666 c.297G>A synonymous_variant 1.0 rifampicin
rpoC 763675 c.306C>G synonymous_variant 1.0 rifampicin
rpoC 763702 c.333C>G synonymous_variant 1.0 rifampicin
rpoC 763709 c.340C>T synonymous_variant 1.0 rifampicin
rpoC 763714 c.345G>C synonymous_variant 1.0 rifampicin
rpoC 763717 c.348T>C synonymous_variant 1.0 rifampicin
rpoC 763723 c.354G>C synonymous_variant 1.0 rifampicin
rpoC 763732 c.363C>T synonymous_variant 1.0 rifampicin
rpoC 763741 c.372C>T synonymous_variant 1.0 rifampicin
rpoC 763747 c.378G>A synonymous_variant 1.0 rifampicin
rpoC 763765 c.396T>G synonymous_variant 1.0 rifampicin
rpoC 763792 p.Glu141Asp missense_variant 1.0 rifampicin
rpoC 763807 c.438T>C synonymous_variant 1.0 rifampicin
rpoC 763810 c.441G>A synonymous_variant 0.1 rifampicin
rpoC 763813 c.444C>G synonymous_variant 1.0 rifampicin
rpoC 763831 c.462A>G synonymous_variant 1.0 rifampicin
rpoC 763837 c.468G>C synonymous_variant 1.0 rifampicin
rpoC 763840 c.471G>C synonymous_variant 1.0 rifampicin
rpoC 763858 c.489A>G synonymous_variant 1.0 rifampicin
rpoC 763861 c.492C>T synonymous_variant 1.0 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 1.0 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 1.0 rifampicin
rpoC 763879 c.510A>G synonymous_variant 1.0 rifampicin
rpoC 763882 c.513G>A synonymous_variant 1.0 rifampicin
rpoC 763891 c.522G>C synonymous_variant 1.0 rifampicin
rpoC 763894 c.525A>G synonymous_variant 1.0 rifampicin
rpoC 763900 c.531G>C synonymous_variant 1.0 rifampicin
rpoC 763921 c.552G>C synonymous_variant 1.0 rifampicin
rpoC 764254 c.885G>C synonymous_variant 1.0 rifampicin
rpoC 764257 c.888G>C synonymous_variant 1.0 rifampicin
rpoC 764272 c.903G>C synonymous_variant 1.0 rifampicin
rpoC 764278 c.909A>G synonymous_variant 1.0 rifampicin
rpoC 764485 c.1116G>C synonymous_variant 1.0 rifampicin
rpoC 764491 c.1122G>T synonymous_variant 1.0 rifampicin
rpoC 764497 c.1128A>G synonymous_variant 1.0 rifampicin
rpoC 764500 c.1131C>G synonymous_variant 1.0 rifampicin
rpoC 764503 c.1134G>C synonymous_variant 1.0 rifampicin
rpoC 764521 c.1152T>C synonymous_variant 1.0 rifampicin
rpoC 764527 c.1158C>T synonymous_variant 1.0 rifampicin
rpoC 764536 c.1167G>T synonymous_variant 1.0 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 1.0 rifampicin
rpoC 764575 c.1206T>G synonymous_variant 1.0 rifampicin
rpoC 764605 c.1236G>C synonymous_variant 1.0 rifampicin
rpoC 764611 c.1242G>T synonymous_variant 1.0 rifampicin
rpoC 764623 c.1254C>G synonymous_variant 1.0 rifampicin
rpoC 764626 c.1257C>T synonymous_variant 1.0 rifampicin
rpoC 764632 c.1263T>C synonymous_variant 1.0 rifampicin
rpoC 764650 c.1281G>T synonymous_variant 1.0 rifampicin
rpoC 764701 c.1332C>G synonymous_variant 1.0 rifampicin
rpoC 764707 c.1338G>C synonymous_variant 1.0 rifampicin
rpoC 764713 c.1344G>T synonymous_variant 1.0 rifampicin
rpoC 764716 c.1347G>C synonymous_variant 1.0 rifampicin
rpoC 764746 c.1377G>T synonymous_variant 1.0 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 1.0 rifampicin
rpoC 764758 c.1389C>G synonymous_variant 1.0 rifampicin
rpoC 764764 c.1395T>C synonymous_variant 1.0 rifampicin
rpoC 764803 c.1434C>T synonymous_variant 1.0 rifampicin
rpoC 764809 c.1440C>T synonymous_variant 1.0 rifampicin
rpoC 764815 c.1446A>G synonymous_variant 1.0 rifampicin
rpoC 764824 c.1455T>C synonymous_variant 1.0 rifampicin
rpoC 764827 c.1458G>C synonymous_variant 1.0 rifampicin
rpoC 764858 c.1489T>C synonymous_variant 1.0 rifampicin
rpoC 764869 c.1500C>T synonymous_variant 1.0 rifampicin
rpoC 764875 c.1506C>T synonymous_variant 1.0 rifampicin
rpoC 764878 c.1509C>G synonymous_variant 1.0 rifampicin
rpoC 764887 c.1518G>C synonymous_variant 1.0 rifampicin
rpoC 764888 c.1519T>C synonymous_variant 1.0 rifampicin
rpoC 764935 c.1566T>C synonymous_variant 1.0 rifampicin
rpoC 765886 c.2517C>G synonymous_variant 1.0 rifampicin
rpoC 765904 c.2535C>G synonymous_variant 1.0 rifampicin
rpoC 765934 c.2565C>T synonymous_variant 1.0 rifampicin
rpoC 765940 c.2571A>T synonymous_variant 1.0 rifampicin
rpoC 765946 c.2577C>T synonymous_variant 1.0 rifampicin
rpoC 765947 c.2578T>C synonymous_variant 1.0 rifampicin
rpoC 765952 c.2583G>C synonymous_variant 1.0 rifampicin
rpoC 765961 c.2592G>T synonymous_variant 1.0 rifampicin
rpoC 765962 c.2593T>C synonymous_variant 1.0 rifampicin
rpoC 765967 c.2598C>T synonymous_variant 1.0 rifampicin
rpoC 766738 c.3369G>T synonymous_variant 1.0 rifampicin
rpoC 766741 c.3372G>C synonymous_variant 1.0 rifampicin
rpoC 766765 c.3396A>C synonymous_variant 1.0 rifampicin
rpoC 766771 c.3402G>C synonymous_variant 1.0 rifampicin
rpoC 766774 c.3405T>C synonymous_variant 1.0 rifampicin
rpoC 766775 p.Arg1136Lys missense_variant 1.0 rifampicin
rpoC 766798 c.3429C>G synonymous_variant 1.0 rifampicin
rpoC 766981 c.3612T>C synonymous_variant 1.0 rifampicin
rpoC 766996 c.3627C>T synonymous_variant 1.0 rifampicin
rpoC 767002 c.3633G>C synonymous_variant 1.0 rifampicin
rpoC 767008 c.3639G>A synonymous_variant 1.0 rifampicin
rpoC 767020 c.3651C>G synonymous_variant 1.0 rifampicin
rpoC 767098 c.3729T>C synonymous_variant 1.0 rifampicin
rpoC 767104 c.3735C>G synonymous_variant 1.0 rifampicin
rpoC 767105 p.Asn1246Gln missense_variant 1.0 rifampicin
rpoC 767119 c.3750A>G synonymous_variant 1.0 rifampicin
rpoC 767134 c.3765C>T synonymous_variant 1.0 rifampicin
rpoC 767138 c.3769C>T synonymous_variant 1.0 rifampicin
rpoC 767145 p.Pro1259Leu missense_variant 0.13 rifampicin Uncertain significance
rpoC 767158 c.3789T>C synonymous_variant 1.0 rifampicin
rpoC 767162 p.Asn1265Ala missense_variant 1.0 rifampicin
rpoC 767167 c.3798C>T synonymous_variant 1.0 rifampicin
rpoC 767174 p.Asn1269Asp missense_variant 1.0 rifampicin
rpoC 767180 p.Ala1271Gln missense_variant 1.0 rifampicin
rpoC 767191 c.3822C>G synonymous_variant 1.0 rifampicin
rpoC 767197 c.3828G>A synonymous_variant 1.0 rifampicin
mmpL5 775832 p.Ala883Ser missense_variant 0.4 clofazimine
bedaquiline
mmpL5 775835 c.2646C>G synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775838 c.2643G>C synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775847 c.2634G>A synonymous_variant 1.0 clofazimine
bedaquiline
mmpL5 775851 p.Ser877Thr missense_variant 0.55 clofazimine
bedaquiline
mmpL5 775853 c.2628C>T synonymous_variant 0.45 clofazimine
bedaquiline
mmpL5 775856 c.2625T>C synonymous_variant 0.91 clofazimine
bedaquiline
mmpL5 775865 c.2616T>C synonymous_variant 1.0 clofazimine
bedaquiline
mmpL5 775877 c.2604C>G synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775883 p.Ile866Leu missense_variant 0.5 clofazimine
bedaquiline
mmpL5 775886 c.2595A>C synonymous_variant 1.0 clofazimine
bedaquiline
mmpL5 775893 p.His863Pro missense_variant 0.33 clofazimine
bedaquiline
mmpL5 775895 p.Ile862Leu missense_variant 0.3 clofazimine
bedaquiline
mmpL5 775898 c.2583G>A synonymous_variant 0.27 clofazimine
bedaquiline
mmpL5 775904 c.2577G>A synonymous_variant 1.0 clofazimine
bedaquiline
mmpL5 775907 c.2572_2574delCTCinsTTG synonymous_variant 0.36 clofazimine
bedaquiline
mmpL5 775910 c.2571G>C synonymous_variant 0.27 clofazimine
bedaquiline
mmpL5 775913 p.Ala856Ser missense_variant 0.27 clofazimine
bedaquiline
mmpL5 775916 c.2565T>C synonymous_variant 0.8 clofazimine
bedaquiline
mmpL5 775919 p.Leu854Phe missense_variant 0.23 clofazimine
bedaquiline
mmpL5 775922 c.2557_2559delCTGinsTTA synonymous_variant 0.15 clofazimine
bedaquiline
mmpL5 775937 p.Ala848Ser missense_variant 0.12 clofazimine
bedaquiline
mmpL5 775940 c.2541C>T synonymous_variant 0.13 clofazimine
bedaquiline
mmpL5 775946 c.2535C>G synonymous_variant 0.19 clofazimine
bedaquiline
mmpL5 775951 c.2530C>T synonymous_variant 0.93 clofazimine
bedaquiline
mmpL5 775955 p.Ile842Val missense_variant 0.43 clofazimine
bedaquiline
mmpL5 775961 c.2520C>G synonymous_variant 0.21 clofazimine
bedaquiline
mmpL5 775964 p.Ala839Ser missense_variant 0.21 clofazimine
bedaquiline
mmpL5 775970 c.2511G>A synonymous_variant 0.67 clofazimine
bedaquiline
mmpL5 775973 p.Leu836Ile missense_variant 0.25 clofazimine
bedaquiline
mmpL5 775981 p.Leu834Met missense_variant 1.0 clofazimine
bedaquiline
mmpL5 775991 c.2490G>A synonymous_variant 0.4 clofazimine
bedaquiline
mmpL5 776009 c.2472A>G synonymous_variant 1.0 clofazimine
bedaquiline
mmpL5 776021 c.2460G>A synonymous_variant 0.33 clofazimine
bedaquiline
mmpL5 776030 c.2451G>C synonymous_variant 1.0 clofazimine
bedaquiline
rpsL 781682 c.123T>C synonymous_variant 1.0 streptomycin
rpsL 781709 c.150G>C synonymous_variant 1.0 streptomycin
rpsL 781715 c.156T>C synonymous_variant 1.0 streptomycin
rpsL 781728 c.169T>C synonymous_variant 1.0 streptomycin
rpsL 781751 c.192G>C synonymous_variant 1.0 streptomycin
rpsL 781760 c.201T>C synonymous_variant 1.0 streptomycin
rpsL 781772 c.213C>T synonymous_variant 1.0 streptomycin
rpsL 781808 c.249C>T synonymous_variant 1.0 streptomycin
rpsL 781814 c.255C>T synonymous_variant 1.0 streptomycin
rpsL 781817 c.258G>T synonymous_variant 1.0 streptomycin
rpsL 781829 c.270G>C synonymous_variant 1.0 streptomycin
rpsL 781832 c.273T>C synonymous_variant 1.0 streptomycin
rpsL 781838 c.279G>C synonymous_variant 1.0 streptomycin
rpsL 781841 c.282C>T synonymous_variant 1.0 streptomycin
rpsL 781859 c.300T>G synonymous_variant 1.0 streptomycin
rpsL 781865 c.306G>C synonymous_variant 1.0 streptomycin
rpsL 781868 c.309T>C synonymous_variant 1.0 streptomycin
rpsL 781871 c.312G>C synonymous_variant 1.0 streptomycin
rpsL 781892 c.333A>G synonymous_variant 1.0 streptomycin
rpsL 781898 c.339A>C synonymous_variant 1.0 streptomycin
rpsL 781901 c.342C>T synonymous_variant 1.0 streptomycin
rpsL 781907 c.348T>C synonymous_variant 1.0 streptomycin
rpsL 781916 c.357T>C synonymous_variant 1.0 streptomycin
rpsL 781929 p.Gly124Ser missense_variant 1.0 streptomycin Uncertain significance
rplC 800612 c.-197A>G upstream_gene_variant 1.0 linezolid
rplC 800618 c.-191T>C upstream_gene_variant 1.0 linezolid Uncertain significance
rplC 800633 c.-176T>C upstream_gene_variant 1.0 linezolid
rplC 800645 c.-164C>G upstream_gene_variant 1.0 linezolid
rplC 800648 c.-161A>G upstream_gene_variant 1.0 linezolid Uncertain significance
rplC 800654 c.-155T>C upstream_gene_variant 1.0 linezolid
rplC 800678 c.-131C>T upstream_gene_variant 1.0 linezolid
rplC 800684 c.-125G>A upstream_gene_variant 1.0 linezolid
rplC 800693 c.-116A>C upstream_gene_variant 1.0 linezolid
rplC 800702 c.-107G>A upstream_gene_variant 1.0 linezolid
rplC 800703 c.-106T>C upstream_gene_variant 1.0 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 1.0 linezolid
rplC 800720 c.-89T>C upstream_gene_variant 1.0 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 1.0 linezolid
rplC 800735 c.-74C>G upstream_gene_variant 1.0 linezolid
fbiC 1304559 p.Glu543Asp missense_variant 1.0 delamanid
fbiC 1304562 c.1632G>C synonymous_variant 1.0 delamanid
fbiC 1304567 p.Phe546Tyr missense_variant 1.0 delamanid
fbiC 1304571 c.1641G>C synonymous_variant 1.0 delamanid
fbiC 1304580 c.1650T>C synonymous_variant 1.0 delamanid
fbiC 1304613 c.1683T>C synonymous_variant 1.0 delamanid
fbiC 1304634 c.1704C>G synonymous_variant 1.0 delamanid
fbiC 1304640 c.1710A>C synonymous_variant 1.0 delamanid
fbiC 1304646 c.1716T>C synonymous_variant 1.0 delamanid
fbiC 1304670 c.1740G>C synonymous_variant 1.0 delamanid
fbiC 1304671 p.Val581Thr missense_variant 1.0 delamanid
fbiC 1304675 p.Gly582Asp missense_variant 1.0 delamanid
fbiC 1304694 c.1764A>G synonymous_variant 1.0 delamanid
fbiC 1304715 c.1785G>T synonymous_variant 1.0 delamanid
fbiC 1304724 c.1794A>G synonymous_variant 1.0 delamanid
fbiC 1304727 c.1797A>C synonymous_variant 1.0 delamanid
fbiC 1304742 c.1812T>C synonymous_variant 1.0 delamanid
fbiC 1304751 c.1821C>G synonymous_variant 1.0 delamanid
rrs 1471922 n.78delT non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1471931 n.87delA non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.92 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472846 n.1001C>A non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.93 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.93 linezolid
kanamycin
capreomycin
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1472861 n.1016G>T non_coding_transcript_exon_variant 0.93 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin Uncertain significance
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
aminoglycosides
streptomycin
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 1.0 linezolid
kanamycin
capreomycin
amikacin
aminoglycosides
streptomycin
rrl 1473717 n.60G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473807 n.150T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473811 n.154_155insT non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473814 n.158delT non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473823 n.166T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473829 n.172G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473832 n.175C>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473922 n.265A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473935 n.278C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473937 n.280C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474053 n.396G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474091 n.434C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474096 n.439C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474102 n.446_449delAGTA non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474108 n.451C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474110 n.453_454insCGGTG non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474266 n.609T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1474292 n.635T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474294 n.638_649delCTCTCCGGAGGA non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474417 n.762_765delACGC non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474439 n.782A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474629 n.972G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474639 n.982G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474710 n.1053T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474711 n.1054G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474712 n.1055G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474713 n.1056T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475353 n.1696A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475354 n.1697A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1475363 n.1706C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475379 n.1722G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475380 n.1723C>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475381 n.1724G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475382 n.1725A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475395 n.1738T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475398 n.1741C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475403 n.1746T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475404 n.1747A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.94 linezolid
rrl 1475429 n.1772G>T non_coding_transcript_exon_variant 0.9 linezolid
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.97 linezolid
rrl 1475479 n.1822C>G non_coding_transcript_exon_variant 0.97 linezolid
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.96 linezolid
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475602 n.1945G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475603 n.1946G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475609 n.1952C>T non_coding_transcript_exon_variant 0.1 linezolid
rrl 1475612 n.1955G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475615 n.1958C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475616 n.1959A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475618 n.1961C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475629 n.1972G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475637 n.1980T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475638 n.1981C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475639 n.1982C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475643 n.1986C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475647 n.1990G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475753 n.2096C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475775 n.2118G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476033 n.2376T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.98 linezolid
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476540 n.2883C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 1.0 linezolid Uncertain significance
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 1.0 linezolid
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 1.0 linezolid
inhA 1673865 c.-337C>G upstream_gene_variant 1.0 ethionamide
isoniazid
fabG1 1673870 p.Ser144Met missense_variant 1.0 ethionamide
isoniazid
inhA 1673877 c.-325C>G upstream_gene_variant 1.0 ethionamide
isoniazid
fabG1 1673905 p.Ser156Ala missense_variant 1.0 ethionamide
isoniazid
inhA 1674846 p.Ile215Met missense_variant 0.7 ethionamide
isoniazid
inhA 1674855 c.654C>G synonymous_variant 0.7 ethionamide
isoniazid
inhA 1674858 c.657G>A synonymous_variant 0.67 ethionamide
isoniazid
inhA 1674876 c.675C>T synonymous_variant 0.64 ethionamide
isoniazid
inhA 1674879 c.678T>G synonymous_variant 0.64 ethionamide
isoniazid
rpsA 1833554 p.Thr5Ser missense_variant 1.0 pyrazinamide
rpsA 1833589 c.48A>C synonymous_variant 1.0 pyrazinamide
rpsA 1833595 c.54T>G synonymous_variant 1.0 pyrazinamide
rpsA 1833596 p.Ser19Ala missense_variant 1.0 pyrazinamide
rpsA 1833616 c.75A>C synonymous_variant 1.0 pyrazinamide
rpsA 1833619 c.78A>C synonymous_variant 1.0 pyrazinamide
rpsA 1833628 c.87G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833634 c.93G>A synonymous_variant 1.0 pyrazinamide
rpsA 1833661 c.120A>G synonymous_variant 1.0 pyrazinamide
rpsA 1833664 c.123C>A synonymous_variant 1.0 pyrazinamide
rpsA 1833676 c.135A>G synonymous_variant 1.0 pyrazinamide
rpsA 1833679 c.138G>T synonymous_variant 1.0 pyrazinamide
rpsA 1833685 c.144G>T synonymous_variant 1.0 pyrazinamide
rpsA 1833694 c.153G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833697 c.156C>G synonymous_variant 1.0 pyrazinamide
rpsA 1833703 c.162C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833709 c.168C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833724 c.183C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833730 c.189C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833733 c.192C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833734 p.Ala65Ser missense_variant 1.0 pyrazinamide
rpsA 1833745 c.204G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833787 c.246C>G synonymous_variant 1.0 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 1.0 pyrazinamide
rpsA 1833793 c.252C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 1.0 pyrazinamide
rpsA 1833808 c.267G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833811 c.270G>T synonymous_variant 1.0 pyrazinamide
rpsA 1833829 c.288A>G synonymous_variant 1.0 pyrazinamide
rpsA 1833832 c.291G>A synonymous_variant 1.0 pyrazinamide
rpsA 1833838 c.297G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 1.0 pyrazinamide
rpsA 1833847 c.306C>G synonymous_variant 1.0 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 1.0 pyrazinamide
rpsA 1833862 c.321G>T synonymous_variant 1.0 pyrazinamide
rpsA 1833894 p.Ala118Glu missense_variant 1.0 pyrazinamide
rpsA 1833904 c.363G>A synonymous_variant 1.0 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 1.0 pyrazinamide
rpsA 1833949 c.408T>C synonymous_variant 1.0 pyrazinamide
rpsA 1833970 c.429G>T synonymous_variant 1.0 pyrazinamide
rpsA 1833976 c.435C>T synonymous_variant 1.0 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 1.0 pyrazinamide
rpsA 1833991 c.450C>A synonymous_variant 1.0 pyrazinamide
rpsA 1834000 c.459G>C synonymous_variant 1.0 pyrazinamide
rpsA 1834009 c.468C>T synonymous_variant 1.0 pyrazinamide
rpsA 1834012 c.471G>T synonymous_variant 1.0 pyrazinamide
rpsA 1834015 c.474G>C synonymous_variant 1.0 pyrazinamide
rpsA 1834021 c.480C>T synonymous_variant 1.0 pyrazinamide
rpsA 1834030 c.489C>G synonymous_variant 1.0 pyrazinamide
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.86 pyrazinamide
rpsA 1834102 c.561T>C synonymous_variant 0.87 pyrazinamide
rpsA 1834150 c.609G>C synonymous_variant 0.83 pyrazinamide
rpsA 1834153 c.612T>C synonymous_variant 0.83 pyrazinamide
rpsA 1834154 p.Asn205Gln missense_variant 0.83 pyrazinamide
rpsA 1834157 c.616T>C synonymous_variant 0.83 pyrazinamide
rpsA 1834162 c.621A>G synonymous_variant 0.83 pyrazinamide
rpsA 1834165 c.624A>G synonymous_variant 0.83 pyrazinamide
rpsA 1834168 c.627C>T synonymous_variant 0.83 pyrazinamide
rpsA 1834169 p.Thr210Ala missense_variant 0.83 pyrazinamide
rpsA 1834177 c.636A>C synonymous_variant 0.83 pyrazinamide
rpsA 1834189 c.648G>C synonymous_variant 0.83 pyrazinamide
rpsA 1834213 c.672G>C synonymous_variant 0.82 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834279 c.738C>T synonymous_variant 0.9 pyrazinamide
rpsA 1834297 c.756C>T synonymous_variant 0.9 pyrazinamide
rpsA 1834303 c.762T>G synonymous_variant 0.82 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.82 pyrazinamide
rpsA 1834345 c.804C>T synonymous_variant 0.79 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.79 pyrazinamide
rpsA 1834361 c.820T>C synonymous_variant 0.81 pyrazinamide
rpsA 1834366 c.825A>G synonymous_variant 0.81 pyrazinamide
rpsA 1834396 c.855G>C synonymous_variant 0.83 pyrazinamide
rpsA 1834411 c.870T>C synonymous_variant 0.86 pyrazinamide
rpsA 1834423 c.882G>T synonymous_variant 0.79 pyrazinamide
rpsA 1834451 c.910T>C synonymous_variant 0.87 pyrazinamide
rpsA 1834456 c.915T>G synonymous_variant 0.87 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 1.0 pyrazinamide
rpsA 1834498 c.957C>T synonymous_variant 1.0 pyrazinamide
rpsA 1834513 c.972C>G synonymous_variant 1.0 pyrazinamide
rpsA 1834520 p.Ala327Ser missense_variant 1.0 pyrazinamide
rpsA 1834528 c.987T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834540 c.999G>C synonymous_variant 1.0 pyrazinamide
rpsA 1834543 c.1002C>G synonymous_variant 1.0 pyrazinamide
rpsA 1834546 c.1005T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834554 c.1014_1015delTG frameshift_variant 1.0 pyrazinamide
rpsA 1834558 c.1017_1018insAG frameshift_variant 1.0 pyrazinamide
rpsA 1834606 c.1065C>T synonymous_variant 1.0 pyrazinamide
rpsA 1834609 c.1068T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834619 c.1078T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 1.0 pyrazinamide
rpsA 1834633 c.1092A>G synonymous_variant 1.0 pyrazinamide
rpsA 1834639 c.1098T>C synonymous_variant 1.0 pyrazinamide
rpsA 1834732 c.1191T>C synonymous_variant 1.0 pyrazinamide
kasA 2517916 c.-199T>C upstream_gene_variant 0.15 isoniazid
kasA 2517941 c.-174C>G upstream_gene_variant 1.0 isoniazid
kasA 2517959 c.-156C>T upstream_gene_variant 1.0 isoniazid
kasA 2517962 c.-153C>G upstream_gene_variant 1.0 isoniazid
kasA 2517968 c.-147T>C upstream_gene_variant 1.0 isoniazid
kasA 2517974 c.-141T>C upstream_gene_variant 1.0 isoniazid
kasA 2517980 c.-135C>T upstream_gene_variant 1.0 isoniazid
kasA 2518636 c.522C>A synonymous_variant 0.82 isoniazid
kasA 2518639 c.525G>T synonymous_variant 0.82 isoniazid
kasA 2518642 c.528A>G synonymous_variant 0.82 isoniazid
kasA 2518645 c.531G>C synonymous_variant 0.82 isoniazid
kasA 2518656 p.Ala181Gly missense_variant 0.82 isoniazid
kasA 2518663 c.549T>C synonymous_variant 0.82 isoniazid
kasA 2518672 c.558G>C synonymous_variant 0.82 isoniazid
kasA 2518684 c.570C>G synonymous_variant 0.92 isoniazid
kasA 2518688 p.Val192Phe missense_variant 0.92 isoniazid
kasA 2518697 p.Cys195Val missense_variant 0.92 isoniazid
kasA 2518708 c.594C>G synonymous_variant 1.0 isoniazid
kasA 2518714 c.600A>C synonymous_variant 1.0 isoniazid
kasA 2518715 p.Pro201Gly missense_variant 1.0 isoniazid
kasA 2518726 c.612G>A synonymous_variant 1.0 isoniazid
kasA 2518732 c.618C>G synonymous_variant 1.0 isoniazid
kasA 2518747 c.633C>G synonymous_variant 1.0 isoniazid
kasA 2518756 c.642G>C synonymous_variant 1.0 isoniazid
Rv2752c 3065126 p.Ser356Ala missense_variant 0.9 rifampicin
isoniazid
Rv2752c 3065130 c.1062A>G synonymous_variant 0.9 rifampicin
isoniazid
Rv2752c 3065133 c.1059T>C synonymous_variant 0.9 rifampicin
isoniazid
rpoA 3877686 c.822A>G synonymous_variant 0.8 rifampicin
rpoA 3877695 c.813C>G synonymous_variant 0.8 rifampicin
rpoA 3877704 c.804G>T synonymous_variant 0.82 rifampicin
rpoA 3877728 c.780C>G synonymous_variant 0.82 rifampicin
rpoA 3877731 c.777G>T synonymous_variant 0.82 rifampicin
rpoA 3877734 c.774G>C synonymous_variant 0.83 rifampicin
rpoA 3877737 c.771G>C synonymous_variant 0.85 rifampicin
rpoA 3877743 c.765T>C synonymous_variant 0.85 rifampicin
rpoA 3877749 c.759C>T synonymous_variant 0.86 rifampicin
rpoA 3877764 c.744C>G synonymous_variant 0.85 rifampicin
rpoA 3877776 c.732T>C synonymous_variant 0.85 rifampicin
rpoA 3877782 c.726T>C synonymous_variant 0.92 rifampicin
rpoA 3877785 c.723C>A synonymous_variant 0.92 rifampicin
rpoA 3877818 c.690A>G synonymous_variant 1.0 rifampicin
rpoA 3877848 c.660C>T synonymous_variant 1.0 rifampicin
rpoA 3877856 c.652T>C synonymous_variant 1.0 rifampicin
rpoA 3877857 c.651G>A synonymous_variant 1.0 rifampicin
rpoA 3877866 c.642G>C synonymous_variant 1.0 rifampicin
rpoA 3877875 c.633T>A synonymous_variant 1.0 rifampicin
rpoA 3877878 c.630G>C synonymous_variant 1.0 rifampicin
rpoA 3877887 c.621G>C synonymous_variant 1.0 rifampicin
rpoA 3877893 c.615C>T synonymous_variant 1.0 rifampicin
rpoA 3877905 c.603A>G synonymous_variant 1.0 rifampicin
rpoA 3877908 c.600T>C synonymous_variant 1.0 rifampicin
rpoA 3877920 c.588G>C synonymous_variant 1.0 rifampicin
rpoA 3877926 c.582G>C synonymous_variant 1.0 rifampicin
rpoA 3877962 c.546G>T synonymous_variant 1.0 rifampicin
rpoA 3877986 c.522G>C synonymous_variant 1.0 rifampicin
rpoA 3877989 c.519A>G synonymous_variant 1.0 rifampicin
rpoA 3877995 c.513G>C synonymous_variant 1.0 rifampicin
rpoA 3878001 c.507A>G synonymous_variant 1.0 rifampicin
rpoA 3878019 c.489A>G synonymous_variant 1.0 rifampicin
rpoA 3878022 c.486T>C synonymous_variant 1.0 rifampicin
rpoA 3878025 c.483C>T synonymous_variant 1.0 rifampicin
rpoA 3878028 c.480G>C synonymous_variant 1.0 rifampicin
rpoA 3878031 c.477T>C synonymous_variant 1.0 rifampicin
rpoA 3878034 c.474A>G synonymous_variant 1.0 rifampicin
rpoA 3878040 c.468T>C synonymous_variant 1.0 rifampicin
rpoA 3878046 c.462T>G synonymous_variant 1.0 rifampicin
rpoA 3878050 p.Arg153Lys missense_variant 1.0 rifampicin
rpoA 3878055 c.453A>G synonymous_variant 1.0 rifampicin
rpoA 3878061 c.447G>A synonymous_variant 1.0 rifampicin
rpoA 3878070 c.438T>C synonymous_variant 1.0 rifampicin
rpoA 3878082 c.426T>C synonymous_variant 1.0 rifampicin
rpoA 3878103 c.405A>G synonymous_variant 1.0 rifampicin
rpoA 3878118 c.390T>C synonymous_variant 1.0 rifampicin
rpoA 3878127 c.381G>C synonymous_variant 1.0 rifampicin
rpoA 3878143 p.Gly122Asp missense_variant 0.95 rifampicin Uncertain significance
rpoA 3878145 c.363C>G synonymous_variant 0.95 rifampicin
rpoA 3878160 c.348C>G synonymous_variant 1.0 rifampicin
rpoA 3878163 c.345C>T synonymous_variant 1.0 rifampicin
rpoA 3878187 c.321C>A synonymous_variant 1.0 rifampicin
rpoA 3878193 c.315T>C synonymous_variant 1.0 rifampicin
rpoA 3878197 p.Glu104Ala missense_variant 1.0 rifampicin
rpoA 3878205 c.303T>C synonymous_variant 1.0 rifampicin
rpoA 3878217 c.291A>G synonymous_variant 1.0 rifampicin
rpoA 3878238 c.270C>T synonymous_variant 1.0 rifampicin
clpC1 4038596 c.2109A>G synonymous_variant 0.8 pyrazinamide
clpC1 4038602 c.2103G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038623 c.2082A>G synonymous_variant 1.0 pyrazinamide
clpC1 4038671 c.2034T>G synonymous_variant 1.0 pyrazinamide
clpC1 4038679 p.Pro676Ala missense_variant 1.0 pyrazinamide
clpC1 4038683 c.2022T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038692 c.2013C>T synonymous_variant 1.0 pyrazinamide
clpC1 4038695 c.2010C>G synonymous_variant 1.0 pyrazinamide
clpC1 4038704 c.2001T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038710 c.1995G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038713 c.1992T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038725 c.1980C>G synonymous_variant 0.95 pyrazinamide
clpC1 4038740 c.1965G>C synonymous_variant 1.0 pyrazinamide
clpC1 4038755 c.1950G>C synonymous_variant 0.9 pyrazinamide
clpC1 4038767 c.1938G>T synonymous_variant 0.9 pyrazinamide
clpC1 4038770 c.1935C>T synonymous_variant 0.9 pyrazinamide
clpC1 4038773 c.1932T>C synonymous_variant 0.9 pyrazinamide
clpC1 4038776 c.1929G>A synonymous_variant 0.9 pyrazinamide
clpC1 4038779 c.1926C>G synonymous_variant 0.9 pyrazinamide
clpC1 4038782 c.1923G>C synonymous_variant 0.9 pyrazinamide
clpC1 4038790 c.1915C>T synonymous_variant 0.9 pyrazinamide
clpC1 4038812 c.1893T>C synonymous_variant 0.85 pyrazinamide
clpC1 4038815 c.1890G>C synonymous_variant 0.89 pyrazinamide
clpC1 4038842 c.1863G>C synonymous_variant 0.76 pyrazinamide
clpC1 4038860 c.1845G>C synonymous_variant 0.73 pyrazinamide
clpC1 4038878 c.1827A>G synonymous_variant 0.79 pyrazinamide
clpC1 4038890 c.1815G>A synonymous_variant 0.85 pyrazinamide
clpC1 4038905 c.1800A>G synonymous_variant 0.83 pyrazinamide
clpC1 4038908 c.1797C>G synonymous_variant 0.83 pyrazinamide
clpC1 4038911 c.1794G>T synonymous_variant 0.83 pyrazinamide
clpC1 4038914 c.1791G>C synonymous_variant 0.83 pyrazinamide
clpC1 4038917 c.1788C>T synonymous_variant 0.85 pyrazinamide
clpC1 4038923 c.1782A>G synonymous_variant 0.88 pyrazinamide
clpC1 4038941 c.1764G>C synonymous_variant 0.88 pyrazinamide
clpC1 4038953 c.1752A>G synonymous_variant 0.88 pyrazinamide
clpC1 4038956 c.1749T>C synonymous_variant 0.88 pyrazinamide
clpC1 4038965 c.1740T>C synonymous_variant 0.89 pyrazinamide
clpC1 4038971 c.1734T>C synonymous_variant 0.94 pyrazinamide
clpC1 4038974 c.1731T>C synonymous_variant 0.94 pyrazinamide
clpC1 4038989 c.1716T>C synonymous_variant 1.0 pyrazinamide
clpC1 4038997 c.1708T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039022 c.1683A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039046 c.1659C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039064 c.1641C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039067 c.1638G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039079 c.1626C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039085 c.1620A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039091 c.1614G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039097 c.1608G>T synonymous_variant 1.0 pyrazinamide
clpC1 4039100 c.1605C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039103 c.1602T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039106 c.1599G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039118 c.1587C>A synonymous_variant 1.0 pyrazinamide
clpC1 4039136 c.1569C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039142 c.1563A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039145 c.1560G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039169 c.1536A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039178 c.1527G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039183 c.1522T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039187 c.1518G>T synonymous_variant 1.0 pyrazinamide
clpC1 4039190 c.1515C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039274 c.1431G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039286 c.1419T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039295 c.1410A>C synonymous_variant 1.0 pyrazinamide
clpC1 4039298 c.1407T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039310 c.1395A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039313 c.1392C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039320 p.Ala462Gly missense_variant 1.0 pyrazinamide
clpC1 4039322 c.1383T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039328 c.1377A>C synonymous_variant 1.0 pyrazinamide
clpC1 4039337 p.Thr456Gln missense_variant 1.0 pyrazinamide
clpC1 4039352 c.1353C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039361 c.1344C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039382 c.1323C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039391 c.1314T>G synonymous_variant 1.0 pyrazinamide
clpC1 4039394 c.1311G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039397 c.1308A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039409 c.1296T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039412 c.1293T>G synonymous_variant 1.0 pyrazinamide
clpC1 4039415 p.Glu430Asp missense_variant 1.0 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039517 c.1188C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039724 c.981A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039733 c.972G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039742 c.963C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039748 c.957G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039751 c.954A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039757 c.948A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039760 c.945T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039769 c.936C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039778 c.927A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039784 c.921C>T synonymous_variant 1.0 pyrazinamide
clpC1 4039793 c.912C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039802 c.903G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039817 c.888A>T synonymous_variant 1.0 pyrazinamide
clpC1 4039820 c.885T>G synonymous_variant 1.0 pyrazinamide
clpC1 4039823 c.882T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 1.0 pyrazinamide
clpC1 4039832 c.873C>A synonymous_variant 1.0 pyrazinamide
clpC1 4039850 c.855T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039865 c.840T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039883 c.822G>A synonymous_variant 1.0 pyrazinamide
clpC1 4039889 c.816G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039898 c.807C>G synonymous_variant 1.0 pyrazinamide
clpC1 4039904 c.801A>G synonymous_variant 1.0 pyrazinamide
clpC1 4039931 c.774T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039934 c.771G>A synonymous_variant 1.0 pyrazinamide
clpC1 4039937 c.768G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039946 c.759A>T synonymous_variant 1.0 pyrazinamide
clpC1 4039949 c.756G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039952 c.753T>C synonymous_variant 1.0 pyrazinamide
clpC1 4039958 c.747G>C synonymous_variant 1.0 pyrazinamide
clpC1 4039991 c.714G>C synonymous_variant 1.0 pyrazinamide
clpC1 4040003 c.702G>C synonymous_variant 1.0 pyrazinamide
clpC1 4040021 c.684A>C synonymous_variant 1.0 pyrazinamide
clpC1 4040024 c.681A>G synonymous_variant 1.0 pyrazinamide
clpC1 4040033 c.672G>C synonymous_variant 1.0 pyrazinamide
clpC1 4040042 c.663C>T synonymous_variant 1.0 pyrazinamide
clpC1 4040366 c.339C>T synonymous_variant 1.0 pyrazinamide
clpC1 4040369 c.336C>G synonymous_variant 1.0 pyrazinamide
clpC1 4040375 c.330G>C synonymous_variant 1.0 pyrazinamide
clpC1 4040380 c.325T>C synonymous_variant 1.0 pyrazinamide
clpC1 4040387 c.318A>G synonymous_variant 1.0 pyrazinamide
clpC1 4040411 c.294T>C synonymous_variant 1.0 pyrazinamide
clpC1 4040423 c.282A>G synonymous_variant 1.0 pyrazinamide
clpC1 4040431 c.274T>C synonymous_variant 1.0 pyrazinamide
clpC1 4040495 c.210C>G synonymous_variant 1.0 pyrazinamide
clpC1 4040522 c.183T>C synonymous_variant 1.0 pyrazinamide
clpC1 4040531 c.174T>C synonymous_variant 1.0 pyrazinamide
embB 4247491 c.978G>C synonymous_variant 1.0 ethambutol
embB 4247497 c.984T>C synonymous_variant 1.0 ethambutol
embB 4247511 p.Tyr333Phe missense_variant 1.0 ethambutol
embB 4247527 c.1014G>C synonymous_variant 1.0 ethambutol
embB 4247536 c.1023C>G synonymous_variant 1.0 ethambutol
embB 4248085 c.1572T>C synonymous_variant 0.75 ethambutol
embB 4248088 c.1575C>T synonymous_variant 0.75 ethambutol
embB 4248097 c.1584C>G synonymous_variant 0.75 ethambutol
embB 4248112 c.1599C>G synonymous_variant 0.76 ethambutol
embB 4248118 c.1605T>C synonymous_variant 0.78 ethambutol
embB 4248130 c.1617G>C synonymous_variant 0.76 ethambutol
embB 4248133 c.1620C>G synonymous_variant 0.76 ethambutol
embB 4248142 c.1629T>C synonymous_variant 0.76 ethambutol
embB 4248143 p.Leu544Ile missense_variant 0.76 ethambutol
embB 4248157 c.1644A>G synonymous_variant 0.8 ethambutol
embB 4248158 p.Cys549Ser missense_variant 0.8 ethambutol
embB 4248167 p.Thr552Ala missense_variant 0.82 ethambutol
embB 4248170 p.Ala553Ser missense_variant 0.82 ethambutol
embB 4248173 p.Val554Leu missense_variant 0.83 ethambutol
embB 4248199 c.1686A>G synonymous_variant 0.91 ethambutol
embB 4248200 p.Ile563Val missense_variant 0.91 ethambutol
embB 4248205 c.1692C>G synonymous_variant 0.9 ethambutol
embB 4248206 p.Ser565Gly missense_variant 0.9 ethambutol Uncertain significance
embB 4248220 c.1707A>G synonymous_variant 0.89 ethambutol
embB 4248225 p.Ala571Val missense_variant 0.89 ethambutol
embB 4248233 c.1720C>T synonymous_variant 0.92 ethambutol
embB 4248242 p.Val577Ile missense_variant 0.92 ethambutol